RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 EIF2AK2P19525 551 aaKnown RBP9.98□□□□□ -0.81
VPS50-207ENST00000458530 RPA1P27694 616 aa9.98□□□□□ -0.81
VPS50-207ENST00000458530 ERCC5P28715 1186 aaPredicted RBP9.98□□□□□ -0.81
VPS50-207ENST00000458530 CDC25AP30304 524 aa9.98□□□□□ -0.81
VPS50-207ENST00000458530 MYL5Q02045 173 aa9.98□□□□□ -0.81
VPS50-207ENST00000458530 GRB10Q13322 594 aa9.98□□□□□ -0.81
VPS50-207ENST00000458530 MTMR1Q13613 665 aa9.98□□□□□ -0.81
VPS50-207ENST00000458530 BAATQ14032 418 aaPredicted RBP9.98□□□□□ -0.81
VPS50-207ENST00000458530 PWP2Q15269 919 aaKnown RBP9.98□□□□□ -0.81
VPS50-207ENST00000458530 CNNM4Q6P4Q7 775 aa9.98□□□□□ -0.81
VPS50-207ENST00000458530 LUZP1Q86V48 1076 aa9.98□□□□□ -0.81
VPS50-207ENST00000458530 GRAMD1CQ8IYS0 662 aa9.98□□□□□ -0.81
VPS50-207ENST00000458530 ANKRD35Q8N283 1001 aa9.98□□□□□ -0.81
VPS50-207ENST00000458530 AOPEPQ8N6M6 819 aa9.98□□□□□ -0.81
VPS50-207ENST00000458530 SHCBP1Q8NEM2 672 aa9.98□□□□□ -0.81
VPS50-207ENST00000458530 TBC1D5Q92609 795 aa9.98□□□□□ -0.81
VPS50-207ENST00000458530 RAD54LQ92698 747 aa9.98□□□□□ -0.81
VPS50-207ENST00000458530 ERCC4Q92889 916 aaPredicted RBP9.98□□□□□ -0.81
VPS50-207ENST00000458530 GPRASP2Q96D09 838 aa9.98□□□□□ -0.81
VPS50-207ENST00000458530 TRIM44Q96DX7 344 aaPredicted RBP9.98□□□□□ -0.81
VPS50-207ENST00000458530 KCNK17Q96T54 332 aa9.98□□□□□ -0.81
VPS50-207ENST00000458530 C7orf25Q9BPX7 421 aa9.98□□□□□ -0.81
VPS50-207ENST00000458530 MMTAG2Q9BU76 263 aaKnown RBP9.98□□□□□ -0.81
VPS50-207ENST00000458530 POLR3CQ9BUI4 534 aaPredicted RBP9.98□□□□□ -0.81
VPS50-207ENST00000458530 MROH8Q9H579 483 aa9.98□□□□□ -0.81
VPS50-207ENST00000458530 JADE2Q9NQC1 790 aa9.98□□□□□ -0.81
VPS50-207ENST00000458530 PRDM6Q9NQX0 595 aa9.98□□□□□ -0.81
VPS50-207ENST00000458530 EXOC1Q9NV70 894 aa9.98□□□□□ -0.81
VPS50-207ENST00000458530 CYP39A1Q9NYL5 469 aa9.98□□□□□ -0.81
VPS50-207ENST00000458530 UBIAD1Q9Y5Z9 338 aa9.98□□□□□ -0.81
VPS50-207ENST00000458530 PVALEFA0A1B0GWK0 134 aa9.97□□□□□ -0.81
VPS50-207ENST00000458530 GOLGA6L6A8MZA4 724 aa9.97□□□□□ -0.81
VPS50-207ENST00000458530 PSMD10O75832 226 aa9.97□□□□□ -0.81
VPS50-207ENST00000458530 MYCLP12524 364 aaPredicted RBP9.97□□□□□ -0.81
VPS50-207ENST00000458530 SYN1P17600 705 aa9.97□□□□□ -0.81
VPS50-207ENST00000458530 GCLCP48506 637 aaPredicted RBP9.97□□□□□ -0.81
VPS50-207ENST00000458530 ASIC1P78348 528 aa9.97□□□□□ -0.81
VPS50-207ENST00000458530 PLCB2Q00722 1185 aa9.97□□□□□ -0.81
VPS50-207ENST00000458530 KRT76Q01546 638 aa9.97□□□□□ -0.81
VPS50-207ENST00000458530 IQCB1Q15051 598 aa9.97□□□□□ -0.81
VPS50-207ENST00000458530 NAALADL2Q58DX5 795 aa9.97□□□□□ -0.81
VPS50-207ENST00000458530 ZNF658Q5TYW1 1059 aaPredicted RBP9.97□□□□□ -0.81
VPS50-207ENST00000458530 NCAPG2Q86XI2 1143 aa9.97□□□□□ -0.81
VPS50-207ENST00000458530 RDM1Q8NG50 284 aa9.97□□□□□ -0.81
VPS50-207ENST00000458530 SMCR8Q8TEV9 937 aaPredicted RBP9.97□□□□□ -0.81
VPS50-207ENST00000458530 TAAR1Q96RJ0 339 aa9.97□□□□□ -0.81
VPS50-207ENST00000458530 PPP1R9BQ96SB3 815 aa9.97□□□□□ -0.81
VPS50-207ENST00000458530 PAGR1Q9BTK6 254 aa9.97□□□□□ -0.81
VPS50-207ENST00000458530 C11orf49Q9H6J7 331 aa9.97□□□□□ -0.81
VPS50-207ENST00000458530 A1CFQ9NQ94 594 aaKnown RBP9.97□□□□□ -0.81
VPS50-207ENST00000458530 COL20A1Q9P218 1284 aa9.97□□□□□ -0.81
VPS50-207ENST00000458530 VAV3Q9UKW4 847 aa9.97□□□□□ -0.81
VPS50-207ENST00000458530 DNM3Q9UQ16 869 aa9.97□□□□□ -0.81
VPS50-207ENST00000458530 RIPK3Q9Y572 518 aa9.97□□□□□ -0.81
VPS50-207ENST00000458530 EYSQ5T1H1 3165 aa9.97□□□□□ -0.81
VPS50-207ENST00000458530 ARID2Q68CP9 1835 aa9.96□□□□□ -0.81
VPS50-207ENST00000458530 ZNF236Q9UL36 1845 aa9.96□□□□□ -0.81
VPS50-207ENST00000458530 DOCK5Q9H7D0 1870 aa9.96□□□□□ -0.81
VPS50-207ENST00000458530 DKC1O60832 514 aaKnown RBP eCLIP9.96□□□□□ -0.82
VPS50-207ENST00000458530 RHOBTB3O94955 611 aa9.96□□□□□ -0.82
VPS50-207ENST00000458530 TPM3P06753 285 aa9.96□□□□□ -0.82
VPS50-207ENST00000458530 NR3C2P08235 984 aa9.96□□□□□ -0.82
VPS50-207ENST00000458530 SFNP31947 248 aa9.96□□□□□ -0.82
VPS50-207ENST00000458530 JAK3P52333 1124 aa9.96□□□□□ -0.82
VPS50-207ENST00000458530 SPIRE1Q08AE8 756 aa9.96□□□□□ -0.82
VPS50-207ENST00000458530 TRIM32Q13049 653 aa9.96□□□□□ -0.82
VPS50-207ENST00000458530 CUL4BQ13620 913 aa9.96□□□□□ -0.82
VPS50-207ENST00000458530 EPHA7Q15375 998 aa9.96□□□□□ -0.82
VPS50-207ENST00000458530 STXBP2Q15833 593 aa9.96□□□□□ -0.82
VPS50-207ENST00000458530 SARM1Q6SZW1 724 aa9.96□□□□□ -0.82
VPS50-207ENST00000458530 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.96□□□□□ -0.82
VPS50-207ENST00000458530 DHX40Q8IX18 779 aaKnown RBP9.96□□□□□ -0.82
VPS50-207ENST00000458530 PNMA5Q96PV4 448 aa9.96□□□□□ -0.82
VPS50-207ENST00000458530 PLIN2Q99541 437 aa9.96□□□□□ -0.82
VPS50-207ENST00000458530 TRIM9Q9C026 710 aa9.96□□□□□ -0.82
VPS50-207ENST00000458530 UBE2OQ9C0C9 1292 aaKnown RBP9.96□□□□□ -0.82
VPS50-207ENST00000458530 KCNH7Q9NS40 1196 aa9.96□□□□□ -0.82
VPS50-207ENST00000458530 BTBD7Q9P203 1132 aa9.96□□□□□ -0.82
VPS50-207ENST00000458530 KIAA1024Q9UPX6 916 aa9.96□□□□□ -0.82
VPS50-207ENST00000458530 SYNRGQ9UMZ2 1314 aa9.96□□□□□ -0.82
VPS50-207ENST00000458530 PRUNE2Q8WUY3 3088 aa9.96□□□□□ -0.82
VPS50-207ENST00000458530 CDH23Q9H251 3354 aa9.95□□□□□ -0.82
VPS50-207ENST00000458530 BICDL2A1A5D9 508 aa9.95□□□□□ -0.82
VPS50-207ENST00000458530 PSMA7O14818 248 aa9.95□□□□□ -0.82
VPS50-207ENST00000458530 CBFA2T2O43439 604 aa9.95□□□□□ -0.82
VPS50-207ENST00000458530 KIF20AO95235 890 aa9.95□□□□□ -0.82
VPS50-207ENST00000458530 KRT18P05783 430 aaKnown RBP9.95□□□□□ -0.82
VPS50-207ENST00000458530 PTMAP06454 111 aaKnown RBP9.95□□□□□ -0.82
VPS50-207ENST00000458530 ITGB5P18084 799 aa9.95□□□□□ -0.82
VPS50-207ENST00000458530 ERVK-9P63128 1117 aa9.95□□□□□ -0.82
VPS50-207ENST00000458530 ERVK-24P63145 666 aa9.95□□□□□ -0.82
VPS50-207ENST00000458530 PSMD2Q13200 908 aa9.95□□□□□ -0.82
VPS50-207ENST00000458530 DHX8Q14562 1220 aaKnown RBP9.95□□□□□ -0.82
VPS50-207ENST00000458530 MCM6Q14566 821 aa9.95□□□□□ -0.82
VPS50-207ENST00000458530 KCTD2Q14681 263 aa9.95□□□□□ -0.82
VPS50-207ENST00000458530 TPD52L1Q16890 204 aaPredicted RBP9.95□□□□□ -0.82
VPS50-207ENST00000458530 ADGRD1Q6QNK2 874 aa9.95□□□□□ -0.82
VPS50-207ENST00000458530 UNC13DQ70J99 1090 aa9.95□□□□□ -0.82
VPS50-207ENST00000458530 MIER3Q7Z3K6 550 aa9.95□□□□□ -0.82
VPS50-207ENST00000458530 VSIG10LQ86VR7 867 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms