RNA–Protein interactions for RNA: ENST00000457153.6

SYT1-204, Transcript of synaptotagmin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYT1, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYT1-204ENST00000457153 NKIRAS1Q9NYS0 192 aa15.29■□□□□ 0.04
SYT1-204ENST00000457153 RGS16O15492 202 aaPredicted RBP15.29■□□□□ 0.04
SYT1-204ENST00000457153 ECE2O60344 883 aa15.29■□□□□ 0.04
SYT1-204ENST00000457153 GGCXP38435 758 aa15.29■□□□□ 0.04
SYT1-204ENST00000457153 CACNB3P54284 484 aa15.29■□□□□ 0.04
SYT1-204ENST00000457153 SP4Q02446 784 aa15.29■□□□□ 0.04
SYT1-204ENST00000457153 NOA1Q8NC60 698 aaKnown RBP15.29■□□□□ 0.04
SYT1-204ENST00000457153 IKBKGQ9Y6K9 419 aa15.29■□□□□ 0.04
SYT1-204ENST00000457153 AFF2P51816 1311 aa15.29■□□□□ 0.04
SYT1-204ENST00000457153 GYS2P54840 703 aa15.29■□□□□ 0.04
SYT1-204ENST00000457153 HDLBPQ00341 1268 aaKnown RBP15.29■□□□□ 0.04
SYT1-204ENST00000457153 ST7Q9NRC1 585 aa15.29■□□□□ 0.04
SYT1-204ENST00000457153 RAB21Q9UL25 225 aa15.29■□□□□ 0.04
SYT1-204ENST00000457153 NFU1Q9UMS0 254 aa15.29■□□□□ 0.04
SYT1-204ENST00000457153 TESPA1A2RU30 521 aaPredicted RBP15.28■□□□□ 0.04
SYT1-204ENST00000457153 RPA1P27694 616 aa15.28■□□□□ 0.04
SYT1-204ENST00000457153 GJC1P36383 396 aa15.28■□□□□ 0.04
SYT1-204ENST00000457153 PLCB3Q01970 1234 aa15.28■□□□□ 0.04
SYT1-204ENST00000457153 EFCAB13Q8IY85 973 aa15.28■□□□□ 0.04
SYT1-204ENST00000457153 ATP6V0A1Q93050 837 aa15.28■□□□□ 0.04
SYT1-204ENST00000457153 TRIM11Q96F44 468 aa15.28■□□□□ 0.04
SYT1-204ENST00000457153 EIF2AK1Q9BQI3 630 aaKnown RBP15.28■□□□□ 0.04
SYT1-204ENST00000457153 DNAJC12Q9UKB3 198 aa15.28■□□□□ 0.04
SYT1-204ENST00000457153 TRPM3Q9HCF6 1732 aaPredicted RBP15.28■□□□□ 0.04
SYT1-204ENST00000457153 MIF4GDA9UHW6 222 aaKnown RBP15.28■□□□□ 0.04
SYT1-204ENST00000457153 ENTPD3O75355 529 aa15.28■□□□□ 0.04
SYT1-204ENST00000457153 MAN1A1P33908 653 aa15.28■□□□□ 0.04
SYT1-204ENST00000457153 EIF3BP55884 814 aaKnown RBP15.28■□□□□ 0.04
SYT1-204ENST00000457153 DCAF15Q66K64 600 aa15.28■□□□□ 0.04
SYT1-204ENST00000457153 L1RE1Q9UN81 338 aa15.28■□□□□ 0.04
SYT1-204ENST00000457153 RGPD5Q99666 1765 aa15.28■□□□□ 0.04
SYT1-204ENST00000457153 ALS2Q96Q42 1657 aa15.28■□□□□ 0.04
SYT1-204ENST00000457153 PASKQ96RG2 1323 aa15.28■□□□□ 0.04
SYT1-204ENST00000457153 CLRN2A0PK11 232 aa15.28■□□□□ 0.04
SYT1-204ENST00000457153 SLC37A4O43826 429 aa15.28■□□□□ 0.04
SYT1-204ENST00000457153 ASNSP08243 561 aa15.28■□□□□ 0.04
SYT1-204ENST00000457153 STAT3P40763 770 aa15.28■□□□□ 0.04
SYT1-204ENST00000457153 CCT5P48643 541 aa15.28■□□□□ 0.04
SYT1-204ENST00000457153 TEX2Q8IWB9 1127 aa15.28■□□□□ 0.04
SYT1-204ENST00000457153 CDAN1Q8IWY9 1227 aa15.28■□□□□ 0.04
SYT1-204ENST00000457153 ATP2C2O75185 946 aa15.27■□□□□ 0.04
SYT1-204ENST00000457153 MXI1P50539 228 aa15.27■□□□□ 0.04
SYT1-204ENST00000457153 EHD4Q9H223 541 aa15.27■□□□□ 0.04
SYT1-204ENST00000457153 FEM1BQ9UK73 627 aa15.27■□□□□ 0.04
SYT1-204ENST00000457153 VIMP08670 466 aaKnown RBP15.27■□□□□ 0.04
SYT1-204ENST00000457153 UBXN2AP68543 259 aa15.27■□□□□ 0.04
SYT1-204ENST00000457153 KCTD16Q68DU8 428 aa15.27■□□□□ 0.04
SYT1-204ENST00000457153 PPP1R2P3Q6NXS1 205 aa15.27■□□□□ 0.04
SYT1-204ENST00000457153 PIGOQ8TEQ8 1089 aa15.27■□□□□ 0.04
SYT1-204ENST00000457153 TDRD3Q9H7E2 651 aaKnown RBP15.27■□□□□ 0.04
SYT1-204ENST00000457153 KCNK9Q9NPC2 374 aa15.27■□□□□ 0.04
SYT1-204ENST00000457153 CYTH3O43739 400 aa15.27■□□□□ 0.03
SYT1-204ENST00000457153 MEA1Q16626 185 aa15.27■□□□□ 0.03
SYT1-204ENST00000457153 WDR78Q5VTH9 848 aa15.27■□□□□ 0.03
SYT1-204ENST00000457153 ARMC9Q7Z3E5 817 aa15.27■□□□□ 0.03
SYT1-204ENST00000457153 SEMA6BQ9H3T3 888 aa15.27■□□□□ 0.03
SYT1-204ENST00000457153 PODXL2Q9NZ53 605 aa15.27■□□□□ 0.03
SYT1-204ENST00000457153 KCND2Q9NZV8 630 aa15.27■□□□□ 0.03
SYT1-204ENST00000457153 TNNI1P19237 187 aa15.27■□□□□ 0.03
SYT1-204ENST00000457153 PBX1P40424 430 aa15.27■□□□□ 0.03
SYT1-204ENST00000457153 PTPROQ16827 1216 aa15.27■□□□□ 0.03
SYT1-204ENST00000457153 TMEM139Q8IV31 216 aa15.27■□□□□ 0.03
SYT1-204ENST00000457153 MAGOHBQ96A72 148 aaKnown RBP15.27■□□□□ 0.03
SYT1-204ENST00000457153 RABEP2Q9H5N1 569 aa15.27■□□□□ 0.03
SYT1-204ENST00000457153 PPANQ9NQ55 473 aaKnown RBP15.27■□□□□ 0.03
SYT1-204ENST00000457153 HOMER3Q9NSC5 361 aa15.27■□□□□ 0.03
SYT1-204ENST00000457153 KLK7P49862 253 aa15.26■□□□□ 0.03
SYT1-204ENST00000457153 GTF2A1P52655 376 aaPredicted RBP15.26■□□□□ 0.03
SYT1-204ENST00000457153 SNAP25P60880 206 aa15.26■□□□□ 0.03
SYT1-204ENST00000457153 EPHA7Q15375 998 aa15.26■□□□□ 0.03
SYT1-204ENST00000457153 UBE2TQ9NPD8 197 aaPredicted RBP15.26■□□□□ 0.03
SYT1-204ENST00000457153 FAM196BA6NMK8 535 aa15.26■□□□□ 0.03
SYT1-204ENST00000457153 NCK2O43639 380 aa15.26■□□□□ 0.03
SYT1-204ENST00000457153 NR1D1P20393 614 aa15.26■□□□□ 0.03
SYT1-204ENST00000457153 HERVK_113P62684 666 aa15.26■□□□□ 0.03
SYT1-204ENST00000457153 RTKN2Q8IZC4 609 aa15.26■□□□□ 0.03
SYT1-204ENST00000457153 BBOF1Q8ND07 529 aa15.26■□□□□ 0.03
SYT1-204ENST00000457153 CCDC127Q96BQ5 260 aa15.26■□□□□ 0.03
SYT1-204ENST00000457153 DYDC2Q96IM9 177 aa15.26■□□□□ 0.03
SYT1-204ENST00000457153 PNKPQ96T60 521 aa15.26■□□□□ 0.03
SYT1-204ENST00000457153 DUSP9Q99956 384 aaKnown RBP15.26■□□□□ 0.03
SYT1-204ENST00000457153 LRRC1Q9BTT6 524 aa15.26■□□□□ 0.03
SYT1-204ENST00000457153 ODF2LQ9ULJ1 636 aa15.26■□□□□ 0.03
SYT1-204ENST00000457153 ZRANB2O95218 330 aaKnown RBP eCLIP15.26■□□□□ 0.03
SYT1-204ENST00000457153 NDUFB10O96000 172 aa15.26■□□□□ 0.03
SYT1-204ENST00000457153 ATP2A2P16615 1042 aaKnown RBP15.26■□□□□ 0.03
SYT1-204ENST00000457153 POLD1P28340 1107 aa15.26■□□□□ 0.03
SYT1-204ENST00000457153 LIG4P49917 911 aa15.26■□□□□ 0.03
SYT1-204ENST00000457153 PMS1P54277 932 aaKnown RBP15.26■□□□□ 0.03
SYT1-204ENST00000457153 CACNA2D3Q8IZS8 1091 aa15.26■□□□□ 0.03
SYT1-204ENST00000457153 CDHR1Q96JP9 859 aa15.26■□□□□ 0.03
SYT1-204ENST00000457153 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.26■□□□□ 0.03
SYT1-204ENST00000457153 SLITRK6Q9H5Y7 841 aa15.26■□□□□ 0.03
SYT1-204ENST00000457153 A0A087WUV0 522 aaPredicted RBP15.26■□□□□ 0.03
SYT1-204ENST00000457153 ZNF185O15231 689 aa15.26■□□□□ 0.03
SYT1-204ENST00000457153 PTK2Q05397 1052 aa15.26■□□□□ 0.03
SYT1-204ENST00000457153 NAB2Q15742 525 aa15.26■□□□□ 0.03
SYT1-204ENST00000457153 MESDQ14696 234 aa15.25■□□□□ 0.03
SYT1-204ENST00000457153 ZNF662Q6ZS27 426 aa15.25■□□□□ 0.03
SYT1-204ENST00000457153 LRRN4CLQ8ND94 238 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms