RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 JRKLQ9Y4A0 524 aa13.66□□□□□ -0.22
LINC00959-201ENST00000456581 TACC1O75410 805 aa13.65□□□□□ -0.22
LINC00959-201ENST00000456581 CAP2P40123 477 aa13.65□□□□□ -0.22
LINC00959-201ENST00000456581 CARSP49589 748 aaKnown RBP13.65□□□□□ -0.22
LINC00959-201ENST00000456581 CIAPIN1Q6FI81 312 aa13.65□□□□□ -0.22
LINC00959-201ENST00000456581 ETNPPLQ8TBG4 499 aa13.65□□□□□ -0.22
LINC00959-201ENST00000456581 SLC16A10Q8TF71 515 aa13.65□□□□□ -0.22
LINC00959-201ENST00000456581 NUP58Q9BVL2 599 aa13.65□□□□□ -0.22
LINC00959-201ENST00000456581 TAOK3Q9H2K8 898 aa13.65□□□□□ -0.22
LINC00959-201ENST00000456581 MAGEF1Q9HAY2 307 aa13.65□□□□□ -0.22
LINC00959-201ENST00000456581 PGAP2Q9UHJ9 254 aa13.65□□□□□ -0.22
LINC00959-201ENST00000456581 FAM184BQ9ULE4 1060 aa13.65□□□□□ -0.22
LINC00959-201ENST00000456581 BACH1O14867 736 aa13.65□□□□□ -0.22
LINC00959-201ENST00000456581 TLR2O60603 784 aa13.65□□□□□ -0.22
LINC00959-201ENST00000456581 GNGT1P63211 74 aa13.65□□□□□ -0.22
LINC00959-201ENST00000456581 TUBB4BP68371 445 aa13.65□□□□□ -0.22
LINC00959-201ENST00000456581 KCNMA1Q12791 1236 aa13.65□□□□□ -0.22
LINC00959-201ENST00000456581 TTC31Q49AM3 519 aaPredicted RBP13.65□□□□□ -0.22
LINC00959-201ENST00000456581 TBC1D10BQ4KMP7 808 aaPredicted RBP13.65□□□□□ -0.22
LINC00959-201ENST00000456581 CENPPQ6IPU0 288 aa13.65□□□□□ -0.22
LINC00959-201ENST00000456581 BTNL9Q6UXG8 535 aa13.65□□□□□ -0.22
LINC00959-201ENST00000456581 TRIM58Q8NG06 486 aa13.65□□□□□ -0.22
LINC00959-201ENST00000456581 BCAS4Q8TDM0 211 aa13.65□□□□□ -0.22
LINC00959-201ENST00000456581 DNAJC19Q96DA6 116 aa13.65□□□□□ -0.22
LINC00959-201ENST00000456581 STK17AQ9UEE5 414 aa13.65□□□□□ -0.22
LINC00959-201ENST00000456581 NFU1Q9UMS0 254 aa13.65□□□□□ -0.22
LINC00959-201ENST00000456581 ANO9A1A5B4 782 aa13.64□□□□□ -0.23
LINC00959-201ENST00000456581 GCFC2P16383 781 aaKnown RBP13.64□□□□□ -0.23
LINC00959-201ENST00000456581 USP11P51784 963 aa13.64□□□□□ -0.23
LINC00959-201ENST00000456581 SPIRE1Q08AE8 756 aa13.64□□□□□ -0.23
LINC00959-201ENST00000456581 KLHDC7AQ5VTJ3 777 aa13.64□□□□□ -0.23
LINC00959-201ENST00000456581 LRRC55Q6ZSA7 311 aa13.64□□□□□ -0.23
LINC00959-201ENST00000456581 CACNA2D4Q7Z3S7 1137 aa13.64□□□□□ -0.23
LINC00959-201ENST00000456581 AGBL3Q8NEM8 1001 aa13.64□□□□□ -0.23
LINC00959-201ENST00000456581 JDP2Q8WYK2 163 aa13.64□□□□□ -0.23
LINC00959-201ENST00000456581 GJA3Q9Y6H8 435 aa13.64□□□□□ -0.23
LINC00959-201ENST00000456581 USO1O60763 962 aaKnown RBP13.64□□□□□ -0.23
LINC00959-201ENST00000456581 INPP5BP32019 993 aa13.64□□□□□ -0.23
LINC00959-201ENST00000456581 SF3A3Q12874 501 aaKnown RBP eCLIP13.64□□□□□ -0.23
LINC00959-201ENST00000456581 R3HDM1Q15032 1099 aaKnown RBP13.64□□□□□ -0.23
LINC00959-201ENST00000456581 CNNM4Q6P4Q7 775 aa13.64□□□□□ -0.23
LINC00959-201ENST00000456581 UNC13DQ70J99 1090 aa13.64□□□□□ -0.23
LINC00959-201ENST00000456581 ZNF341Q9BYN7 854 aa13.64□□□□□ -0.23
LINC00959-201ENST00000456581 ZHX3Q9H4I2 956 aa13.64□□□□□ -0.23
LINC00959-201ENST00000456581 LRRC4CQ9HCJ2 640 aa13.64□□□□□ -0.23
LINC00959-201ENST00000456581 MSH4O15457 936 aa13.63□□□□□ -0.23
LINC00959-201ENST00000456581 ZEB2O60315 1214 aa13.63□□□□□ -0.23
LINC00959-201ENST00000456581 HGSNATQ68CP4 663 aa13.63□□□□□ -0.23
LINC00959-201ENST00000456581 CATSPER3Q86XQ3 398 aa13.63□□□□□ -0.23
LINC00959-201ENST00000456581 RETREG2Q8NC44 543 aa13.63□□□□□ -0.23
LINC00959-201ENST00000456581 NOC3LQ8WTT2 800 aaKnown RBP13.63□□□□□ -0.23
LINC00959-201ENST00000456581 ZBED3Q96IU2 234 aaPredicted RBP13.63□□□□□ -0.23
LINC00959-201ENST00000456581 AGBL1Q96MI9 1066 aa13.63□□□□□ -0.23
LINC00959-201ENST00000456581 VCPKMTQ9H867 229 aa13.63□□□□□ -0.23
LINC00959-201ENST00000456581 RGL1Q9NZL6 768 aa13.63□□□□□ -0.23
LINC00959-201ENST00000456581 EML1O00423 815 aa13.63□□□□□ -0.23
LINC00959-201ENST00000456581 PALMO75781 387 aa13.63□□□□□ -0.23
LINC00959-201ENST00000456581 TUBBP07437 444 aa13.63□□□□□ -0.23
LINC00959-201ENST00000456581 GUCY1A3Q02108 690 aa13.63□□□□□ -0.23
LINC00959-201ENST00000456581 PABPC4Q13310 644 aaKnown RBP eCLIP13.63□□□□□ -0.23
LINC00959-201ENST00000456581 C8orf74Q6P047 294 aa13.63□□□□□ -0.23
LINC00959-201ENST00000456581 FAM114A1Q8IWE2 563 aa13.63□□□□□ -0.23
LINC00959-201ENST00000456581 ZIM3Q96PE6 472 aa13.63□□□□□ -0.23
LINC00959-201ENST00000456581 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.63□□□□□ -0.23
LINC00959-201ENST00000456581 TSPYL1Q9H0U9 437 aa13.63□□□□□ -0.23
LINC00959-201ENST00000456581 GOPCQ9HD26 462 aa13.63□□□□□ -0.23
LINC00959-201ENST00000456581 STIM2Q9P246 746 aa13.63□□□□□ -0.23
LINC00959-201ENST00000456581 CYP3A7-CYP3A51PA0A087WV96 503 aa13.63□□□□□ -0.23
LINC00959-201ENST00000456581 ZBTB39O15060 712 aa13.63□□□□□ -0.23
LINC00959-201ENST00000456581 CHMP2AO43633 222 aa13.63□□□□□ -0.23
LINC00959-201ENST00000456581 NOL4O94818 638 aa13.63□□□□□ -0.23
LINC00959-201ENST00000456581 PLA2G4BP0C869 781 aa13.63□□□□□ -0.23
LINC00959-201ENST00000456581 CYP3A7P24462 503 aa13.63□□□□□ -0.23
LINC00959-201ENST00000456581 ZNF76P36508 570 aa13.63□□□□□ -0.23
LINC00959-201ENST00000456581 SREBF1P36956 1147 aa13.63□□□□□ -0.23
LINC00959-201ENST00000456581 SEC24CP53992 1094 aa13.63□□□□□ -0.23
LINC00959-201ENST00000456581 POLR2FP61218 127 aaKnown RBP13.63□□□□□ -0.23
LINC00959-201ENST00000456581 GUCY2DQ02846 1103 aa13.63□□□□□ -0.23
LINC00959-201ENST00000456581 COASYQ13057 564 aa13.63□□□□□ -0.23
LINC00959-201ENST00000456581 AP3B2Q13367 1082 aa13.63□□□□□ -0.23
LINC00959-201ENST00000456581 GPBP1Q86WP2 473 aa13.63□□□□□ -0.23
LINC00959-201ENST00000456581 MMGT1Q8N4V1 131 aa13.63□□□□□ -0.23
LINC00959-201ENST00000456581 WDR18Q9BV38 432 aa13.63□□□□□ -0.23
LINC00959-201ENST00000456581 FAM169AQ9Y6X4 670 aa13.63□□□□□ -0.23
LINC00959-201ENST00000456581 TRAF5O00463 557 aa13.62□□□□□ -0.23
LINC00959-201ENST00000456581 SPATA31C1P0DKV0 1188 aa13.62□□□□□ -0.23
LINC00959-201ENST00000456581 IBSPP21815 317 aaPredicted RBP13.62□□□□□ -0.23
LINC00959-201ENST00000456581 KLRC1P26715 233 aa13.62□□□□□ -0.23
LINC00959-201ENST00000456581 MAN2A1Q16706 1144 aa13.62□□□□□ -0.23
LINC00959-201ENST00000456581 ARSHQ5FYA8 562 aa13.62□□□□□ -0.23
LINC00959-201ENST00000456581 ZNF662Q6ZS27 426 aa13.62□□□□□ -0.23
LINC00959-201ENST00000456581 MBOAT7Q96N66 472 aa13.62□□□□□ -0.23
LINC00959-201ENST00000456581 CAPS2Q9BXY5 557 aa13.62□□□□□ -0.23
LINC00959-201ENST00000456581 EPB41L5Q9HCM4 733 aa13.62□□□□□ -0.23
LINC00959-201ENST00000456581 HYOU1Q9Y4L1 999 aa13.62□□□□□ -0.23
LINC00959-201ENST00000456581 A0A1W2PQJ5 194 aa13.62□□□□□ -0.23
LINC00959-201ENST00000456581 ACTN1P12814 892 aa13.62□□□□□ -0.23
LINC00959-201ENST00000456581 POLD1P28340 1107 aa13.62□□□□□ -0.23
LINC00959-201ENST00000456581 EHHADHQ08426 723 aa13.62□□□□□ -0.23
LINC00959-201ENST00000456581 CPXCR1Q8N123 301 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms