RNA–Protein interactions for RNA: ENST00000458258.5

PTBP3-207, Transcript of polypyrimidine tract binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene PTBP3, Length 7,995 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP3-207ENST00000458258 CCL14Q16627 93 aa6.32□□□□□ -1.4
PTBP3-207ENST00000458258 SPOPLQ6IQ16 392 aa6.32□□□□□ -1.4
PTBP3-207ENST00000458258 TAF1DQ9H5J8 278 aaPredicted RBP6.32□□□□□ -1.4
PTBP3-207ENST00000458258 MINDY3Q9H8M7 445 aa6.32□□□□□ -1.4
PTBP3-207ENST00000458258 PLCB1Q9NQ66 1216 aa6.32□□□□□ -1.4
PTBP3-207ENST00000458258 UBIAD1Q9Y5Z9 338 aa6.32□□□□□ -1.4
PTBP3-207ENST00000458258 LRRC53A6NM62 1247 aa6.32□□□□□ -1.4
PTBP3-207ENST00000458258 HIP1RO75146 1068 aa6.32□□□□□ -1.4
PTBP3-207ENST00000458258 MTMR14Q8NCE2 650 aa6.32□□□□□ -1.4
PTBP3-207ENST00000458258 BRI3BPQ8WY22 251 aa6.32□□□□□ -1.4
PTBP3-207ENST00000458258 POMGNT1Q8WZA1 660 aa6.32□□□□□ -1.4
PTBP3-207ENST00000458258 BAP1Q92560 729 aa6.32□□□□□ -1.4
PTBP3-207ENST00000458258 NR2E1Q9Y466 385 aa6.32□□□□□ -1.4
PTBP3-207ENST00000458258 IGSF9BQ9UPX0 1349 aa6.32□□□□□ -1.4
PTBP3-207ENST00000458258 A0A1B0GUL6 1792 aa6.32□□□□□ -1.4
PTBP3-207ENST00000458258 TTLL12Q14166 644 aaPredicted RBP6.32□□□□□ -1.4
PTBP3-207ENST00000458258 ZNF746Q6NUN9 644 aaPredicted RBP6.32□□□□□ -1.4
PTBP3-207ENST00000458258 FAM83AQ86UY5 434 aa6.32□□□□□ -1.4
PTBP3-207ENST00000458258 SPNS2Q8IVW8 549 aa6.32□□□□□ -1.4
PTBP3-207ENST00000458258 NOA1Q8NC60 698 aaKnown RBP6.32□□□□□ -1.4
PTBP3-207ENST00000458258 ZNF280CQ8ND82 737 aa6.32□□□□□ -1.4
PTBP3-207ENST00000458258 SEMA4DQ92854 862 aa6.32□□□□□ -1.4
PTBP3-207ENST00000458258 SLC35C1Q96A29 364 aa6.32□□□□□ -1.4
PTBP3-207ENST00000458258 C7orf25Q9BPX7 421 aa6.32□□□□□ -1.4
PTBP3-207ENST00000458258 MXRA8Q9BRK3 442 aa6.32□□□□□ -1.4
PTBP3-207ENST00000458258 SAMM50Q9Y512 469 aa6.32□□□□□ -1.4
PTBP3-207ENST00000458258 ICAM1P05362 532 aa6.32□□□□□ -1.4
PTBP3-207ENST00000458258 RARRES1P49788 294 aa6.32□□□□□ -1.4
PTBP3-207ENST00000458258 GFPT1Q06210 699 aaPredicted RBP6.32□□□□□ -1.4
PTBP3-207ENST00000458258 SV2BQ7L1I2 683 aa6.32□□□□□ -1.4
PTBP3-207ENST00000458258 LMNB1P20700 586 aa6.32□□□□□ -1.4
PTBP3-207ENST00000458258 PTMSP20962 102 aa6.32□□□□□ -1.4
PTBP3-207ENST00000458258 SPECC1LQ69YQ0 1117 aa6.32□□□□□ -1.4
PTBP3-207ENST00000458258 ARHGEF19Q8IW93 802 aa6.32□□□□□ -1.4
PTBP3-207ENST00000458258 ZNF831Q5JPB2 1677 aa6.31□□□□□ -1.4
PTBP3-207ENST00000458258 LRRC37AA6NMS7 1700 aa6.31□□□□□ -1.4
PTBP3-207ENST00000458258 IGF2BP3O00425 579 aaKnown RBP eCLIP6.31□□□□□ -1.41e-8■□□□□ 10.8
PTBP3-207ENST00000458258 DSG3P32926 999 aa6.31□□□□□ -1.4
PTBP3-207ENST00000458258 PRPHP41219 470 aa6.31□□□□□ -1.4
PTBP3-207ENST00000458258 NCAPG2Q86XI2 1143 aa6.31□□□□□ -1.4
PTBP3-207ENST00000458258 ASAP3Q8TDY4 903 aa6.31□□□□□ -1.4
PTBP3-207ENST00000458258 ZCCHC17Q9NP64 241 aaKnown RBP6.31□□□□□ -1.4
PTBP3-207ENST00000458258 SPDYE3A6NKU9 549 aa6.31□□□□□ -1.4
PTBP3-207ENST00000458258 H7C1D1 291 aa6.31□□□□□ -1.4
PTBP3-207ENST00000458258 CTNND1O60716 968 aaKnown RBP6.31□□□□□ -1.4
PTBP3-207ENST00000458258 ZSCAN20P17040 1043 aaPredicted RBP6.31□□□□□ -1.4
PTBP3-207ENST00000458258 RRAGAQ7L523 313 aa6.31□□□□□ -1.4
PTBP3-207ENST00000458258 SLC35F6Q8N357 371 aa6.31□□□□□ -1.4
PTBP3-207ENST00000458258 ASCC2Q9H1I8 757 aaPredicted RBP6.31□□□□□ -1.4
PTBP3-207ENST00000458258 GABBR1Q9UBS5 961 aa6.31□□□□□ -1.4
PTBP3-207ENST00000458258 BUB1O43683 1085 aa6.31□□□□□ -1.4
PTBP3-207ENST00000458258 SFPQP23246 707 aaKnown RBP eCLIP6.31□□□□□ -1.4
PTBP3-207ENST00000458258 RPA1P27694 616 aa6.31□□□□□ -1.4
PTBP3-207ENST00000458258 AFF1P51825 1210 aaKnown RBP6.31□□□□□ -1.4
PTBP3-207ENST00000458258 GUCY2FP51841 1108 aa6.31□□□□□ -1.4
PTBP3-207ENST00000458258 RAB6CQ53S08 254 aa6.31□□□□□ -1.4
PTBP3-207ENST00000458258 GPC2Q8N158 579 aa6.31□□□□□ -1.4
PTBP3-207ENST00000458258 RAB6CQ9H0N0 254 aa6.31□□□□□ -1.4
PTBP3-207ENST00000458258 GSTTP1A0A1W2PQM5 241 aa6.31□□□□□ -1.4
PTBP3-207ENST00000458258 HARSP12081 509 aaKnown RBP6.31□□□□□ -1.4
PTBP3-207ENST00000458258 TNFSF9P41273 254 aa6.31□□□□□ -1.4
PTBP3-207ENST00000458258 HGSNATQ68CP4 663 aa6.31□□□□□ -1.4
PTBP3-207ENST00000458258 RNF207Q6ZRF8 634 aa6.31□□□□□ -1.4
PTBP3-207ENST00000458258 COG1Q8WTW3 980 aa6.31□□□□□ -1.4
PTBP3-207ENST00000458258 FLRT1Q9NZU1 646 aa6.31□□□□□ -1.4
PTBP3-207ENST00000458258 ATMINO43313 823 aaPredicted RBP6.31□□□□□ -1.4
PTBP3-207ENST00000458258 VSIG10LQ86VR7 867 aa6.31□□□□□ -1.4
PTBP3-207ENST00000458258 PXMP2Q9NR77 195 aa6.31□□□□□ -1.4
PTBP3-207ENST00000458258 ADAMTS5Q9UNA0 930 aa6.31□□□□□ -1.4
PTBP3-207ENST00000458258 PEX3P56589 373 aa6.31□□□□□ -1.4
PTBP3-207ENST00000458258 ZNF200P98182 395 aaPredicted RBP6.31□□□□□ -1.4
PTBP3-207ENST00000458258 MTERF2Q49AM1 385 aa6.31□□□□□ -1.4
PTBP3-207ENST00000458258 SLC5A5Q92911 643 aa6.31□□□□□ -1.4
PTBP3-207ENST00000458258 OPTNQ96CV9 577 aa6.31□□□□□ -1.4
PTBP3-207ENST00000458258 MS4A4AQ96JQ5 239 aa6.31□□□□□ -1.4
PTBP3-207ENST00000458258 CEP89Q96ST8 783 aa6.31□□□□□ -1.4
PTBP3-207ENST00000458258 BAG1Q99933 345 aaPredicted RBP6.31□□□□□ -1.4
PTBP3-207ENST00000458258 CPA4Q9UI42 421 aa6.31□□□□□ -1.4
PTBP3-207ENST00000458258 KCNA2P16389 499 aa6.3□□□□□ -1.4
PTBP3-207ENST00000458258 RABGGTBP53611 331 aa6.3□□□□□ -1.4
PTBP3-207ENST00000458258 POLR2FP61218 127 aaKnown RBP6.3□□□□□ -1.4
PTBP3-207ENST00000458258 CCDC127Q96BQ5 260 aa6.3□□□□□ -1.4
PTBP3-207ENST00000458258 NOC4LQ9BVI4 516 aaKnown RBP6.3□□□□□ -1.4
PTBP3-207ENST00000458258 RNPEPQ9H4A4 650 aa6.3□□□□□ -1.4
PTBP3-207ENST00000458258 ARHGEF10LQ9HCE6 1279 aa6.3□□□□□ -1.4
PTBP3-207ENST00000458258 TJP2Q9UDY2 1190 aa6.3□□□□□ -1.4
PTBP3-207ENST00000458258 A0A087X0T9 212 aa6.3□□□□□ -1.4
PTBP3-207ENST00000458258 NPM3O75607 178 aaKnown RBP6.3□□□□□ -1.4
PTBP3-207ENST00000458258 ATP1A1P05023 1023 aaKnown RBP6.3□□□□□ -1.4
PTBP3-207ENST00000458258 IQCF3P0C7M6 154 aa6.3□□□□□ -1.4
PTBP3-207ENST00000458258 FAM228BP0C875 321 aa6.3□□□□□ -1.4
PTBP3-207ENST00000458258 ERCC5P28715 1186 aaPredicted RBP6.3□□□□□ -1.4
PTBP3-207ENST00000458258 TMEM62Q0P6H9 643 aa6.3□□□□□ -1.4
PTBP3-207ENST00000458258 TNIP1Q15025 636 aa6.3□□□□□ -1.4
PTBP3-207ENST00000458258 UNC13DQ70J99 1090 aa6.3□□□□□ -1.4
PTBP3-207ENST00000458258 AGO4Q9HCK5 861 aaKnown RBP6.3□□□□□ -1.4
PTBP3-207ENST00000458258 MRPL42Q9Y6G3 142 aaKnown RBP6.3□□□□□ -1.4
PTBP3-207ENST00000458258 CACNA1FO60840 1977 aa6.3□□□□□ -1.4
PTBP3-207ENST00000458258 MYO3BQ8WXR4 1341 aa6.3□□□□□ -1.4
PTBP3-207ENST00000458258 TMCO5BA8MYB1 307 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms