RNA–Protein interactions for RNA: ENST00000458707.1

VPS50-208, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 1,898 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-208ENST00000458707 HSD17B3P37058 310 aa9.3□□□□□ -0.92
VPS50-208ENST00000458707 PBX2P40425 430 aa9.3□□□□□ -0.92
VPS50-208ENST00000458707 USP11P51784 963 aa9.3□□□□□ -0.92
VPS50-208ENST00000458707 SEC24CP53992 1094 aa9.3□□□□□ -0.92
VPS50-208ENST00000458707 POLR2FP61218 127 aaKnown RBP9.3□□□□□ -0.92
VPS50-208ENST00000458707 RPS8P62241 208 aaKnown RBP9.3□□□□□ -0.92
VPS50-208ENST00000458707 ERVK-9P63128 1117 aa9.3□□□□□ -0.92
VPS50-208ENST00000458707 COASYQ13057 564 aa9.3□□□□□ -0.92
VPS50-208ENST00000458707 BIRC2Q13490 618 aa9.3□□□□□ -0.92
VPS50-208ENST00000458707 TRADDQ15628 312 aa9.3□□□□□ -0.92
VPS50-208ENST00000458707 UAP1Q16222 522 aaPredicted RBP9.3□□□□□ -0.92
VPS50-208ENST00000458707 KIAA0753Q2KHM9 967 aa9.3□□□□□ -0.92
VPS50-208ENST00000458707 CCDC40Q4G0X9 1142 aa9.3□□□□□ -0.92
VPS50-208ENST00000458707 CEP85LQ5SZL2 805 aa9.3□□□□□ -0.92
VPS50-208ENST00000458707 HYIQ5T013 277 aa9.3□□□□□ -0.92
VPS50-208ENST00000458707 AGBL2Q5U5Z8 902 aa9.3□□□□□ -0.92
VPS50-208ENST00000458707 KCNK18Q7Z418 384 aa9.3□□□□□ -0.92
VPS50-208ENST00000458707 NEDD1Q8NHV4 660 aa9.3□□□□□ -0.92
VPS50-208ENST00000458707 SH3RF3Q8TEJ3 882 aaPredicted RBP9.3□□□□□ -0.92
VPS50-208ENST00000458707 TANGO6Q9C0B7 1094 aa9.3□□□□□ -0.92
VPS50-208ENST00000458707 ACTR5Q9H9F9 607 aaPredicted RBP9.3□□□□□ -0.92
VPS50-208ENST00000458707 ZNF287Q9HBT7 754 aa9.3□□□□□ -0.92
VPS50-208ENST00000458707 BIN2Q9UBW5 565 aaPredicted RBP9.3□□□□□ -0.92
VPS50-208ENST00000458707 SEC63Q9UGP8 760 aaKnown RBP9.3□□□□□ -0.92
VPS50-208ENST00000458707 MYH11P35749 1972 aa9.3□□□□□ -0.92
VPS50-208ENST00000458707 C5orf60A6NFR6 353 aa9.3□□□□□ -0.92
VPS50-208ENST00000458707 GOLGA6L10A6NI86 522 aa9.3□□□□□ -0.92
VPS50-208ENST00000458707 H0YHG0 523 aa9.3□□□□□ -0.92
VPS50-208ENST00000458707 GCOM1H8Y6P7 765 aaPredicted RBP9.3□□□□□ -0.92
VPS50-208ENST00000458707 TRAF5O00463 557 aa9.3□□□□□ -0.92
VPS50-208ENST00000458707 TRAPPC3O43617 180 aa9.3□□□□□ -0.92
VPS50-208ENST00000458707 SLC37A4O43826 429 aa9.3□□□□□ -0.92
VPS50-208ENST00000458707 MYZAPP0CAP1 466 aa9.3□□□□□ -0.92
VPS50-208ENST00000458707 LSM11P83369 360 aaKnown RBP eCLIP9.3□□□□□ -0.92
VPS50-208ENST00000458707 LRRC41Q15345 812 aa9.3□□□□□ -0.92
VPS50-208ENST00000458707 SLC4A8Q2Y0W8 1093 aa9.3□□□□□ -0.92
VPS50-208ENST00000458707 KRT79Q5XKE5 535 aa9.3□□□□□ -0.92
VPS50-208ENST00000458707 DPY19L2P1Q6NXN4 242 aa9.3□□□□□ -0.92
VPS50-208ENST00000458707 RUFY4Q6ZNE9 571 aa9.3□□□□□ -0.92
VPS50-208ENST00000458707 LRRC57Q8N9N7 239 aa9.3□□□□□ -0.92
VPS50-208ENST00000458707 SLC44A5Q8NCS7 719 aa9.3□□□□□ -0.92
VPS50-208ENST00000458707 SNX29Q8TEQ0 813 aa9.3□□□□□ -0.92
VPS50-208ENST00000458707 SEC14L1Q92503 715 aa9.3□□□□□ -0.92
VPS50-208ENST00000458707 CYFIP2Q96F07 1278 aa9.3□□□□□ -0.92
VPS50-208ENST00000458707 NUDT12Q9BQG2 462 aa9.3□□□□□ -0.92
VPS50-208ENST00000458707 PACSIN1Q9BY11 444 aa9.3□□□□□ -0.92
VPS50-208ENST00000458707 CPVLQ9H3G5 476 aa9.3□□□□□ -0.92
VPS50-208ENST00000458707 TMEM260Q9NX78 707 aa9.3□□□□□ -0.92
VPS50-208ENST00000458707 TFCP2L1Q9NZI6 479 aa9.3□□□□□ -0.92
VPS50-208ENST00000458707 NENFQ9UMX5 172 aa9.3□□□□□ -0.92
VPS50-208ENST00000458707 PACSIN2Q9UNF0 486 aaPredicted RBP9.3□□□□□ -0.92
VPS50-208ENST00000458707 PCDHA2Q9Y5H9 948 aa9.3□□□□□ -0.92
VPS50-208ENST00000458707 GMNCA6NCL1 334 aa9.29□□□□□ -0.92
VPS50-208ENST00000458707 E7EVH7 732 aa9.29□□□□□ -0.92
VPS50-208ENST00000458707 CCDC188H7C350 402 aa9.29□□□□□ -0.92
VPS50-208ENST00000458707 CHUKO15111 745 aa9.29□□□□□ -0.92
VPS50-208ENST00000458707 SLC26A4O43511 780 aa9.29□□□□□ -0.92
VPS50-208ENST00000458707 BAG3O95817 575 aa9.29□□□□□ -0.92
VPS50-208ENST00000458707 ANXA13P27216 316 aa9.29□□□□□ -0.92
VPS50-208ENST00000458707 GSTO1P78417 241 aa9.29□□□□□ -0.92
VPS50-208ENST00000458707 ZNF844Q08AG5 666 aa9.29□□□□□ -0.92
VPS50-208ENST00000458707 KLHL30Q0D2K2 578 aa9.29□□□□□ -0.92
VPS50-208ENST00000458707 MTMR3Q13615 1198 aa9.29□□□□□ -0.92
VPS50-208ENST00000458707 RAPGEF1Q13905 1077 aa9.29□□□□□ -0.92
VPS50-208ENST00000458707 RPS6KA1Q15418 735 aa9.29□□□□□ -0.92
VPS50-208ENST00000458707 ASIC2Q16515 512 aa9.29□□□□□ -0.92
VPS50-208ENST00000458707 IFI16Q16666 785 aaKnown RBP9.29□□□□□ -0.92
VPS50-208ENST00000458707 FAM26FQ5R3K3 315 aa9.29□□□□□ -0.92
VPS50-208ENST00000458707 C16orf86Q6ZW13 317 aa9.29□□□□□ -0.92
VPS50-208ENST00000458707 ARMC9Q7Z3E5 817 aa9.29□□□□□ -0.92
VPS50-208ENST00000458707 MAATS1Q7Z4T9 603 aa9.29□□□□□ -0.92
VPS50-208ENST00000458707 IRF2BP2Q7Z5L9 587 aa9.29□□□□□ -0.92
VPS50-208ENST00000458707 SLFN11Q7Z7L1 901 aa9.29□□□□□ -0.92
VPS50-208ENST00000458707 GPIHBP1Q8IV16 184 aa9.29□□□□□ -0.92
VPS50-208ENST00000458707 CCDC13Q8IYE1 715 aa9.29□□□□□ -0.92
VPS50-208ENST00000458707 RASGEF1CQ8N431 466 aa9.29□□□□□ -0.92
VPS50-208ENST00000458707 WDR66Q8TBY9 1149 aa9.29□□□□□ -0.92
VPS50-208ENST00000458707 TAF4BQ92750 862 aa9.29□□□□□ -0.92
VPS50-208ENST00000458707 PIGSQ96S52 555 aa9.29□□□□□ -0.92
VPS50-208ENST00000458707 KCTD10Q9H3F6 313 aa9.29□□□□□ -0.92
VPS50-208ENST00000458707 KLC4Q9NSK0 619 aa9.29□□□□□ -0.92
VPS50-208ENST00000458707 ADAMTS1Q9UHI8 967 aa9.29□□□□□ -0.92
VPS50-208ENST00000458707 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.29□□□□□ -0.92
VPS50-208ENST00000458707 BZW2Q9Y6E2 419 aaKnown RBP9.29□□□□□ -0.92
VPS50-208ENST00000458707 LOXHD1Q8IVV2 1947 aa9.28□□□□□ -0.92
VPS50-208ENST00000458707 KCNK3O14649 394 aa9.28□□□□□ -0.92
VPS50-208ENST00000458707 TDP2O95551 362 aa9.28□□□□□ -0.92
VPS50-208ENST00000458707 LDHBP07195 334 aaKnown RBP9.28□□□□□ -0.92
VPS50-208ENST00000458707 MAP2K2P36507 400 aa9.28□□□□□ -0.92
VPS50-208ENST00000458707 PRKCIP41743 596 aa9.28□□□□□ -0.92
VPS50-208ENST00000458707 INHBEP58166 350 aa9.28□□□□□ -0.92
VPS50-208ENST00000458707 IFT88Q13099 833 aa9.28□□□□□ -0.92
VPS50-208ENST00000458707 ECM1Q16610 540 aa9.28□□□□□ -0.92
VPS50-208ENST00000458707 EDRF1Q3B7T1 1238 aa9.28□□□□□ -0.92
VPS50-208ENST00000458707 SPDYCQ5MJ68 293 aa9.28□□□□□ -0.92
VPS50-208ENST00000458707 C1QTNF12Q5T7M4 302 aa9.28□□□□□ -0.92
VPS50-208ENST00000458707 USP17L2Q6R6M4 530 aa9.28□□□□□ -0.92
VPS50-208ENST00000458707 TXNRD3Q86VQ6 643 aa9.28□□□□□ -0.92
VPS50-208ENST00000458707 KLHL7Q8IXQ5 586 aa9.28□□□□□ -0.92
VPS50-208ENST00000458707 FAM133AQ8N9E0 248 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms