RNA–Protein interactions for RNA: ENST00000456210.5

SEMA3B-208, Transcript of semaphorin 3B, humanhuman

TSL 2

Gene SEMA3B, Length 2,065 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-208ENST00000456210 A0A1B0GUA9 196 aa20.63■□□□□ 0.89
SEMA3B-208ENST00000456210 CCDC189A1A4V9 331 aa20.63■□□□□ 0.89
SEMA3B-208ENST00000456210 KRIT1O00522 736 aa20.63■□□□□ 0.89
SEMA3B-208ENST00000456210 OPLAHO14841 1288 aa20.63■□□□□ 0.89
SEMA3B-208ENST00000456210 PPFIA2O75334 1257 aa20.63■□□□□ 0.89
SEMA3B-208ENST00000456210 USP17L8P0C7I0 530 aa20.63■□□□□ 0.89
SEMA3B-208ENST00000456210 ANXA13P27216 316 aa20.63■□□□□ 0.89
SEMA3B-208ENST00000456210 ITIH4Q14624 930 aa20.63■□□□□ 0.89
SEMA3B-208ENST00000456210 MSL1Q68DK7 614 aa20.63■□□□□ 0.89
SEMA3B-208ENST00000456210 CRELD2Q6UXH1 353 aaPredicted RBP20.63■□□□□ 0.89
SEMA3B-208ENST00000456210 CCDC197Q8NCU1 140 aa20.63■□□□□ 0.89
SEMA3B-208ENST00000456210 ZNF622Q969S3 477 aaKnown RBP eCLIP20.63■□□□□ 0.89
SEMA3B-208ENST00000456210 DNAJC19Q96DA6 116 aa20.63■□□□□ 0.89
SEMA3B-208ENST00000456210 ZNF317Q96PQ6 595 aaPredicted RBP20.63■□□□□ 0.89
SEMA3B-208ENST00000456210 RAB34Q9BZG1 259 aa20.63■□□□□ 0.89
SEMA3B-208ENST00000456210 BSDC1Q9NW68 430 aaPredicted RBP20.63■□□□□ 0.89
SEMA3B-208ENST00000456210 NENFQ9UMX5 172 aa20.63■□□□□ 0.89
SEMA3B-208ENST00000456210 SLC12A4Q9UP95 1085 aa20.63■□□□□ 0.89
SEMA3B-208ENST00000456210 STXBP5LQ9Y2K9 1186 aa20.63■□□□□ 0.89
SEMA3B-208ENST00000456210 KLRF2D3W0D1 207 aa20.62■□□□□ 0.89
SEMA3B-208ENST00000456210 ASAP2O43150 1006 aa20.62■□□□□ 0.89
SEMA3B-208ENST00000456210 TPCN2Q8NHX9 752 aa20.62■□□□□ 0.89
SEMA3B-208ENST00000456210 FAXDC2Q96IV6 333 aa20.62■□□□□ 0.89
SEMA3B-208ENST00000456210 TMEM47Q9BQJ4 181 aa20.62■□□□□ 0.89
SEMA3B-208ENST00000456210 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.62■□□□□ 0.89
SEMA3B-208ENST00000456210 USP17L3A6NCW0 530 aa20.62■□□□□ 0.89
SEMA3B-208ENST00000456210 USP17L4A6NCW7 530 aa20.62■□□□□ 0.89
SEMA3B-208ENST00000456210 BACH1O14867 736 aa20.62■□□□□ 0.89
SEMA3B-208ENST00000456210 SLC8A3P57103 927 aa20.62■□□□□ 0.89
SEMA3B-208ENST00000456210 ARID5AQ03989 594 aa20.62■□□□□ 0.89
SEMA3B-208ENST00000456210 PTK2Q05397 1052 aa20.62■□□□□ 0.89
SEMA3B-208ENST00000456210 DHX9Q08211 1270 aaKnown RBP20.62■□□□□ 0.89
SEMA3B-208ENST00000456210 RIPK1Q13546 671 aa20.62■□□□□ 0.89
SEMA3B-208ENST00000456210 SLC27A3Q5K4L6 730 aa20.62■□□□□ 0.89
SEMA3B-208ENST00000456210 USP17L1Q7RTZ2 530 aa20.62■□□□□ 0.89
SEMA3B-208ENST00000456210 IRF2BP2Q7Z5L9 587 aa20.62■□□□□ 0.89
SEMA3B-208ENST00000456210 HOOK3Q86VS8 718 aa20.62■□□□□ 0.89
SEMA3B-208ENST00000456210 NOD2Q9HC29 1040 aa20.62■□□□□ 0.89
SEMA3B-208ENST00000456210 SUCLA2Q9P2R7 463 aaPredicted RBP20.62■□□□□ 0.89
SEMA3B-208ENST00000456210 AMACRQ9UHK6 382 aa20.62■□□□□ 0.89
SEMA3B-208ENST00000456210 A0A0A6YYK5 440 aaPredicted RBP20.61■□□□□ 0.89
SEMA3B-208ENST00000456210 GNPATO15228 680 aa20.61■□□□□ 0.89
SEMA3B-208ENST00000456210 RPS6KA4O75676 772 aa20.61■□□□□ 0.89
SEMA3B-208ENST00000456210 POU5F1Q01860 360 aaKnown RBP20.61■□□□□ 0.89
SEMA3B-208ENST00000456210 E2F5Q15329 346 aa20.61■□□□□ 0.89
SEMA3B-208ENST00000456210 FAM26FQ5R3K3 315 aa20.61■□□□□ 0.89
SEMA3B-208ENST00000456210 SOGA3Q5TF21 947 aa20.61■□□□□ 0.89
SEMA3B-208ENST00000456210 ZNF571Q7Z3V5 609 aaPredicted RBP20.61■□□□□ 0.89
SEMA3B-208ENST00000456210 KCNK18Q7Z418 384 aa20.61■□□□□ 0.89
SEMA3B-208ENST00000456210 REXO1Q8N1G1 1221 aaKnown RBP20.61■□□□□ 0.89
SEMA3B-208ENST00000456210 SNX29Q8TEQ0 813 aa20.61■□□□□ 0.89
SEMA3B-208ENST00000456210 CUL5Q93034 780 aa20.61■□□□□ 0.89
SEMA3B-208ENST00000456210 HOOK2Q96ED9 719 aa20.61■□□□□ 0.89
SEMA3B-208ENST00000456210 NAGPAQ9UK23 515 aa20.61■□□□□ 0.89
SEMA3B-208ENST00000456210 RTN2O75298 545 aa20.6■□□□□ 0.89
SEMA3B-208ENST00000456210 TSPY3P0CV98 308 aa20.6■□□□□ 0.89
SEMA3B-208ENST00000456210 TSPY8P0CW00 308 aa20.6■□□□□ 0.89
SEMA3B-208ENST00000456210 SMARCA1P28370 1054 aa20.6■□□□□ 0.89
SEMA3B-208ENST00000456210 CLNS1AP54105 237 aaKnown RBP20.6■□□□□ 0.89
SEMA3B-208ENST00000456210 KRT79Q5XKE5 535 aa20.6■□□□□ 0.89
SEMA3B-208ENST00000456210 DPY19L2P1Q6NXN4 242 aa20.6■□□□□ 0.89
SEMA3B-208ENST00000456210 ANKS4BQ8N8V4 417 aa20.6■□□□□ 0.89
SEMA3B-208ENST00000456210 MAB21L3Q8N8X9 362 aa20.6■□□□□ 0.89
SEMA3B-208ENST00000456210 EBF2Q9HAK2 575 aa20.6■□□□□ 0.89
SEMA3B-208ENST00000456210 NARFQ9UHQ1 456 aa20.6■□□□□ 0.89
SEMA3B-208ENST00000456210 TTC7AQ9ULT0 858 aaPredicted RBP20.6■□□□□ 0.89
SEMA3B-208ENST00000456210 MINPP1Q9UNW1 487 aa20.6■□□□□ 0.89
SEMA3B-208ENST00000456210 UTP11Q9Y3A2 253 aaKnown RBP20.6■□□□□ 0.89
SEMA3B-208ENST00000456210 NUDT17P0C025 328 aa20.6■□□□□ 0.89
SEMA3B-208ENST00000456210 ITGA4P13612 1032 aa20.6■□□□□ 0.89
SEMA3B-208ENST00000456210 PRKCIP41743 596 aa20.6■□□□□ 0.89
SEMA3B-208ENST00000456210 ERFEQ4G0M1 354 aa20.6■□□□□ 0.89
SEMA3B-208ENST00000456210 PIGWQ7Z7B1 504 aa20.6■□□□□ 0.89
SEMA3B-208ENST00000456210 LMBR1Q8WVP7 490 aa20.6■□□□□ 0.89
SEMA3B-208ENST00000456210 GOLPH3Q9H4A6 298 aa20.6■□□□□ 0.89
SEMA3B-208ENST00000456210 TTI1O43156 1089 aa20.59■□□□□ 0.89
SEMA3B-208ENST00000456210 PRDX5P30044 214 aa20.59■□□□□ 0.89
SEMA3B-208ENST00000456210 ATP8B4Q8TF62 1192 aa20.59■□□□□ 0.89
SEMA3B-208ENST00000456210 TBC1D22AQ8WUA7 517 aa20.59■□□□□ 0.89
SEMA3B-208ENST00000456210 NUDT12Q9BQG2 462 aa20.59■□□□□ 0.89
SEMA3B-208ENST00000456210 CFAP73A6NFT4 308 aa20.58■□□□□ 0.89
SEMA3B-208ENST00000456210 POTEMA6NI47 508 aa20.58■□□□□ 0.89
SEMA3B-208ENST00000456210 SLC37A4O43826 429 aa20.58■□□□□ 0.89
SEMA3B-208ENST00000456210 CTNND1O60716 968 aaKnown RBP20.58■□□□□ 0.89
SEMA3B-208ENST00000456210 ATP2C2O75185 946 aa20.58■□□□□ 0.89
SEMA3B-208ENST00000456210 GOLGA8HP0CJ92 632 aa20.58■□□□□ 0.89
SEMA3B-208ENST00000456210 NPEPPSP55786 919 aa20.58■□□□□ 0.89
SEMA3B-208ENST00000456210 SF3B3Q15393 1217 aaKnown RBP20.58■□□□□ 0.89
SEMA3B-208ENST00000456210 PEX26Q7Z412 305 aa20.58■□□□□ 0.89
SEMA3B-208ENST00000456210 FMNL3Q8IVF7 1028 aa20.58■□□□□ 0.89
SEMA3B-208ENST00000456210 SYCE1Q8N0S2 351 aa20.58■□□□□ 0.89
SEMA3B-208ENST00000456210 CCHCR1Q8TD31 782 aa20.58■□□□□ 0.89
SEMA3B-208ENST00000456210 ATXN2LQ8WWM7 1075 aaKnown RBP20.58■□□□□ 0.89
SEMA3B-208ENST00000456210 DYNLL2Q96FJ2 89 aa20.58■□□□□ 0.89
SEMA3B-208ENST00000456210 PGM2Q96G03 612 aa20.58■□□□□ 0.89
SEMA3B-208ENST00000456210 FMO2Q99518 471 aa20.58■□□□□ 0.89
SEMA3B-208ENST00000456210 CCDC134Q9H6E4 229 aa20.58■□□□□ 0.89
SEMA3B-208ENST00000456210 MKNK2Q9HBH9 465 aa20.58■□□□□ 0.89
SEMA3B-208ENST00000456210 LRRC4CQ9HCJ2 640 aa20.58■□□□□ 0.89
SEMA3B-208ENST00000456210 PANK4Q9NVE7 773 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms