RNA–Protein interactions for RNA: ENST00000454402.6

RFC5-204, Transcript of replication factor C subunit 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFC5, Length 1,655 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5-204ENST00000454402 TMEM199Q8N511 208 aa17.58■□□□□ 0.41
RFC5-204ENST00000454402 ATP8B4Q8TF62 1192 aa17.58■□□□□ 0.41
RFC5-204ENST00000454402 MTMR6Q9Y217 621 aa17.58■□□□□ 0.41
RFC5-204ENST00000454402 IGSF9BQ9UPX0 1349 aa17.58■□□□□ 0.4
RFC5-204ENST00000454402 HBP1O60381 514 aa17.58■□□□□ 0.4
RFC5-204ENST00000454402 OATP04181 439 aa17.58■□□□□ 0.4
RFC5-204ENST00000454402 SLC26A2P50443 739 aa17.58■□□□□ 0.4
RFC5-204ENST00000454402 EPHB4P54760 987 aa17.58■□□□□ 0.4
RFC5-204ENST00000454402 B3GNT9Q6UX72 402 aa17.58■□□□□ 0.4
RFC5-204ENST00000454402 TPH2Q8IWU9 490 aa17.58■□□□□ 0.4
RFC5-204ENST00000454402 CCDC155Q8N6L0 562 aa17.58■□□□□ 0.4
RFC5-204ENST00000454402 GDF15Q99988 308 aa17.58■□□□□ 0.4
RFC5-204ENST00000454402 LTBP2Q14767 1821 aa17.57■□□□□ 0.4
RFC5-204ENST00000454402 A0A087WWV3 80 aa17.57■□□□□ 0.4
RFC5-204ENST00000454402 DDX11L8A8MPP1 907 aa17.57■□□□□ 0.4
RFC5-204ENST00000454402 CKBP12277 381 aa17.57■□□□□ 0.4
RFC5-204ENST00000454402 CEBPZQ03701 1054 aaKnown RBP17.57■□□□□ 0.4
RFC5-204ENST00000454402 SPIRE1Q08AE8 756 aa17.57■□□□□ 0.4
RFC5-204ENST00000454402 TMEM62Q0P6H9 643 aa17.57■□□□□ 0.4
RFC5-204ENST00000454402 MTERF2Q49AM1 385 aa17.57■□□□□ 0.4
RFC5-204ENST00000454402 MARCH8Q5T0T0 291 aa17.57■□□□□ 0.4
RFC5-204ENST00000454402 ZNF618Q5T7W0 954 aa17.57■□□□□ 0.4
RFC5-204ENST00000454402 PLA2G4FQ68DD2 849 aa17.57■□□□□ 0.4
RFC5-204ENST00000454402 SERINC5Q86VE9 423 aa17.57■□□□□ 0.4
RFC5-204ENST00000454402 RDM1Q8NG50 284 aa17.57■□□□□ 0.4
RFC5-204ENST00000454402 TNPO1Q92973 898 aaKnown RBP17.57■□□□□ 0.4
RFC5-204ENST00000454402 RRN3P2A6NIE6 340 aa17.56■□□□□ 0.4
RFC5-204ENST00000454402 KLRC1P26715 233 aa17.56■□□□□ 0.4
RFC5-204ENST00000454402 RESTQ13127 1097 aa17.56■□□□□ 0.4
RFC5-204ENST00000454402 BECN1Q14457 450 aa17.56■□□□□ 0.4
RFC5-204ENST00000454402 EPHA7Q15375 998 aa17.56■□□□□ 0.4
RFC5-204ENST00000454402 TMEM266Q2M3C6 531 aa17.56■□□□□ 0.4
RFC5-204ENST00000454402 BRAPQ7Z569 592 aa17.56■□□□□ 0.4
RFC5-204ENST00000454402 METTL13Q8N6R0 699 aa17.56■□□□□ 0.4
RFC5-204ENST00000454402 DNAJB3Q8WWF6 145 aa17.56■□□□□ 0.4
RFC5-204ENST00000454402 BBXQ8WY36 941 aaPredicted RBP17.56■□□□□ 0.4
RFC5-204ENST00000454402 PPP1R16BQ96T49 567 aa17.56■□□□□ 0.4
RFC5-204ENST00000454402 EIF2AK1Q9BQI3 630 aaKnown RBP17.56■□□□□ 0.4
RFC5-204ENST00000454402 LXNQ9BS40 222 aa17.56■□□□□ 0.4
RFC5-204ENST00000454402 FTOQ9C0B1 505 aaKnown RBP eCLIP17.56■□□□□ 0.4
RFC5-204ENST00000454402 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.56■□□□□ 0.4
RFC5-204ENST00000454402 NRBP2Q9NSY0 501 aa17.56■□□□□ 0.4
RFC5-204ENST00000454402 BMP2KQ9NSY1 1161 aaPredicted RBP17.56■□□□□ 0.4
RFC5-204ENST00000454402 WRAP73Q9P2S5 460 aaPredicted RBP17.56■□□□□ 0.4
RFC5-204ENST00000454402 P4HBP07237 508 aaKnown RBP17.55■□□□□ 0.4
RFC5-204ENST00000454402 HOXC8P31273 242 aa17.55■□□□□ 0.4
RFC5-204ENST00000454402 QARSP47897 775 aaKnown RBP17.55■□□□□ 0.4
RFC5-204ENST00000454402 PSMC5P62195 406 aa17.55■□□□□ 0.4
RFC5-204ENST00000454402 LRRC8DQ7L1W4 858 aa17.55■□□□□ 0.4
RFC5-204ENST00000454402 C4orf32Q8N8J7 132 aa17.55■□□□□ 0.4
RFC5-204ENST00000454402 CAGE1Q8TC20 777 aa17.55■□□□□ 0.4
RFC5-204ENST00000454402 FAM167AQ96KS9 214 aa17.55■□□□□ 0.4
RFC5-204ENST00000454402 IQCF3P0C7M6 154 aa17.55■□□□□ 0.4
RFC5-204ENST00000454402 SELPP16109 830 aa17.55■□□□□ 0.4
RFC5-204ENST00000454402 ADAM17P78536 824 aa17.55■□□□□ 0.4
RFC5-204ENST00000454402 ORC2Q13416 577 aaPredicted RBP17.55■□□□□ 0.4
RFC5-204ENST00000454402 PPIGQ13427 754 aaKnown RBP eCLIP17.55■□□□□ 0.43e-8■■■■■ 37.3
RFC5-204ENST00000454402 PKP1Q13835 747 aa17.55■□□□□ 0.4
RFC5-204ENST00000454402 TRIM71Q2Q1W2 868 aaKnown RBP17.55■□□□□ 0.4
RFC5-204ENST00000454402 ZNF484Q5JVG2 852 aa17.55■□□□□ 0.4
RFC5-204ENST00000454402 C9orf50Q5SZB4 431 aa17.55■□□□□ 0.4
RFC5-204ENST00000454402 MTHFD1LQ6UB35 978 aa17.55■□□□□ 0.4
RFC5-204ENST00000454402 DAXXQ9UER7 740 aaPredicted RBP17.55■□□□□ 0.4
RFC5-204ENST00000454402 TRIP12Q14669 1992 aaPredicted RBP17.54■□□□□ 0.4
RFC5-204ENST00000454402 ZBTB42B2RXF5 422 aa17.54■□□□□ 0.4
RFC5-204ENST00000454402 PITPNM1O00562 1244 aa17.54■□□□□ 0.4
RFC5-204ENST00000454402 ZBTB39O15060 712 aa17.54■□□□□ 0.4
RFC5-204ENST00000454402 ZRSR1Q15695 479 aaKnown RBP17.54■□□□□ 0.4
RFC5-204ENST00000454402 LRRC71Q8N4P6 559 aa17.54■□□□□ 0.4
RFC5-204ENST00000454402 GINS2Q9Y248 185 aa17.54■□□□□ 0.4
RFC5-204ENST00000454402 PP2D1A8MPX8 630 aa17.53■□□□□ 0.4
RFC5-204ENST00000454402 RSPH10B2B2RC85 870 aa17.53■□□□□ 0.4
RFC5-204ENST00000454402 RSPH10BP0C881 870 aa17.53■□□□□ 0.4
RFC5-204ENST00000454402 CLCN3P51790 818 aa17.53■□□□□ 0.4
RFC5-204ENST00000454402 NPEPPSP55786 919 aa17.53■□□□□ 0.4
RFC5-204ENST00000454402 SF3A1Q15459 793 aaKnown RBP17.53■□□□□ 0.4
RFC5-204ENST00000454402 SHHQ15465 462 aa17.53■□□□□ 0.4
RFC5-204ENST00000454402 XKR3Q5GH77 459 aa17.53■□□□□ 0.4
RFC5-204ENST00000454402 DTHD1Q6ZMT9 781 aa17.53■□□□□ 0.4
RFC5-204ENST00000454402 OTOP2Q7RTS6 562 aa17.53■□□□□ 0.4
RFC5-204ENST00000454402 SUGCTQ9HAC7 445 aa17.53■□□□□ 0.4
RFC5-204ENST00000454402 LRWD1Q9UFC0 647 aa17.53■□□□□ 0.4
RFC5-204ENST00000454402 CLIC4Q9Y696 253 aa17.53■□□□□ 0.4
RFC5-204ENST00000454402 CEP290O15078 2479 aa17.53■□□□□ 0.4
RFC5-204ENST00000454402 VWA3AA6NCI4 1184 aa17.52■□□□□ 0.4
RFC5-204ENST00000454402 SLITRK3O94933 977 aa17.52■□□□□ 0.4
RFC5-204ENST00000454402 CDC25AP30304 524 aa17.52■□□□□ 0.4
RFC5-204ENST00000454402 IL17AQ16552 155 aa17.52■□□□□ 0.4
RFC5-204ENST00000454402 ZNF365Q70YC5 407 aa17.52■□□□□ 0.4
RFC5-204ENST00000454402 ANO5Q75V66 913 aa17.52■□□□□ 0.4
RFC5-204ENST00000454402 RSPH3Q86UC2 560 aa17.52■□□□□ 0.4
RFC5-204ENST00000454402 ZNF579Q8NAF0 562 aaKnown RBP17.52■□□□□ 0.4
RFC5-204ENST00000454402 ZNF668Q96K58 619 aaPredicted RBP17.52■□□□□ 0.4
RFC5-204ENST00000454402 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.52■□□□□ 0.43e-11■■□□□ 12.8
RFC5-204ENST00000454402 ZSWIM4Q9H7M6 989 aa17.52■□□□□ 0.4
RFC5-204ENST00000454402 IL23AQ9NPF7 189 aa17.52■□□□□ 0.4
RFC5-204ENST00000454402 CEP131Q9UPN4 1083 aa17.52■□□□□ 0.4
RFC5-204ENST00000454402 MBLAC1A4D2B0 266 aaPredicted RBP17.52■□□□□ 0.39
RFC5-204ENST00000454402 ZBBXA8MT70 800 aa17.52■□□□□ 0.39
RFC5-204ENST00000454402 MED24O75448 989 aa17.52■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms