RNA–Protein interactions for RNA: ENST00000454612.6

DDR1-240, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene DDR1, Length 3,942 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-240ENST00000454612 SPATA4Q8NEY3 305 aa12.2□□□□□ -0.46
DDR1-240ENST00000454612 DYDC2Q96IM9 177 aa12.2□□□□□ -0.46
DDR1-240ENST00000454612 FAM84AQ96KN4 292 aa12.2□□□□□ -0.46
DDR1-240ENST00000454612 RBM12Q9NTZ6 932 aaKnown RBP12.2□□□□□ -0.46
DDR1-240ENST00000454612 SUFUQ9UMX1 484 aa12.2□□□□□ -0.46
DDR1-240ENST00000454612 USP20Q9Y2K6 914 aa12.2□□□□□ -0.46
DDR1-240ENST00000454612 A0A1B0GUA9 196 aa12.19□□□□□ -0.46
DDR1-240ENST00000454612 OPA1O60313 960 aa12.19□□□□□ -0.46
DDR1-240ENST00000454612 IFNAR2P48551 515 aa12.19□□□□□ -0.46
DDR1-240ENST00000454612 TNNC1P63316 161 aa12.19□□□□□ -0.46
DDR1-240ENST00000454612 GPATCH4Q5T3I0 446 aaKnown RBP12.19□□□□□ -0.46
DDR1-240ENST00000454612 GLYCTKQ8IVS8 523 aa12.19□□□□□ -0.46
DDR1-240ENST00000454612 IFT20Q8IY31 132 aa12.19□□□□□ -0.46
DDR1-240ENST00000454612 H2AFZP0C0S5 128 aa12.19□□□□□ -0.46
DDR1-240ENST00000454612 LMBRD2Q68DH5 695 aaPredicted RBP12.19□□□□□ -0.46
DDR1-240ENST00000454612 MCTP2Q6DN12 878 aa12.19□□□□□ -0.46
DDR1-240ENST00000454612 H2AFVQ71UI9 128 aa12.19□□□□□ -0.46
DDR1-240ENST00000454612 ATP8A1Q9Y2Q0 1164 aa12.19□□□□□ -0.46
DDR1-240ENST00000454612 CAPN7Q9Y6W3 813 aa12.19□□□□□ -0.46
DDR1-240ENST00000454612 KIF4AO95239 1232 aa12.19□□□□□ -0.46
DDR1-240ENST00000454612 CTNNA1P35221 906 aaKnown RBP12.19□□□□□ -0.46
DDR1-240ENST00000454612 GCLMP48507 274 aa12.19□□□□□ -0.46
DDR1-240ENST00000454612 USP14P54578 494 aa12.19□□□□□ -0.46
DDR1-240ENST00000454612 C2CD6Q53TS8 623 aa12.19□□□□□ -0.46
DDR1-240ENST00000454612 BEND6Q5SZJ8 279 aaPredicted RBP12.19□□□□□ -0.46
DDR1-240ENST00000454612 C16orf86Q6ZW13 317 aa12.19□□□□□ -0.46
DDR1-240ENST00000454612 SH3RF1Q7Z6J0 888 aa12.19□□□□□ -0.46
DDR1-240ENST00000454612 FAM186BQ8IYM0 893 aa12.19□□□□□ -0.46
DDR1-240ENST00000454612 ACER1Q8TDN7 264 aa12.19□□□□□ -0.46
DDR1-240ENST00000454612 CCDC114Q96M63 670 aa12.19□□□□□ -0.46
DDR1-240ENST00000454612 ZNF577Q9BSK1 485 aa12.19□□□□□ -0.46
DDR1-240ENST00000454612 KCNK9Q9NPC2 374 aa12.19□□□□□ -0.46
DDR1-240ENST00000454612 ZNF277Q9NRM2 450 aaPredicted RBP12.19□□□□□ -0.46
DDR1-240ENST00000454612 KBTBD4Q9NVX7 518 aa12.19□□□□□ -0.46
DDR1-240ENST00000454612 A0A087X0T9 212 aa12.18□□□□□ -0.46
DDR1-240ENST00000454612 CALUO43852 315 aaPredicted RBP12.18□□□□□ -0.46
DDR1-240ENST00000454612 MED24O75448 989 aa12.18□□□□□ -0.46
DDR1-240ENST00000454612 FAM228BP0C875 321 aa12.18□□□□□ -0.46
DDR1-240ENST00000454612 MYBL2P10244 700 aa12.18□□□□□ -0.46
DDR1-240ENST00000454612 ARHGAP25P42331 645 aa12.18□□□□□ -0.46
DDR1-240ENST00000454612 MAGEA9P43362 315 aa12.18□□□□□ -0.46
DDR1-240ENST00000454612 CARSP49589 748 aaKnown RBP12.18□□□□□ -0.46
DDR1-240ENST00000454612 PPP1R18Q6NYC8 613 aa12.18□□□□□ -0.46
DDR1-240ENST00000454612 CPLX4Q7Z7G2 160 aa12.18□□□□□ -0.46
DDR1-240ENST00000454612 SH3GLB2Q9NR46 395 aa12.18□□□□□ -0.46
DDR1-240ENST00000454612 PI4KBQ9UBF8 816 aa12.18□□□□□ -0.46
DDR1-240ENST00000454612 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.18□□□□□ -0.46
DDR1-240ENST00000454612 TMEM150BA6NC51 233 aa12.18□□□□□ -0.46
DDR1-240ENST00000454612 LAD1O00515 517 aa12.18□□□□□ -0.46
DDR1-240ENST00000454612 FLOT1O75955 427 aa12.18□□□□□ -0.46
DDR1-240ENST00000454612 DHX9Q08211 1270 aaKnown RBP12.18□□□□□ -0.46
DDR1-240ENST00000454612 ECM1Q16610 540 aa12.18□□□□□ -0.46
DDR1-240ENST00000454612 NT5DC1Q5TFE4 455 aa12.18□□□□□ -0.46
DDR1-240ENST00000454612 WDR59Q6PJI9 974 aa12.18□□□□□ -0.46
DDR1-240ENST00000454612 MIER3Q7Z3K6 550 aa12.18□□□□□ -0.46
DDR1-240ENST00000454612 SRLQ86TD4 932 aa12.18□□□□□ -0.46
DDR1-240ENST00000454612 CAMKK2Q96RR4 588 aa12.18□□□□□ -0.46
DDR1-240ENST00000454612 ARHGEF10LQ9HCE6 1279 aa12.18□□□□□ -0.46
DDR1-240ENST00000454612 MLXIPLQ9NP71 852 aa12.18□□□□□ -0.46
DDR1-240ENST00000454612 CCPG1Q9ULG6 757 aa12.18□□□□□ -0.46
DDR1-240ENST00000454612 FZD1Q9UP38 647 aa12.18□□□□□ -0.46
DDR1-240ENST00000454612 COL1A1P02452 1464 aaPredicted RBP12.18□□□□□ -0.46
DDR1-240ENST00000454612 ANKRD62A6NC57 917 aa12.18□□□□□ -0.46
DDR1-240ENST00000454612 TCP1P17987 556 aaKnown RBP12.18□□□□□ -0.46
DDR1-240ENST00000454612 ALDH1B1P30837 517 aa12.18□□□□□ -0.46
DDR1-240ENST00000454612 PLTPP55058 493 aa12.18□□□□□ -0.46
DDR1-240ENST00000454612 MTM1Q13496 603 aa12.18□□□□□ -0.46
DDR1-240ENST00000454612 TTLL12Q14166 644 aaPredicted RBP12.18□□□□□ -0.46
DDR1-240ENST00000454612 EPC2Q52LR7 807 aa12.18□□□□□ -0.46
DDR1-240ENST00000454612 XKR9Q5GH70 373 aa12.18□□□□□ -0.46
DDR1-240ENST00000454612 MUM1L1Q5H9M0 696 aa12.18□□□□□ -0.46
DDR1-240ENST00000454612 SYDE2Q5VT97 1194 aa12.18□□□□□ -0.46
DDR1-240ENST00000454612 PPP1R16BQ96T49 567 aa12.18□□□□□ -0.46
DDR1-240ENST00000454612 TMOD4Q9NZQ9 345 aa12.18□□□□□ -0.46
DDR1-240ENST00000454612 REXO2Q9Y3B8 237 aaKnown RBP12.18□□□□□ -0.46
DDR1-240ENST00000454612 DDX60Q8IY21 1712 aaKnown RBP12.18□□□□□ -0.46
DDR1-240ENST00000454612 ABCB11O95342 1321 aa12.18□□□□□ -0.46
DDR1-240ENST00000454612 GPR75-ASB3A0A0A6YYF3 556 aa12.18□□□□□ -0.46
DDR1-240ENST00000454612 NDUFB10O96000 172 aa12.18□□□□□ -0.46
DDR1-240ENST00000454612 GUCY2CP25092 1073 aa12.18□□□□□ -0.46
DDR1-240ENST00000454612 RCAN1P53805 252 aa12.18□□□□□ -0.46
DDR1-240ENST00000454612 PNMA5Q96PV4 448 aa12.18□□□□□ -0.46
DDR1-240ENST00000454612 REEP2Q9BRK0 252 aa12.18□□□□□ -0.46
DDR1-240ENST00000454612 SPZ1Q9BXG8 430 aa12.18□□□□□ -0.46
DDR1-240ENST00000454612 CAPS2Q9BXY5 557 aa12.18□□□□□ -0.46
DDR1-240ENST00000454612 UBE2TQ9NPD8 197 aaPredicted RBP12.18□□□□□ -0.46
DDR1-240ENST00000454612 STK17AQ9UEE5 414 aa12.18□□□□□ -0.46
DDR1-240ENST00000454612 ZBTB7AO95365 584 aa12.17□□□□□ -0.46
DDR1-240ENST00000454612 AFPP02771 609 aaKnown RBP12.17□□□□□ -0.46
DDR1-240ENST00000454612 PPP1R7Q15435 360 aa12.17□□□□□ -0.46
DDR1-240ENST00000454612 AKT1S1Q96B36 256 aa12.17□□□□□ -0.46
DDR1-240ENST00000454612 MTMR8Q96EF0 704 aa12.17□□□□□ -0.46
DDR1-240ENST00000454612 BLOC1S4Q9NUP1 217 aa12.17□□□□□ -0.46
DDR1-240ENST00000454612 AMACRQ9UHK6 382 aa12.17□□□□□ -0.46
DDR1-240ENST00000454612 MYH3P11055 1940 aa12.17□□□□□ -0.46
DDR1-240ENST00000454612 GCOM1H8Y6P7 765 aaPredicted RBP12.17□□□□□ -0.46
DDR1-240ENST00000454612 ECE2O60344 883 aa12.17□□□□□ -0.46
DDR1-240ENST00000454612 POLR2MP0CAP2 368 aa12.17□□□□□ -0.46
DDR1-240ENST00000454612 TRADDQ15628 312 aa12.17□□□□□ -0.46
DDR1-240ENST00000454612 CCDC105Q8IYK2 499 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms