RNA–Protein interactions for RNA: ENST00000458188.2

CLTCL1-204, Transcript of clathrin heavy chain like 1, humanhuman

TSL 3

Gene CLTCL1, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-204ENST00000458188 ERMNQ8TAM6 284 aa9.73□□□□□ -0.85
CLTCL1-204ENST00000458188 LRRC15Q8TF66 581 aa9.73□□□□□ -0.85
CLTCL1-204ENST00000458188 TRAPPC12Q8WVT3 735 aa9.73□□□□□ -0.85
CLTCL1-204ENST00000458188 LRCH3Q96II8 777 aa9.73□□□□□ -0.85
CLTCL1-204ENST00000458188 PAWRQ96IZ0 340 aaKnown RBP9.73□□□□□ -0.85
CLTCL1-204ENST00000458188 LXNQ9BS40 222 aa9.73□□□□□ -0.85
CLTCL1-204ENST00000458188 MTG1Q9BT17 334 aaPredicted RBP9.73□□□□□ -0.85
CLTCL1-204ENST00000458188 COL25A1Q9BXS0 654 aaPredicted RBP9.73□□□□□ -0.85
CLTCL1-204ENST00000458188 RAB34Q9BZG1 259 aa9.73□□□□□ -0.85
CLTCL1-204ENST00000458188 PRO3102Q9H379 93 aa9.73□□□□□ -0.85
CLTCL1-204ENST00000458188 SMARCAD1Q9H4L7 1026 aa9.73□□□□□ -0.85
CLTCL1-204ENST00000458188 TUT1Q9H6E5 874 aaKnown RBP9.73□□□□□ -0.85
CLTCL1-204ENST00000458188 POLD4Q9HCU8 107 aa9.73□□□□□ -0.85
CLTCL1-204ENST00000458188 BMP2KQ9NSY1 1161 aaPredicted RBP9.73□□□□□ -0.85
CLTCL1-204ENST00000458188 TRPC6Q9Y210 931 aa9.73□□□□□ -0.85
CLTCL1-204ENST00000458188 MAFBQ9Y5Q3 323 aaPredicted RBP9.73□□□□□ -0.85
CLTCL1-204ENST00000458188 MYH7BA7E2Y1 1941 aa9.73□□□□□ -0.85
CLTCL1-204ENST00000458188 LRRC37A2A6NM11 1700 aa9.73□□□□□ -0.85
CLTCL1-204ENST00000458188 MCM3APO60318 1980 aa9.72□□□□□ -0.85
CLTCL1-204ENST00000458188 RANBP2P49792 3224 aaKnown RBP9.72□□□□□ -0.85
CLTCL1-204ENST00000458188 A0A1W2PQ45 241 aaPredicted RBP9.72□□□□□ -0.85
CLTCL1-204ENST00000458188 A0A1W2PQY0 241 aa9.72□□□□□ -0.85
CLTCL1-204ENST00000458188 GOLGA6L4A6NEF3 574 aa9.72□□□□□ -0.85
CLTCL1-204ENST00000458188 DNM1LO00429 736 aa9.72□□□□□ -0.85
CLTCL1-204ENST00000458188 STBD1O95210 358 aa9.72□□□□□ -0.85
CLTCL1-204ENST00000458188 CST5P28325 142 aaPredicted RBP9.72□□□□□ -0.85
CLTCL1-204ENST00000458188 NPEPPSP55786 919 aa9.72□□□□□ -0.85
CLTCL1-204ENST00000458188 PSMC5P62195 406 aa9.72□□□□□ -0.85
CLTCL1-204ENST00000458188 NKX3-2P78367 333 aa9.72□□□□□ -0.85
CLTCL1-204ENST00000458188 PRKCEQ02156 737 aa9.72□□□□□ -0.85
CLTCL1-204ENST00000458188 HIC1Q14526 733 aa9.72□□□□□ -0.85
CLTCL1-204ENST00000458188 FAM47CQ5HY64 1035 aa9.72□□□□□ -0.85
CLTCL1-204ENST00000458188 GPR153Q6NV75 609 aa9.72□□□□□ -0.85
CLTCL1-204ENST00000458188 PLPPR4Q7Z2D5 763 aa9.72□□□□□ -0.85
CLTCL1-204ENST00000458188 DEFB123Q8N688 67 aa9.72□□□□□ -0.85
CLTCL1-204ENST00000458188 FSIP1Q8NA03 581 aa9.72□□□□□ -0.85
CLTCL1-204ENST00000458188 POLR3CQ9BUI4 534 aaPredicted RBP9.72□□□□□ -0.85
CLTCL1-204ENST00000458188 GOLPH3LQ9H4A5 285 aa9.72□□□□□ -0.85
CLTCL1-204ENST00000458188 STARD7Q9NQZ5 370 aa9.72□□□□□ -0.85
CLTCL1-204ENST00000458188 DDX19AQ9NUU7 478 aaKnown RBP9.72□□□□□ -0.85
CLTCL1-204ENST00000458188 SETD4Q9NVD3 440 aa9.72□□□□□ -0.85
CLTCL1-204ENST00000458188 PHF24Q9UPV7 400 aa9.72□□□□□ -0.85
CLTCL1-204ENST00000458188 STXBP5LQ9Y2K9 1186 aa9.72□□□□□ -0.85
CLTCL1-204ENST00000458188 GRIN2DO15399 1336 aa9.72□□□□□ -0.85
CLTCL1-204ENST00000458188 SOX1O00570 391 aaPredicted RBP9.71□□□□□ -0.86
CLTCL1-204ENST00000458188 EVI5O60447 810 aa9.71□□□□□ -0.86
CLTCL1-204ENST00000458188 KPNA6O60684 536 aa9.71□□□□□ -0.86
CLTCL1-204ENST00000458188 F2P00734 622 aa9.71□□□□□ -0.86
CLTCL1-204ENST00000458188 OATP04181 439 aa9.71□□□□□ -0.86
CLTCL1-204ENST00000458188 SSBP05455 408 aaKnown RBP eCLIP9.71□□□□□ -0.86
CLTCL1-204ENST00000458188 SMIM10L2AP0DMW4 78 aa9.71□□□□□ -0.86
CLTCL1-204ENST00000458188 SMIM10L2BP0DMW5 78 aa9.71□□□□□ -0.86
CLTCL1-204ENST00000458188 HOXD8P13378 290 aaPredicted RBP9.71□□□□□ -0.86
CLTCL1-204ENST00000458188 INSRRP14616 1297 aa9.71□□□□□ -0.86
CLTCL1-204ENST00000458188 PFKFB1P16118 471 aa9.71□□□□□ -0.86
CLTCL1-204ENST00000458188 PLCG1P19174 1290 aa9.71□□□□□ -0.86
CLTCL1-204ENST00000458188 RPA1P27694 616 aa9.71□□□□□ -0.86
CLTCL1-204ENST00000458188 YWHABP31946 246 aaKnown RBP9.71□□□□□ -0.86
CLTCL1-204ENST00000458188 NDUFA8P51970 172 aa9.71□□□□□ -0.86
CLTCL1-204ENST00000458188 ITGA7Q13683 1181 aa9.71□□□□□ -0.86
CLTCL1-204ENST00000458188 MTERF2Q49AM1 385 aa9.71□□□□□ -0.86
CLTCL1-204ENST00000458188 RESP18Q5W5W9 173 aa9.71□□□□□ -0.86
CLTCL1-204ENST00000458188 ADALQ6DHV7 355 aa9.71□□□□□ -0.86
CLTCL1-204ENST00000458188 ANO5Q75V66 913 aa9.71□□□□□ -0.86
CLTCL1-204ENST00000458188 MAEAQ7L5Y9 396 aa9.71□□□□□ -0.86
CLTCL1-204ENST00000458188 RDM1Q8NG50 284 aa9.71□□□□□ -0.86
CLTCL1-204ENST00000458188 AFAP1L1Q8TED9 768 aa9.71□□□□□ -0.86
CLTCL1-204ENST00000458188 STAMQ92783 540 aa9.71□□□□□ -0.86
CLTCL1-204ENST00000458188 ATP6V0A1Q93050 837 aa9.71□□□□□ -0.86
CLTCL1-204ENST00000458188 DHX58Q96C10 678 aa9.71□□□□□ -0.86
CLTCL1-204ENST00000458188 CDK5RAP3Q96JB5 506 aa9.71□□□□□ -0.86
CLTCL1-204ENST00000458188 AK8Q96MA6 479 aa9.71□□□□□ -0.86
CLTCL1-204ENST00000458188 GLT1D1Q96MS3 346 aa9.71□□□□□ -0.86
CLTCL1-204ENST00000458188 GBP4Q96PP9 640 aa9.71□□□□□ -0.86
CLTCL1-204ENST00000458188 TSEN34Q9BSV6 310 aaKnown RBP9.71□□□□□ -0.86
CLTCL1-204ENST00000458188 ZSWIM4Q9H7M6 989 aa9.71□□□□□ -0.86
CLTCL1-204ENST00000458188 NRBP2Q9NSY0 501 aa9.71□□□□□ -0.86
CLTCL1-204ENST00000458188 FAM13BQ9NYF5 915 aa9.71□□□□□ -0.86
CLTCL1-204ENST00000458188 ERAP1Q9NZ08 941 aa9.71□□□□□ -0.86
CLTCL1-204ENST00000458188 HDAC6Q9UBN7 1215 aa9.71□□□□□ -0.86
CLTCL1-204ENST00000458188 SEPT9Q9UHD8 586 aaPredicted RBP9.71□□□□□ -0.86
CLTCL1-204ENST00000458188 NPHP3-ACAD11A0A0J9YXS1 232 aa9.7□□□□□ -0.86
CLTCL1-204ENST00000458188 MOXD2PA6NHM9 499 aa9.7□□□□□ -0.86
CLTCL1-204ENST00000458188 HAS3O00219 553 aa9.7□□□□□ -0.86
CLTCL1-204ENST00000458188 POLR2DO15514 142 aaKnown RBP9.7□□□□□ -0.86
CLTCL1-204ENST00000458188 LIG1P18858 919 aa9.7□□□□□ -0.86
CLTCL1-204ENST00000458188 CMA1P23946 247 aa9.7□□□□□ -0.86
CLTCL1-204ENST00000458188 PPFIA1Q13136 1202 aa9.7□□□□□ -0.86
CLTCL1-204ENST00000458188 MCM6Q14566 821 aa9.7□□□□□ -0.86
CLTCL1-204ENST00000458188 XKR9Q5GH70 373 aa9.7□□□□□ -0.86
CLTCL1-204ENST00000458188 RRAGBQ5VZM2 374 aa9.7□□□□□ -0.86
CLTCL1-204ENST00000458188 HAUS3Q68CZ6 603 aa9.7□□□□□ -0.86
CLTCL1-204ENST00000458188 C4orf19Q8IY42 314 aa9.7□□□□□ -0.86
CLTCL1-204ENST00000458188 C7orf31Q8N865 590 aa9.7□□□□□ -0.86
CLTCL1-204ENST00000458188 ATP8B4Q8TF62 1192 aa9.7□□□□□ -0.86
CLTCL1-204ENST00000458188 CALML4Q96GE6 196 aa9.7□□□□□ -0.86
CLTCL1-204ENST00000458188 CEP170P1Q96L14 293 aa9.7□□□□□ -0.86
CLTCL1-204ENST00000458188 CCSER1Q9C0I3 900 aa9.7□□□□□ -0.86
CLTCL1-204ENST00000458188 TRPV6Q9H1D0 765 aa9.7□□□□□ -0.86
CLTCL1-204ENST00000458188 BHMT2Q9H2M3 363 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms