RNA–Protein interactions for RNA: ENST00000455996.6

TMEM220-202, Transcript of transmembrane protein 220, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TMEM220, Length 1,402 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM220-202ENST00000455996 CPA4Q9UI42 421 aa17.93■□□□□ 0.46
TMEM220-202ENST00000455996 ABT1Q9ULW3 272 aaKnown RBP17.93■□□□□ 0.46
TMEM220-202ENST00000455996 MAPK8IP1Q9UQF2 711 aa17.93■□□□□ 0.46
TMEM220-202ENST00000455996 COL4A3BPQ9Y5P4 624 aa17.93■□□□□ 0.46
TMEM220-202ENST00000455996 ZNFX1Q9P2E3 1918 aaKnown RBP17.93■□□□□ 0.46
TMEM220-202ENST00000455996 IGSF9BQ9UPX0 1349 aa17.93■□□□□ 0.46
TMEM220-202ENST00000455996 RBM47A0AV96 593 aaKnown RBP17.92■□□□□ 0.46
TMEM220-202ENST00000455996 ZNF862O60290 1169 aa17.92■□□□□ 0.46
TMEM220-202ENST00000455996 PMS1P54277 932 aaKnown RBP17.92■□□□□ 0.46
TMEM220-202ENST00000455996 METTL7BQ6UX53 244 aa17.92■□□□□ 0.46
TMEM220-202ENST00000455996 MYOCDQ8IZQ8 938 aa17.92■□□□□ 0.46
TMEM220-202ENST00000455996 NOC3LQ8WTT2 800 aaKnown RBP17.92■□□□□ 0.46
TMEM220-202ENST00000455996 VTA1Q9NP79 307 aa17.92■□□□□ 0.46
TMEM220-202ENST00000455996 OLFML3Q9NRN5 406 aa17.92■□□□□ 0.46
TMEM220-202ENST00000455996 GABBR1Q9UBS5 961 aa17.92■□□□□ 0.46
TMEM220-202ENST00000455996 SEL1LQ9UBV2 794 aa17.92■□□□□ 0.46
TMEM220-202ENST00000455996 TELO2Q9Y4R8 837 aa17.92■□□□□ 0.46
TMEM220-202ENST00000455996 TBCAO75347 108 aaKnown RBP17.91■□□□□ 0.46
TMEM220-202ENST00000455996 ARIH2O95376 493 aa17.91■□□□□ 0.46
TMEM220-202ENST00000455996 MORN1Q5T089 497 aa17.91■□□□□ 0.46
TMEM220-202ENST00000455996 PADI6Q6TGC4 694 aa17.91■□□□□ 0.46
TMEM220-202ENST00000455996 EPM2AIP1Q7L775 607 aaPredicted RBP17.91■□□□□ 0.46
TMEM220-202ENST00000455996 APTXQ7Z2E3 356 aaKnown RBP17.91■□□□□ 0.46
TMEM220-202ENST00000455996 CCDC60Q8IWA6 550 aaPredicted RBP17.91■□□□□ 0.46
TMEM220-202ENST00000455996 MSL3Q8N5Y2 521 aaKnown RBP17.91■□□□□ 0.46
TMEM220-202ENST00000455996 DUSP9Q99956 384 aaKnown RBP17.91■□□□□ 0.46
TMEM220-202ENST00000455996 KATNBL1Q9H079 304 aa17.91■□□□□ 0.46
TMEM220-202ENST00000455996 SEMA6BQ9H3T3 888 aa17.91■□□□□ 0.46
TMEM220-202ENST00000455996 THAP9Q9H5L6 903 aa17.91■□□□□ 0.46
TMEM220-202ENST00000455996 ZFYVE28Q9HCC9 887 aa17.91■□□□□ 0.46
TMEM220-202ENST00000455996 IFNKQ9P0W0 207 aa17.91■□□□□ 0.46
TMEM220-202ENST00000455996 MAFBQ9Y5Q3 323 aaPredicted RBP17.91■□□□□ 0.46
TMEM220-202ENST00000455996 GSTTP1A0A1W2PQM5 241 aa17.9■□□□□ 0.46
TMEM220-202ENST00000455996 LRRC10BA6NIK2 292 aa17.9■□□□□ 0.46
TMEM220-202ENST00000455996 RSPH10B2B2RC85 870 aa17.9■□□□□ 0.46
TMEM220-202ENST00000455996 CBFA2T2O43439 604 aa17.9■□□□□ 0.46
TMEM220-202ENST00000455996 KIF20AO95235 890 aa17.9■□□□□ 0.46
TMEM220-202ENST00000455996 RSPH10BP0C881 870 aa17.9■□□□□ 0.46
TMEM220-202ENST00000455996 LRRC63Q05C16 580 aa17.9■□□□□ 0.46
TMEM220-202ENST00000455996 RAD51AP2Q09MP3 1159 aa17.9■□□□□ 0.46
TMEM220-202ENST00000455996 MAPK7Q13164 816 aa17.9■□□□□ 0.46
TMEM220-202ENST00000455996 BMT2Q1RMZ1 405 aa17.9■□□□□ 0.46
TMEM220-202ENST00000455996 CELF3Q5SZQ8 465 aaKnown RBP17.9■□□□□ 0.46
TMEM220-202ENST00000455996 SWSAP1Q6NVH7 229 aa17.9■□□□□ 0.46
TMEM220-202ENST00000455996 OTUD6AQ7L8S5 288 aa17.9■□□□□ 0.46
TMEM220-202ENST00000455996 SFR1Q86XK3 245 aa17.9■□□□□ 0.46
TMEM220-202ENST00000455996 FBXO16Q8IX29 292 aaPredicted RBP17.9■□□□□ 0.46
TMEM220-202ENST00000455996 SCFD2Q8WU76 684 aa17.9■□□□□ 0.46
TMEM220-202ENST00000455996 XPO4Q9C0E2 1151 aaKnown RBP17.9■□□□□ 0.46
TMEM220-202ENST00000455996 PARVGQ9HBI0 331 aa17.9■□□□□ 0.46
TMEM220-202ENST00000455996 TRIM49BA6NDI0 452 aa17.89■□□□□ 0.46
TMEM220-202ENST00000455996 FAM13AO94988 1023 aa17.89■□□□□ 0.46
TMEM220-202ENST00000455996 GGPS1O95749 300 aa17.89■□□□□ 0.46
TMEM220-202ENST00000455996 HOXC6P09630 235 aa17.89■□□□□ 0.46
TMEM220-202ENST00000455996 SPAG1Q07617 926 aa17.89■□□□□ 0.46
TMEM220-202ENST00000455996 IRF5Q13568 498 aa17.89■□□□□ 0.46
TMEM220-202ENST00000455996 LY6KQ17RY6 165 aa17.89■□□□□ 0.46
TMEM220-202ENST00000455996 ZCWPW2Q504Y3 356 aa17.89■□□□□ 0.46
TMEM220-202ENST00000455996 XKR3Q5GH77 459 aa17.89■□□□□ 0.46
TMEM220-202ENST00000455996 ANKRD40Q6AI12 368 aa17.89■□□□□ 0.46
TMEM220-202ENST00000455996 TAPT1Q6NXT6 567 aa17.89■□□□□ 0.46
TMEM220-202ENST00000455996 ANO5Q75V66 913 aa17.89■□□□□ 0.46
TMEM220-202ENST00000455996 EEPD1Q7L9B9 569 aa17.89■□□□□ 0.46
TMEM220-202ENST00000455996 IRF2BP1Q8IU81 584 aa17.89■□□□□ 0.46
TMEM220-202ENST00000455996 DAW1Q8N136 415 aa17.89■□□□□ 0.46
TMEM220-202ENST00000455996 GLIS3Q8NEA6 775 aa17.89■□□□□ 0.46
TMEM220-202ENST00000455996 AFAP1L1Q8TED9 768 aa17.89■□□□□ 0.46
TMEM220-202ENST00000455996 SCFD1Q8WVM8 642 aa17.89■□□□□ 0.46
TMEM220-202ENST00000455996 USP6NLQ92738 828 aa17.89■□□□□ 0.46
TMEM220-202ENST00000455996 MAML3Q96JK9 1138 aa17.89■□□□□ 0.46
TMEM220-202ENST00000455996 FGFBP2Q9BYJ0 223 aa17.89■□□□□ 0.46
TMEM220-202ENST00000455996 LIMA1Q9UHB6 759 aaKnown RBP17.89■□□□□ 0.46
TMEM220-202ENST00000455996 BACH1O14867 736 aa17.89■□□□□ 0.45
TMEM220-202ENST00000455996 CA12O43570 354 aa17.89■□□□□ 0.45
TMEM220-202ENST00000455996 SNAI1O95863 264 aaPredicted RBP17.89■□□□□ 0.45
TMEM220-202ENST00000455996 UBASH3AP57075 661 aa17.89■□□□□ 0.45
TMEM220-202ENST00000455996 TTLL4Q14679 1199 aa17.89■□□□□ 0.45
TMEM220-202ENST00000455996 TPD52L1Q16890 204 aaPredicted RBP17.89■□□□□ 0.45
TMEM220-202ENST00000455996 DPP9Q86TI2 863 aa17.89■□□□□ 0.45
TMEM220-202ENST00000455996 SEPT1Q8WYJ6 367 aa17.89■□□□□ 0.45
TMEM220-202ENST00000455996 FIZ1Q96SL8 496 aa17.89■□□□□ 0.45
TMEM220-202ENST00000455996 PCYT2Q99447 389 aa17.89■□□□□ 0.45
TMEM220-202ENST00000455996 ZNF302Q9NR11 478 aa17.89■□□□□ 0.45
TMEM220-202ENST00000455996 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.89■□□□□ 0.45
TMEM220-202ENST00000455996 SLC5A4Q9NY91 659 aa17.89■□□□□ 0.45
TMEM220-202ENST00000455996 PLXNA1Q9UIW2 1896 aa17.88■□□□□ 0.45
TMEM220-202ENST00000455996 A0A1B0GTH6 734 aa17.88■□□□□ 0.45
TMEM220-202ENST00000455996 RASSF10A6NK89 507 aa17.88■□□□□ 0.45
TMEM220-202ENST00000455996 EIF3DO15371 548 aaKnown RBP eCLIP17.88■□□□□ 0.45
TMEM220-202ENST00000455996 HIP1RO75146 1068 aa17.88■□□□□ 0.45
TMEM220-202ENST00000455996 LGR5O75473 907 aa17.88■□□□□ 0.45
TMEM220-202ENST00000455996 SERPINC1P01008 464 aa17.88■□□□□ 0.45
TMEM220-202ENST00000455996 MAPTP10636 758 aaKnown RBP17.88■□□□□ 0.45
TMEM220-202ENST00000455996 CDK11BP21127 795 aaKnown RBP17.88■□□□□ 0.45
TMEM220-202ENST00000455996 PRKCEQ02156 737 aa17.88■□□□□ 0.45
TMEM220-202ENST00000455996 MAP2K5Q13163 448 aa17.88■□□□□ 0.45
TMEM220-202ENST00000455996 CRHR2Q13324 411 aa17.88■□□□□ 0.45
TMEM220-202ENST00000455996 LRRC41Q15345 812 aa17.88■□□□□ 0.45
TMEM220-202ENST00000455996 ZNF507Q8TCN5 953 aa17.88■□□□□ 0.45
TMEM220-202ENST00000455996 TRIM47Q96LD4 638 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms