RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 GHRHRQ02643 423 aa18.35■□□□□ 0.53
CCDC43-202ENST00000457422 DMTNQ08495 405 aa18.35■□□□□ 0.53
CCDC43-202ENST00000457422 UTP14CQ5TAP6 766 aaKnown RBP18.35■□□□□ 0.53
CCDC43-202ENST00000457422 FUT8Q9BYC5 575 aa18.35■□□□□ 0.53
CCDC43-202ENST00000457422 METTL14Q9HCE5 456 aaKnown RBP18.35■□□□□ 0.53
CCDC43-202ENST00000457422 PLCB1Q9NQ66 1216 aa18.35■□□□□ 0.53
CCDC43-202ENST00000457422 AIPL1Q9NZN9 384 aa18.35■□□□□ 0.53
CCDC43-202ENST00000457422 KCND2Q9NZV8 630 aa18.35■□□□□ 0.53
CCDC43-202ENST00000457422 PHF20L1A8MW92 1017 aa18.34■□□□□ 0.53
CCDC43-202ENST00000457422 ARP10275 920 aa18.34■□□□□ 0.53
CCDC43-202ENST00000457422 INPP5BP32019 993 aa18.34■□□□□ 0.53
CCDC43-202ENST00000457422 EPS15P42566 896 aa18.34■□□□□ 0.53
CCDC43-202ENST00000457422 MAGEA1P43355 309 aa18.34■□□□□ 0.53
CCDC43-202ENST00000457422 EPHA7Q15375 998 aa18.34■□□□□ 0.53
CCDC43-202ENST00000457422 NFIL3Q16649 462 aa18.34■□□□□ 0.53
CCDC43-202ENST00000457422 LONRF2Q1L5Z9 754 aa18.34■□□□□ 0.53
CCDC43-202ENST00000457422 CIAPIN1Q6FI81 312 aa18.34■□□□□ 0.53
CCDC43-202ENST00000457422 NOA1Q8NC60 698 aaKnown RBP18.34■□□□□ 0.53
CCDC43-202ENST00000457422 AGBL1Q96MI9 1066 aa18.34■□□□□ 0.53
CCDC43-202ENST00000457422 ZNF577Q9BSK1 485 aa18.34■□□□□ 0.53
CCDC43-202ENST00000457422 SEL1LQ9UBV2 794 aa18.34■□□□□ 0.53
CCDC43-202ENST00000457422 ZNF536O15090 1300 aa18.34■□□□□ 0.53
CCDC43-202ENST00000457422 RPTORQ8N122 1335 aa18.34■□□□□ 0.53
CCDC43-202ENST00000457422 MYH10P35580 1976 aa18.34■□□□□ 0.53
CCDC43-202ENST00000457422 ERLIN1O75477 346 aa18.34■□□□□ 0.53
CCDC43-202ENST00000457422 GCNT3O95395 438 aa18.34■□□□□ 0.53
CCDC43-202ENST00000457422 NR3C1P04150 777 aa18.34■□□□□ 0.53
CCDC43-202ENST00000457422 BCRP11274 1271 aa18.34■□□□□ 0.53
CCDC43-202ENST00000457422 PRLRP16471 622 aa18.34■□□□□ 0.53
CCDC43-202ENST00000457422 ZNF131P52739 623 aa18.34■□□□□ 0.53
CCDC43-202ENST00000457422 RASA3Q14644 834 aa18.34■□□□□ 0.53
CCDC43-202ENST00000457422 DPY19L2P1Q6NXN4 242 aa18.34■□□□□ 0.53
CCDC43-202ENST00000457422 WDR93Q6P2C0 686 aa18.34■□□□□ 0.53
CCDC43-202ENST00000457422 NACC1Q96RE7 527 aa18.34■□□□□ 0.53
CCDC43-202ENST00000457422 RIT2Q99578 217 aa18.34■□□□□ 0.53
CCDC43-202ENST00000457422 UNC45AQ9H3U1 944 aa18.34■□□□□ 0.53
CCDC43-202ENST00000457422 CCPG1Q9ULG6 757 aa18.34■□□□□ 0.53
CCDC43-202ENST00000457422 CAPN6Q9Y6Q1 641 aa18.34■□□□□ 0.53
CCDC43-202ENST00000457422 UBE4BO95155 1302 aa18.34■□□□□ 0.53
CCDC43-202ENST00000457422 WDR46O15213 610 aaKnown RBP18.33■□□□□ 0.52
CCDC43-202ENST00000457422 SRGAP2O75044 1071 aa18.33■□□□□ 0.52
CCDC43-202ENST00000457422 FAM13AO94988 1023 aa18.33■□□□□ 0.52
CCDC43-202ENST00000457422 AFPP02771 609 aaKnown RBP18.33■□□□□ 0.52
CCDC43-202ENST00000457422 POLD1P28340 1107 aa18.33■□□□□ 0.52
CCDC43-202ENST00000457422 TDRD12Q587J7 1177 aaKnown RBP18.33■□□□□ 0.52
CCDC43-202ENST00000457422 BEND6Q5SZJ8 279 aaPredicted RBP18.33■□□□□ 0.52
CCDC43-202ENST00000457422 LPAR1Q92633 364 aa18.33■□□□□ 0.52
CCDC43-202ENST00000457422 MMS19Q96T76 1030 aa18.33■□□□□ 0.52
CCDC43-202ENST00000457422 MXRA8Q9BRK3 442 aa18.33■□□□□ 0.52
CCDC43-202ENST00000457422 TEKT3Q9BXF9 490 aa18.33■□□□□ 0.52
CCDC43-202ENST00000457422 MLXIPQ9HAP2 919 aa18.33■□□□□ 0.52
CCDC43-202ENST00000457422 GINM1Q9NU53 330 aa18.33■□□□□ 0.52
CCDC43-202ENST00000457422 BRCA1P38398 1863 aaKnown RBP18.33■□□□□ 0.52
CCDC43-202ENST00000457422 ZMYM2Q9UBW7 1377 aa18.32■□□□□ 0.52
CCDC43-202ENST00000457422 SFI1A8K8P3 1242 aa18.32■□□□□ 0.52
CCDC43-202ENST00000457422 MAP2K7O14733 419 aa18.32■□□□□ 0.52
CCDC43-202ENST00000457422 ZBTB39O15060 712 aa18.32■□□□□ 0.52
CCDC43-202ENST00000457422 AKAP3O75969 853 aa18.32■□□□□ 0.52
CCDC43-202ENST00000457422 RHOXF2BP0C7M4 288 aa18.32■□□□□ 0.52
CCDC43-202ENST00000457422 XRCC5P13010 732 aaKnown RBP18.32■□□□□ 0.52
CCDC43-202ENST00000457422 GFPT1Q06210 699 aaPredicted RBP18.32■□□□□ 0.52
CCDC43-202ENST00000457422 SF3B2Q13435 895 aaKnown RBP18.32■□□□□ 0.52
CCDC43-202ENST00000457422 RNF10Q8N5U6 811 aaKnown RBP18.32■□□□□ 0.52
CCDC43-202ENST00000457422 NEK9Q8TD19 979 aa18.32■□□□□ 0.52
CCDC43-202ENST00000457422 ALS2CR12Q96Q35 445 aa18.32■□□□□ 0.52
CCDC43-202ENST00000457422 RHOXF2Q9BQY4 288 aa18.32■□□□□ 0.52
CCDC43-202ENST00000457422 GBP3Q9H0R5 595 aa18.32■□□□□ 0.52
CCDC43-202ENST00000457422 PARVGQ9HBI0 331 aa18.32■□□□□ 0.52
CCDC43-202ENST00000457422 PIM2Q9P1W9 311 aa18.32■□□□□ 0.52
CCDC43-202ENST00000457422 ODF2LQ9ULJ1 636 aa18.32■□□□□ 0.52
CCDC43-202ENST00000457422 SNX12Q9UMY4 172 aa18.32■□□□□ 0.52
CCDC43-202ENST00000457422 MYH11P35749 1972 aa18.32■□□□□ 0.52
CCDC43-202ENST00000457422 TGFB1I1O43294 461 aa18.32■□□□□ 0.52
CCDC43-202ENST00000457422 EPB41P11171 864 aaKnown RBP18.32■□□□□ 0.52
CCDC43-202ENST00000457422 TGFB2P61812 414 aa18.32■□□□□ 0.52
CCDC43-202ENST00000457422 KCNA1Q09470 495 aa18.32■□□□□ 0.52
CCDC43-202ENST00000457422 NIPA1Q7RTP0 329 aa18.32■□□□□ 0.52
CCDC43-202ENST00000457422 MSL3Q8N5Y2 521 aaKnown RBP18.32■□□□□ 0.52
CCDC43-202ENST00000457422 PRPF38AQ8NAV1 312 aaKnown RBP18.32■□□□□ 0.52
CCDC43-202ENST00000457422 HOOK2Q96ED9 719 aa18.32■□□□□ 0.52
CCDC43-202ENST00000457422 LUC7LQ9NQ29 371 aaKnown RBP18.32■□□□□ 0.52
CCDC43-202ENST00000457422 ST7Q9NRC1 585 aa18.32■□□□□ 0.52
CCDC43-202ENST00000457422 WRAP73Q9P2S5 460 aaPredicted RBP18.32■□□□□ 0.52
CCDC43-202ENST00000457422 FBXL5Q9UKA1 691 aa18.32■□□□□ 0.52
CCDC43-202ENST00000457422 IPO5O00410 1097 aaKnown RBP18.31■□□□□ 0.52
CCDC43-202ENST00000457422 MOCS3O95396 460 aa18.31■□□□□ 0.52
CCDC43-202ENST00000457422 USP14P54578 494 aa18.31■□□□□ 0.52
CCDC43-202ENST00000457422 ZNF280AP59817 542 aaPredicted RBP18.31■□□□□ 0.52
CCDC43-202ENST00000457422 FAM193AP78312 1265 aa18.31■□□□□ 0.52
CCDC43-202ENST00000457422 TNFAIP1Q13829 316 aa18.31■□□□□ 0.52
CCDC43-202ENST00000457422 SLC18A3Q16572 532 aa18.31■□□□□ 0.52
CCDC43-202ENST00000457422 ZNF572Q7Z3I7 529 aaPredicted RBP18.31■□□□□ 0.52
CCDC43-202ENST00000457422 CAPZA3Q96KX2 299 aa18.31■□□□□ 0.52
CCDC43-202ENST00000457422 TEPSINQ96N21 525 aa18.31■□□□□ 0.52
CCDC43-202ENST00000457422 FIZ1Q96SL8 496 aa18.31■□□□□ 0.52
CCDC43-202ENST00000457422 KIAA1683Q9H0B3 1180 aa18.31■□□□□ 0.52
CCDC43-202ENST00000457422 TAOK3Q9H2K8 898 aa18.31■□□□□ 0.52
CCDC43-202ENST00000457422 COL20A1Q9P218 1284 aa18.31■□□□□ 0.52
CCDC43-202ENST00000457422 GTPBP10A4D1E9 387 aaKnown RBP18.3■□□□□ 0.52
CCDC43-202ENST00000457422 NFIBO00712 420 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms