RNA–Protein interactions for RNA: ENST00000455596.5

HMGB3-205, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene HMGB3, Length 793 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-205ENST00000455596 NEK4P51957 841 aa24.03■■□□□ 1.44
HMGB3-205ENST00000455596 ADGRE1Q14246 886 aa24.03■■□□□ 1.44
HMGB3-205ENST00000455596 MYOCDQ8IZQ8 938 aa24.03■■□□□ 1.44
HMGB3-205ENST00000455596 ATP8B4Q8TF62 1192 aa24.03■■□□□ 1.44
HMGB3-205ENST00000455596 RAD9AQ99638 391 aa24.03■■□□□ 1.44
HMGB3-205ENST00000455596 FAM49AQ9H0Q0 323 aaPredicted RBP24.03■■□□□ 1.44
HMGB3-205ENST00000455596 KCNJ14Q9UNX9 436 aa24.03■■□□□ 1.44
HMGB3-205ENST00000455596 SAMM50Q9Y512 469 aa24.03■■□□□ 1.44
HMGB3-205ENST00000455596 PCDHA10Q9Y5I2 948 aa24.03■■□□□ 1.44
HMGB3-205ENST00000455596 CDY2AQ9Y6F7 541 aa24.03■■□□□ 1.44
HMGB3-205ENST00000455596 M0QZ92 97 aa24.02■■□□□ 1.44
HMGB3-205ENST00000455596 ARHGEF15O94989 841 aa24.02■■□□□ 1.44
HMGB3-205ENST00000455596 GHRP10912 638 aa24.02■■□□□ 1.44
HMGB3-205ENST00000455596 MRPS6P82932 125 aaKnown RBP24.02■■□□□ 1.44
HMGB3-205ENST00000455596 NONOQ15233 471 aaKnown RBP eCLIP24.02■■□□□ 1.44
HMGB3-205ENST00000455596 IER5Q5VY09 327 aa24.02■■□□□ 1.44
HMGB3-205ENST00000455596 FAM117BQ6P1L5 589 aa24.02■■□□□ 1.44
HMGB3-205ENST00000455596 MTHFD1LQ6UB35 978 aa24.02■■□□□ 1.44
HMGB3-205ENST00000455596 KRT25Q7Z3Z0 450 aa24.02■■□□□ 1.44
HMGB3-205ENST00000455596 CKAP2LQ8IYA6 745 aa24.02■■□□□ 1.44
HMGB3-205ENST00000455596 WASF1Q92558 559 aa24.02■■□□□ 1.44
HMGB3-205ENST00000455596 CERS4Q9HA82 394 aa24.02■■□□□ 1.44
HMGB3-205ENST00000455596 ORC3Q9UBD5 711 aaPredicted RBP24.02■■□□□ 1.44
HMGB3-205ENST00000455596 MAFBQ9Y5Q3 323 aaPredicted RBP24.02■■□□□ 1.44
HMGB3-205ENST00000455596 SMIM35A0A1B0GVV1 85 aa24.01■■□□□ 1.43
HMGB3-205ENST00000455596 LCHNA4D1U4 455 aa24.01■■□□□ 1.43
HMGB3-205ENST00000455596 WDR64B1ANS9 1081 aa24.01■■□□□ 1.43
HMGB3-205ENST00000455596 GAS7O60861 476 aa24.01■■□□□ 1.43
HMGB3-205ENST00000455596 CTDNEP1O95476 244 aa24.01■■□□□ 1.43
HMGB3-205ENST00000455596 ME3Q16798 604 aa24.01■■□□□ 1.43
HMGB3-205ENST00000455596 Q4G0T1 1027 aa24.01■■□□□ 1.43
HMGB3-205ENST00000455596 ZNF484Q5JVG2 852 aa24.01■■□□□ 1.43
HMGB3-205ENST00000455596 BBXQ8WY36 941 aaPredicted RBP24.01■■□□□ 1.43
HMGB3-205ENST00000455596 RIT2Q99578 217 aa24.01■■□□□ 1.43
HMGB3-205ENST00000455596 GABBR1Q9UBS5 961 aa24.01■■□□□ 1.43
HMGB3-205ENST00000455596 INSL6Q9Y581 213 aa24.01■■□□□ 1.43
HMGB3-205ENST00000455596 CYP3A7-CYP3A51PA0A087WV96 503 aa24■■□□□ 1.43
HMGB3-205ENST00000455596 LARGE1O95461 756 aa24■■□□□ 1.43
HMGB3-205ENST00000455596 TDP2O95551 362 aa24■■□□□ 1.43
HMGB3-205ENST00000455596 ATP4AP20648 1035 aa24■■□□□ 1.43
HMGB3-205ENST00000455596 CYP3A7P24462 503 aa24■■□□□ 1.43
HMGB3-205ENST00000455596 KLRC1P26715 233 aa24■■□□□ 1.43
HMGB3-205ENST00000455596 LPIN1Q14693 890 aa24■■□□□ 1.43
HMGB3-205ENST00000455596 FBXO47Q5MNV8 452 aa24■■□□□ 1.43
HMGB3-205ENST00000455596 LRCH2Q5VUJ6 765 aa24■■□□□ 1.43
HMGB3-205ENST00000455596 MOXD1Q6UVY6 613 aa24■■□□□ 1.43
HMGB3-205ENST00000455596 NME8Q8N427 588 aa24■■□□□ 1.43
HMGB3-205ENST00000455596 NECAB1Q8N987 351 aa24■■□□□ 1.43
HMGB3-205ENST00000455596 ARNTL2Q8WYA1 636 aa24■■□□□ 1.43
HMGB3-205ENST00000455596 SLC5A5Q92911 643 aa24■■□□□ 1.43
HMGB3-205ENST00000455596 GTF3C6Q969F1 213 aa24■■□□□ 1.43
HMGB3-205ENST00000455596 TEKT3Q9BXF9 490 aa24■■□□□ 1.43
HMGB3-205ENST00000455596 TRPV2Q9Y5S1 764 aa24■■□□□ 1.43
HMGB3-205ENST00000455596 RALGAPA2Q2PPJ7 1873 aa23.99■■□□□ 1.43
HMGB3-205ENST00000455596 CCDC194A0A1B0GVG4 234 aa23.99■■□□□ 1.43
HMGB3-205ENST00000455596 LOC101059915A0A1B0GWI6 518 aaPredicted RBP23.99■■□□□ 1.43
HMGB3-205ENST00000455596 DTNBO60941 627 aa23.99■■□□□ 1.43
HMGB3-205ENST00000455596 INF2Q27J81 1249 aa23.99■■□□□ 1.43
HMGB3-205ENST00000455596 TSHZ1Q6ZSZ6 1077 aa23.99■■□□□ 1.43
HMGB3-205ENST00000455596 USP38Q8NB14 1042 aa23.99■■□□□ 1.43
HMGB3-205ENST00000455596 PPM1EQ8WY54 764 aa23.99■■□□□ 1.43
HMGB3-205ENST00000455596 TOP1MTQ969P6 601 aa23.99■■□□□ 1.43
HMGB3-205ENST00000455596 DISC1Q9NRI5 854 aa23.99■■□□□ 1.43
HMGB3-205ENST00000455596 IGSF9BQ9UPX0 1349 aa23.99■■□□□ 1.43
HMGB3-205ENST00000455596 RFXAPO00287 272 aa23.98■■□□□ 1.43
HMGB3-205ENST00000455596 SFNP31947 248 aa23.98■■□□□ 1.43
HMGB3-205ENST00000455596 TMEM62Q0P6H9 643 aa23.98■■□□□ 1.43
HMGB3-205ENST00000455596 MBOAT7Q96N66 472 aa23.98■■□□□ 1.43
HMGB3-205ENST00000455596 GJB4Q9NTQ9 266 aa23.98■■□□□ 1.43
HMGB3-205ENST00000455596 SQORQ9Y6N5 450 aa23.98■■□□□ 1.43
HMGB3-205ENST00000455596 CHD9Q3L8U1 2897 aa23.97■■□□□ 1.43
HMGB3-205ENST00000455596 EPOPA6NHQ4 379 aa23.97■■□□□ 1.43
HMGB3-205ENST00000455596 CHMP2AO43633 222 aa23.97■■□□□ 1.43
HMGB3-205ENST00000455596 PSMD10O75832 226 aa23.97■■□□□ 1.43
HMGB3-205ENST00000455596 JAK3P52333 1124 aa23.97■■□□□ 1.43
HMGB3-205ENST00000455596 HTRA4P83105 476 aaPredicted RBP23.97■■□□□ 1.43
HMGB3-205ENST00000455596 TRMT1LQ7Z2T5 733 aaKnown RBP23.97■■□□□ 1.43
HMGB3-205ENST00000455596 GJA10Q969M2 543 aa23.97■■□□□ 1.43
HMGB3-205ENST00000455596 FAM167AQ96KS9 214 aa23.97■■□□□ 1.43
HMGB3-205ENST00000455596 CELF4Q9BZC1 486 aaKnown RBP23.97■■□□□ 1.43
HMGB3-205ENST00000455596 UNC45AQ9H3U1 944 aa23.97■■□□□ 1.43
HMGB3-205ENST00000455596 DDX25Q9UHL0 483 aaKnown RBP23.97■■□□□ 1.43
HMGB3-205ENST00000455596 CEP131Q9UPN4 1083 aa23.97■■□□□ 1.43
HMGB3-205ENST00000455596 TTC3P53804 2025 aa23.96■■□□□ 1.43
HMGB3-205ENST00000455596 KDM3AQ9Y4C1 1321 aa23.96■■□□□ 1.43
HMGB3-205ENST00000455596 LINC01553A4QN01 128 aa23.96■■□□□ 1.43
HMGB3-205ENST00000455596 ZBTB42B2RXF5 422 aa23.96■■□□□ 1.43
HMGB3-205ENST00000455596 GTPBP6O43824 516 aaPredicted RBP23.96■■□□□ 1.43
HMGB3-205ENST00000455596 UPP2O95045 317 aa23.96■■□□□ 1.43
HMGB3-205ENST00000455596 FDPSP14324 419 aaKnown RBP23.96■■□□□ 1.43
HMGB3-205ENST00000455596 CCDC85BQ15834 202 aaPredicted RBP23.96■■□□□ 1.43
HMGB3-205ENST00000455596 LETM2Q2VYF4 491 aa23.96■■□□□ 1.43
HMGB3-205ENST00000455596 SPRED2Q7Z698 418 aa23.96■■□□□ 1.43
HMGB3-205ENST00000455596 TGS1Q96RS0 853 aaKnown RBP23.96■■□□□ 1.43
HMGB3-205ENST00000455596 COL4A6Q14031 1691 aa23.95■■□□□ 1.43
HMGB3-205ENST00000455596 POU3F3P20264 500 aaPredicted RBP23.95■■□□□ 1.42
HMGB3-205ENST00000455596 C8orf34Q49A92 452 aa23.95■■□□□ 1.42
HMGB3-205ENST00000455596 NEK8Q86SG6 692 aa23.95■■□□□ 1.42
HMGB3-205ENST00000455596 NSUN7Q8NE18 718 aaKnown RBP23.95■■□□□ 1.42
HMGB3-205ENST00000455596 RDM1Q8NG50 284 aa23.95■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms