RNA–Protein interactions for RNA: ENST00000456385.5

CLIP4-208, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 2,311 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-208ENST00000456385 ALKBH5Q6P6C2 394 aaKnown RBP11.23□□□□□ -0.61
CLIP4-208ENST00000456385 NEK8Q86SG6 692 aa11.23□□□□□ -0.61
CLIP4-208ENST00000456385 EGFL6Q8IUX8 553 aa11.23□□□□□ -0.61
CLIP4-208ENST00000456385 CCDC26Q8TAB7 109 aa11.23□□□□□ -0.61
CLIP4-208ENST00000456385 MICAL1Q8TDZ2 1067 aa11.23□□□□□ -0.61
CLIP4-208ENST00000456385 GLG1Q92896 1179 aa11.23□□□□□ -0.61
CLIP4-208ENST00000456385 RNF25Q96BH1 459 aaPredicted RBP11.23□□□□□ -0.61
CLIP4-208ENST00000456385 CDK5RAP3Q96JB5 506 aa11.23□□□□□ -0.61
CLIP4-208ENST00000456385 NLRP3Q96P20 1036 aa11.23□□□□□ -0.61
CLIP4-208ENST00000456385 GANQ9H2C0 597 aa11.23□□□□□ -0.61
CLIP4-208ENST00000456385 INTS9Q9NV88 658 aaKnown RBP11.23□□□□□ -0.61
CLIP4-208ENST00000456385 NAGPAQ9UK23 515 aa11.23□□□□□ -0.61
CLIP4-208ENST00000456385 AFF2P51816 1311 aa11.23□□□□□ -0.61
CLIP4-208ENST00000456385 CACNA1SQ13698 1873 aa11.23□□□□□ -0.61
CLIP4-208ENST00000456385 SPDYE3A6NKU9 549 aa11.23□□□□□ -0.61
CLIP4-208ENST00000456385 KIF3CO14782 793 aa11.23□□□□□ -0.61
CLIP4-208ENST00000456385 NQO1P15559 274 aaKnown RBP11.23□□□□□ -0.61
CLIP4-208ENST00000456385 SLC9A1P19634 815 aa11.23□□□□□ -0.61
CLIP4-208ENST00000456385 SLCO1A2P46721 670 aa11.23□□□□□ -0.61
CLIP4-208ENST00000456385 NCALDP61601 193 aa11.23□□□□□ -0.61
CLIP4-208ENST00000456385 CACNB1Q02641 598 aaPredicted RBP11.23□□□□□ -0.61
CLIP4-208ENST00000456385 MECOMQ03112 1051 aa11.23□□□□□ -0.61
CLIP4-208ENST00000456385 GRM4Q14833 912 aa11.23□□□□□ -0.61
CLIP4-208ENST00000456385 CAPRIN2Q6IMN6 1127 aaKnown RBP11.23□□□□□ -0.61
CLIP4-208ENST00000456385 ARHGAP27Q6ZUM4 889 aa11.23□□□□□ -0.61
CLIP4-208ENST00000456385 MAEAQ7L5Y9 396 aa11.23□□□□□ -0.61
CLIP4-208ENST00000456385 ERICH1Q86X53 443 aa11.23□□□□□ -0.61
CLIP4-208ENST00000456385 TRIM59Q8IWR1 403 aa11.23□□□□□ -0.61
CLIP4-208ENST00000456385 RASGEF1CQ8N431 466 aa11.23□□□□□ -0.61
CLIP4-208ENST00000456385 RNF217Q8TC41 542 aa11.23□□□□□ -0.61
CLIP4-208ENST00000456385 GJA10Q969M2 543 aa11.23□□□□□ -0.61
CLIP4-208ENST00000456385 ACSBG1Q96GR2 724 aa11.23□□□□□ -0.61
CLIP4-208ENST00000456385 ZMYND12Q9H0C1 365 aa11.23□□□□□ -0.61
CLIP4-208ENST00000456385 SLITRK6Q9H5Y7 841 aa11.23□□□□□ -0.61
CLIP4-208ENST00000456385 RIC8AQ9NPQ8 531 aa11.23□□□□□ -0.61
CLIP4-208ENST00000456385 BATF3Q9NR55 127 aa11.23□□□□□ -0.61
CLIP4-208ENST00000456385 TMEM260Q9NX78 707 aa11.23□□□□□ -0.61
CLIP4-208ENST00000456385 NOP53Q9NZM5 478 aaKnown RBP11.23□□□□□ -0.61
CLIP4-208ENST00000456385 THRAP3Q9Y2W1 955 aaKnown RBP11.23□□□□□ -0.61
CLIP4-208ENST00000456385 ZNF804BA4D1E1 1349 aa11.22□□□□□ -0.61
CLIP4-208ENST00000456385 MYH4Q9Y623 1939 aa11.22□□□□□ -0.61
CLIP4-208ENST00000456385 BTNL10A8MVZ5 291 aa11.22□□□□□ -0.61
CLIP4-208ENST00000456385 IGF2BP3O00425 579 aaKnown RBP eCLIP11.22□□□□□ -0.61
CLIP4-208ENST00000456385 SLC37A4O43826 429 aa11.22□□□□□ -0.61
CLIP4-208ENST00000456385 SMNDC1O75940 238 aaKnown RBP eCLIP11.22□□□□□ -0.61
CLIP4-208ENST00000456385 PLTPP55058 493 aa11.22□□□□□ -0.61
CLIP4-208ENST00000456385 EIF3BP55884 814 aaKnown RBP11.22□□□□□ -0.61
CLIP4-208ENST00000456385 COASYQ13057 564 aa11.22□□□□□ -0.61
CLIP4-208ENST00000456385 PRPF4BQ13523 1007 aaKnown RBP11.22□□□□□ -0.61
CLIP4-208ENST00000456385 SLC29A2Q14542 456 aa11.22□□□□□ -0.61
CLIP4-208ENST00000456385 CCDC38Q502W7 563 aa11.22□□□□□ -0.61
CLIP4-208ENST00000456385 GALNT17Q6IS24 598 aa11.22□□□□□ -0.61
CLIP4-208ENST00000456385 MIS18BP1Q6P0N0 1132 aa11.22□□□□□ -0.61
CLIP4-208ENST00000456385 PROM2Q8N271 834 aa11.22□□□□□ -0.61
CLIP4-208ENST00000456385 RBM46Q8TBY0 533 aaKnown RBP11.22□□□□□ -0.61
CLIP4-208ENST00000456385 RAD54LQ92698 747 aa11.22□□□□□ -0.61
CLIP4-208ENST00000456385 NSUN4Q96CB9 384 aaKnown RBP11.22□□□□□ -0.61
CLIP4-208ENST00000456385 ECT2Q9H8V3 914 aa11.22□□□□□ -0.61
CLIP4-208ENST00000456385 FAM114A2Q9NRY5 505 aa11.22□□□□□ -0.61
CLIP4-208ENST00000456385 MCM9Q9NXL9 1143 aa11.22□□□□□ -0.61
CLIP4-208ENST00000456385 STK38LQ9Y2H1 464 aa11.22□□□□□ -0.61
CLIP4-208ENST00000456385 STXBP5LQ9Y2K9 1186 aa11.22□□□□□ -0.61
CLIP4-208ENST00000456385 CFAP73A6NFT4 308 aa11.21□□□□□ -0.61
CLIP4-208ENST00000456385 HGSO14964 777 aaPredicted RBP11.21□□□□□ -0.61
CLIP4-208ENST00000456385 KRT16P08779 473 aa11.21□□□□□ -0.61
CLIP4-208ENST00000456385 ALADP13716 330 aa11.21□□□□□ -0.61
CLIP4-208ENST00000456385 SARNPP82979 210 aaKnown RBP11.21□□□□□ -0.61
CLIP4-208ENST00000456385 KCNH2Q12809 1159 aa11.21□□□□□ -0.61
CLIP4-208ENST00000456385 LRRC14Q15048 493 aa11.21□□□□□ -0.61
CLIP4-208ENST00000456385 KRT25Q7Z3Z0 450 aa11.21□□□□□ -0.61
CLIP4-208ENST00000456385 NT5DC3Q86UY8 548 aa11.21□□□□□ -0.61
CLIP4-208ENST00000456385 HOOK3Q86VS8 718 aa11.21□□□□□ -0.61
CLIP4-208ENST00000456385 PARD3BQ8TEW8 1205 aa11.21□□□□□ -0.61
CLIP4-208ENST00000456385 FAM167BQ9BTA0 163 aa11.21□□□□□ -0.61
CLIP4-208ENST00000456385 CCDC113Q9H0I3 377 aa11.21□□□□□ -0.61
CLIP4-208ENST00000456385 ARHGEF10LQ9HCE6 1279 aa11.21□□□□□ -0.61
CLIP4-208ENST00000456385 VAT1LQ9HCJ6 419 aa11.21□□□□□ -0.61
CLIP4-208ENST00000456385 ERVK-5Q9HDB9 667 aa11.21□□□□□ -0.61
CLIP4-208ENST00000456385 ZDHHC18Q9NUE0 388 aa11.21□□□□□ -0.61
CLIP4-208ENST00000456385 SLC5A4Q9NY91 659 aa11.21□□□□□ -0.61
CLIP4-208ENST00000456385 STX8Q9UNK0 236 aa11.21□□□□□ -0.61
CLIP4-208ENST00000456385 TRIM33Q9UPN9 1127 aa11.21□□□□□ -0.61
CLIP4-208ENST00000456385 JAG2Q9Y219 1238 aa11.21□□□□□ -0.61
CLIP4-208ENST00000456385 COL4A1P02462 1669 aa11.21□□□□□ -0.61
CLIP4-208ENST00000456385 RGS16O15492 202 aaPredicted RBP11.21□□□□□ -0.62
CLIP4-208ENST00000456385 EPS15P42566 896 aa11.21□□□□□ -0.62
CLIP4-208ENST00000456385 PMS2P54278 862 aa11.21□□□□□ -0.62
CLIP4-208ENST00000456385 CALCRLQ16602 461 aa11.21□□□□□ -0.62
CLIP4-208ENST00000456385 CCDC152Q4G0S7 254 aa11.21□□□□□ -0.62
CLIP4-208ENST00000456385 DCAF12L1Q5VU92 463 aa11.21□□□□□ -0.62
CLIP4-208ENST00000456385 DGKHQ86XP1 1220 aa11.21□□□□□ -0.62
CLIP4-208ENST00000456385 FBXO25Q8TCJ0 367 aa11.21□□□□□ -0.62
CLIP4-208ENST00000456385 NEK9Q8TD19 979 aa11.21□□□□□ -0.62
CLIP4-208ENST00000456385 CCHCR1Q8TD31 782 aa11.21□□□□□ -0.62
CLIP4-208ENST00000456385 EPS8L3Q8TE67 593 aaKnown RBP11.21□□□□□ -0.62
CLIP4-208ENST00000456385 SNX29Q8TEQ0 813 aa11.21□□□□□ -0.62
CLIP4-208ENST00000456385 DNAJC19Q96DA6 116 aa11.21□□□□□ -0.62
CLIP4-208ENST00000456385 MTMR9Q96QG7 549 aa11.21□□□□□ -0.62
CLIP4-208ENST00000456385 UIMC1Q96RL1 719 aa11.21□□□□□ -0.62
CLIP4-208ENST00000456385 CRNKL1Q9BZJ0 848 aaKnown RBP11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms