RNA–Protein interactions for RNA: ENST00000453854.1

HMGB1P15-201, Transcript of high mobility group box 1 pseudogene 15, humanhuman

BASIC

Gene HMGB1P15, Length 435 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P15-201ENST00000453854 CILP2Q8IUL8 1156 aa4.98□□□□□ -1.61
HMGB1P15-201ENST00000453854 RBM12BQ8IXT5 1001 aaKnown RBP4.98□□□□□ -1.61
HMGB1P15-201ENST00000453854 CMIPQ8IY22 773 aa4.98□□□□□ -1.61
HMGB1P15-201ENST00000453854 CLEC4DQ8WXI8 215 aa4.98□□□□□ -1.61
HMGB1P15-201ENST00000453854 PCGF6Q9BYE7 350 aa4.98□□□□□ -1.61
HMGB1P15-201ENST00000453854 C19orf44Q9H6X5 657 aa4.98□□□□□ -1.61
HMGB1P15-201ENST00000453854 USP36Q9P275 1121 aaKnown RBP4.98□□□□□ -1.61
HMGB1P15-201ENST00000453854 ZNF180Q9UJW8 692 aa4.98□□□□□ -1.61
HMGB1P15-201ENST00000453854 NOC2LQ9Y3T9 749 aaKnown RBP4.98□□□□□ -1.61
HMGB1P15-201ENST00000453854 WASHC2AQ641Q2 1341 aa4.97□□□□□ -1.61
HMGB1P15-201ENST00000453854 RASSF10A6NK89 507 aa4.97□□□□□ -1.61
HMGB1P15-201ENST00000453854 ACOT7O00154 380 aa4.97□□□□□ -1.61
HMGB1P15-201ENST00000453854 PRC1O43663 620 aa4.97□□□□□ -1.61
HMGB1P15-201ENST00000453854 PCDHGA12O60330 932 aa4.97□□□□□ -1.61
HMGB1P15-201ENST00000453854 LTFP02788 710 aa4.97□□□□□ -1.61
HMGB1P15-201ENST00000453854 CYBBP04839 570 aa4.97□□□□□ -1.61
HMGB1P15-201ENST00000453854 DBHP09172 617 aa4.97□□□□□ -1.61
HMGB1P15-201ENST00000453854 MYBL2P10244 700 aa4.97□□□□□ -1.61
HMGB1P15-201ENST00000453854 RECQLP46063 649 aaPredicted RBP4.97□□□□□ -1.61
HMGB1P15-201ENST00000453854 ERVFRD-1P60508 538 aa4.97□□□□□ -1.61
HMGB1P15-201ENST00000453854 PCBP2Q15366 365 aaKnown RBP eCLIP4.97□□□□□ -1.61
HMGB1P15-201ENST00000453854 MLANAQ16655 118 aa4.97□□□□□ -1.61
HMGB1P15-201ENST00000453854 BICRALQ6AI39 1079 aa4.97□□□□□ -1.61
HMGB1P15-201ENST00000453854 PAQR3Q6TCH7 311 aa4.97□□□□□ -1.61
HMGB1P15-201ENST00000453854 WDR75Q8IWA0 830 aaKnown RBP4.97□□□□□ -1.61
HMGB1P15-201ENST00000453854 MYO1HQ8N1T3 1032 aa4.97□□□□□ -1.61
HMGB1P15-201ENST00000453854 TTC8Q8TAM2 541 aa4.97□□□□□ -1.61
HMGB1P15-201ENST00000453854 PEX11GQ96HA9 241 aa4.97□□□□□ -1.61
HMGB1P15-201ENST00000453854 ZNF496Q96IT1 587 aaPredicted RBP4.97□□□□□ -1.61
HMGB1P15-201ENST00000453854 AP5M1Q9H0R1 490 aa4.97□□□□□ -1.61
HMGB1P15-201ENST00000453854 MS4A5Q9H3V2 200 aa4.97□□□□□ -1.61
HMGB1P15-201ENST00000453854 LUC7LQ9NQ29 371 aaKnown RBP4.97□□□□□ -1.61
HMGB1P15-201ENST00000453854 HSPBP1Q9NZL4 362 aa4.97□□□□□ -1.61
HMGB1P15-201ENST00000453854 GABBR1Q9UBS5 961 aa4.97□□□□□ -1.61
HMGB1P15-201ENST00000453854 PALD1Q9ULE6 856 aa4.97□□□□□ -1.61
HMGB1P15-201ENST00000453854 PCDHB4Q9Y5E5 795 aa4.97□□□□□ -1.61
HMGB1P15-201ENST00000453854 PCDHGA9Q9Y5G4 932 aaKnown RBP4.97□□□□□ -1.61
HMGB1P15-201ENST00000453854 PCDHGA8Q9Y5G5 932 aa4.97□□□□□ -1.61
HMGB1P15-201ENST00000453854 PCDHGA7Q9Y5G6 932 aa4.97□□□□□ -1.61
HMGB1P15-201ENST00000453854 PCDHGA6Q9Y5G7 932 aa4.97□□□□□ -1.61
HMGB1P15-201ENST00000453854 PCDHGA3Q9Y5H0 932 aa4.97□□□□□ -1.61
HMGB1P15-201ENST00000453854 PCDHGA2Q9Y5H1 932 aa4.97□□□□□ -1.61
HMGB1P15-201ENST00000453854 A0A1W2PQJ5 194 aa4.96□□□□□ -1.62
HMGB1P15-201ENST00000453854 MT-CO1P00395 513 aa4.96□□□□□ -1.62
HMGB1P15-201ENST00000453854 TRHRP34981 398 aaPredicted RBP4.96□□□□□ -1.62
HMGB1P15-201ENST00000453854 GNALP38405 381 aa4.96□□□□□ -1.62
HMGB1P15-201ENST00000453854 ARL4AP40617 200 aa4.96□□□□□ -1.62
HMGB1P15-201ENST00000453854 SCAND1P57086 179 aa4.96□□□□□ -1.62
HMGB1P15-201ENST00000453854 ADCY1Q08828 1119 aa4.96□□□□□ -1.62
HMGB1P15-201ENST00000453854 ODF1Q14990 250 aa4.96□□□□□ -1.62
HMGB1P15-201ENST00000453854 TMEM132BQ14DG7 1078 aa4.96□□□□□ -1.62
HMGB1P15-201ENST00000453854 BTBD8Q5XKL5 378 aa4.96□□□□□ -1.62
HMGB1P15-201ENST00000453854 MILR1Q7Z6M3 343 aa4.96□□□□□ -1.62
HMGB1P15-201ENST00000453854 NME9Q86XW9 330 aa4.96□□□□□ -1.62
HMGB1P15-201ENST00000453854 CPA6Q8N4T0 437 aa4.96□□□□□ -1.62
HMGB1P15-201ENST00000453854 MAGEB6Q8N7X4 407 aa4.96□□□□□ -1.62
HMGB1P15-201ENST00000453854 JPH3Q8WXH2 748 aaPredicted RBP4.96□□□□□ -1.62
HMGB1P15-201ENST00000453854 MYLIPQ8WY64 445 aa4.96□□□□□ -1.62
HMGB1P15-201ENST00000453854 FOXRED1Q96CU9 486 aaPredicted RBP4.96□□□□□ -1.62
HMGB1P15-201ENST00000453854 CCDC136Q96JN2 1154 aa4.96□□□□□ -1.62
HMGB1P15-201ENST00000453854 ACAP3Q96P50 834 aa4.96□□□□□ -1.62
HMGB1P15-201ENST00000453854 NUDT5Q9UKK9 219 aa4.96□□□□□ -1.62
HMGB1P15-201ENST00000453854 PNMA8BQ9ULN7 279 aaPredicted RBP4.96□□□□□ -1.62
HMGB1P15-201ENST00000453854 ANKRD6Q9Y2G4 727 aa4.96□□□□□ -1.62
HMGB1P15-201ENST00000453854 LUC7L2Q9Y383 392 aaKnown RBP4.96□□□□□ -1.62
HMGB1P15-201ENST00000453854 SIT1Q9Y3P8 196 aa4.96□□□□□ -1.62
HMGB1P15-201ENST00000453854 LCHNA4D1U4 455 aa4.95□□□□□ -1.62
HMGB1P15-201ENST00000453854 GOLGA8AA7E2F4 631 aa4.95□□□□□ -1.62
HMGB1P15-201ENST00000453854 GOLGA8BA8MQT2 603 aa4.95□□□□□ -1.62
HMGB1P15-201ENST00000453854 FOXP2O15409 715 aa4.95□□□□□ -1.62
HMGB1P15-201ENST00000453854 PRPF3O43395 683 aaKnown RBP4.95□□□□□ -1.62
HMGB1P15-201ENST00000453854 TPD52L2O43399 206 aaKnown RBP4.95□□□□□ -1.62
HMGB1P15-201ENST00000453854 KDM1AO60341 852 aa4.95□□□□□ -1.62
HMGB1P15-201ENST00000453854 H2AFYO75367 372 aaKnown RBP4.95□□□□□ -1.62
HMGB1P15-201ENST00000453854 SNUPNO95149 360 aaKnown RBP4.95□□□□□ -1.62
HMGB1P15-201ENST00000453854 ZBTB7AO95365 584 aa4.95□□□□□ -1.62
HMGB1P15-201ENST00000453854 HLTFQ14527 1009 aaKnown RBP eCLIP4.95□□□□□ -1.62
HMGB1P15-201ENST00000453854 GORABQ5T7V8 394 aa4.95□□□□□ -1.62
HMGB1P15-201ENST00000453854 CCSAPQ6IQ19 270 aaPredicted RBP4.95□□□□□ -1.62
HMGB1P15-201ENST00000453854 CXorf57Q6NSI4 855 aaKnown RBP4.95□□□□□ -1.62
HMGB1P15-201ENST00000453854 PGM2L1Q6PCE3 622 aa4.95□□□□□ -1.62
HMGB1P15-201ENST00000453854 PRR23BQ6ZRT6 265 aa4.95□□□□□ -1.62
HMGB1P15-201ENST00000453854 C14orf80Q86SX3 495 aa4.95□□□□□ -1.62
HMGB1P15-201ENST00000453854 RTN4RL1Q86UN2 441 aaPredicted RBP4.95□□□□□ -1.62
HMGB1P15-201ENST00000453854 TICAM2Q86XR7 235 aa4.95□□□□□ -1.62
HMGB1P15-201ENST00000453854 CMTR2Q8IYT2 770 aaKnown RBP4.95□□□□□ -1.62
HMGB1P15-201ENST00000453854 ARRDC4Q8NCT1 418 aa4.95□□□□□ -1.62
HMGB1P15-201ENST00000453854 ASB15Q8WXK1 588 aa4.95□□□□□ -1.62
HMGB1P15-201ENST00000453854 SSH1Q8WYL5 1049 aa4.95□□□□□ -1.62
HMGB1P15-201ENST00000453854 RTF1Q92541 710 aaKnown RBP4.95□□□□□ -1.62
HMGB1P15-201ENST00000453854 TSPAN17Q96FV3 270 aa4.95□□□□□ -1.62
HMGB1P15-201ENST00000453854 NUP88Q99567 741 aaPredicted RBP4.95□□□□□ -1.62
HMGB1P15-201ENST00000453854 KCNK12Q9HB15 430 aa4.95□□□□□ -1.62
HMGB1P15-201ENST00000453854 RIC8BQ9NVN3 520 aa4.95□□□□□ -1.62
HMGB1P15-201ENST00000453854 IP6K2Q9UHH9 426 aa4.95□□□□□ -1.62
HMGB1P15-201ENST00000453854 GPR160Q9UJ42 338 aa4.95□□□□□ -1.62
HMGB1P15-201ENST00000453854 GIT1Q9Y2X7 761 aa4.95□□□□□ -1.62
HMGB1P15-201ENST00000453854 ZC3H12DA2A288 527 aaKnown RBP4.94□□□□□ -1.62
HMGB1P15-201ENST00000453854 GOLGA6L22H0YM25 854 aa4.94□□□□□ -1.62
HMGB1P15-201ENST00000453854 MAP4K4O95819 1239 aaPredicted RBP4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms