RNA–Protein interactions for RNA: ENST00000453689.5

VPS16-205, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS16, Length 966 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-205ENST00000453689 FGBP02675 491 aa16.52■□□□□ 0.24
VPS16-205ENST00000453689 PFKMP08237 780 aa16.52■□□□□ 0.24
VPS16-205ENST00000453689 ATP4AP20648 1035 aa16.52■□□□□ 0.24
VPS16-205ENST00000453689 THPOP40225 353 aa16.52■□□□□ 0.24
VPS16-205ENST00000453689 IGBP1P78318 339 aa16.52■□□□□ 0.24
VPS16-205ENST00000453689 GPNMBQ14956 572 aa16.52■□□□□ 0.24
VPS16-205ENST00000453689 RASIP1Q5U651 963 aa16.52■□□□□ 0.24
VPS16-205ENST00000453689 TRAF7Q6Q0C0 670 aa16.52■□□□□ 0.24
VPS16-205ENST00000453689 B3GNT9Q6UX72 402 aa16.52■□□□□ 0.24
VPS16-205ENST00000453689 OTOP2Q7RTS6 562 aa16.52■□□□□ 0.24
VPS16-205ENST00000453689 POTEDQ86YR6 584 aa16.52■□□□□ 0.24
VPS16-205ENST00000453689 HERVK_113Q902F9 699 aa16.52■□□□□ 0.24
VPS16-205ENST00000453689 TNPO1Q92973 898 aaKnown RBP16.52■□□□□ 0.24
VPS16-205ENST00000453689 FAM20AQ96MK3 541 aa16.52■□□□□ 0.24
VPS16-205ENST00000453689 DISC1Q9NRI5 854 aa16.52■□□□□ 0.24
VPS16-205ENST00000453689 GABBR1Q9UBS5 961 aa16.52■□□□□ 0.24
VPS16-205ENST00000453689 TUBE1Q9UJT0 475 aa16.52■□□□□ 0.24
VPS16-205ENST00000453689 MAFBQ9Y5Q3 323 aaPredicted RBP16.52■□□□□ 0.24
VPS16-205ENST00000453689 RRN3P2A6NIE6 340 aa16.51■□□□□ 0.23
VPS16-205ENST00000453689 WNT7AO00755 349 aa16.51■□□□□ 0.23
VPS16-205ENST00000453689 HBP1O60381 514 aa16.51■□□□□ 0.23
VPS16-205ENST00000453689 NBNO60934 754 aa16.51■□□□□ 0.23
VPS16-205ENST00000453689 PARNO95453 639 aaKnown RBP16.51■□□□□ 0.23
VPS16-205ENST00000453689 SFNP31947 248 aa16.51■□□□□ 0.23
VPS16-205ENST00000453689 JAK3P52333 1124 aa16.51■□□□□ 0.23
VPS16-205ENST00000453689 RUFY4Q6ZNE9 571 aa16.51■□□□□ 0.23
VPS16-205ENST00000453689 MIER3Q7Z3K6 550 aa16.51■□□□□ 0.23
VPS16-205ENST00000453689 BRAPQ7Z569 592 aa16.51■□□□□ 0.23
VPS16-205ENST00000453689 RDM1Q8NG50 284 aa16.51■□□□□ 0.23
VPS16-205ENST00000453689 ATP8B4Q8TF62 1192 aa16.51■□□□□ 0.23
VPS16-205ENST00000453689 TRAPPC12Q8WVT3 735 aa16.51■□□□□ 0.23
VPS16-205ENST00000453689 HAS1Q92839 578 aa16.51■□□□□ 0.23
VPS16-205ENST00000453689 ZBTB10Q96DT7 871 aa16.51■□□□□ 0.23
VPS16-205ENST00000453689 IPO9Q96P70 1041 aaKnown RBP16.51■□□□□ 0.23
VPS16-205ENST00000453689 LAMA2P24043 3122 aaKnown RBP16.5■□□□□ 0.23
VPS16-205ENST00000453689 RBAK-RBAKDNI3L0D1 243 aa16.5■□□□□ 0.23
VPS16-205ENST00000453689 TBX3O15119 743 aa16.5■□□□□ 0.23
VPS16-205ENST00000453689 CAND2O75155 1236 aa16.5■□□□□ 0.23
VPS16-205ENST00000453689 DDIT3P35638 169 aa16.5■□□□□ 0.23
VPS16-205ENST00000453689 RESTQ13127 1097 aa16.5■□□□□ 0.23
VPS16-205ENST00000453689 MBTPS1Q14703 1052 aa16.5■□□□□ 0.23
VPS16-205ENST00000453689 UGCGQ16739 394 aa16.5■□□□□ 0.23
VPS16-205ENST00000453689 CKAP2LQ8IYA6 745 aa16.5■□□□□ 0.23
VPS16-205ENST00000453689 FTOQ9C0B1 505 aaKnown RBP eCLIP16.5■□□□□ 0.23
VPS16-205ENST00000453689 MTIF3Q9H2K0 278 aaKnown RBP16.5■□□□□ 0.23
VPS16-205ENST00000453689 CXXC1Q9P0U4 656 aaPredicted RBP16.5■□□□□ 0.23
VPS16-205ENST00000453689 VAV3Q9UKW4 847 aa16.5■□□□□ 0.23
VPS16-205ENST00000453689 NOL7Q9UMY1 257 aaKnown RBP16.5■□□□□ 0.23
VPS16-205ENST00000453689 COL1A2P08123 1366 aa16.5■□□□□ 0.23
VPS16-205ENST00000453689 MYH15Q9Y2K3 1946 aa16.49■□□□□ 0.23
VPS16-205ENST00000453689 RSPH10B2B2RC85 870 aa16.49■□□□□ 0.23
VPS16-205ENST00000453689 ZBTB42B2RXF5 422 aa16.49■□□□□ 0.23
VPS16-205ENST00000453689 ZNF862O60290 1169 aa16.49■□□□□ 0.23
VPS16-205ENST00000453689 CXCL10P02778 98 aa16.49■□□□□ 0.23
VPS16-205ENST00000453689 CTSHP09668 335 aa16.49■□□□□ 0.23
VPS16-205ENST00000453689 RSPH10BP0C881 870 aa16.49■□□□□ 0.23
VPS16-205ENST00000453689 ZSCAN22P10073 491 aaPredicted RBP16.49■□□□□ 0.23
VPS16-205ENST00000453689 TRAPPC10P48553 1259 aa16.49■□□□□ 0.23
VPS16-205ENST00000453689 PPP2R5CQ13362 524 aa16.49■□□□□ 0.23
VPS16-205ENST00000453689 PKP1Q13835 747 aa16.49■□□□□ 0.23
VPS16-205ENST00000453689 TAF2Q6P1X5 1199 aa16.49■□□□□ 0.23
VPS16-205ENST00000453689 TRMT1LQ7Z2T5 733 aaKnown RBP16.49■□□□□ 0.23
VPS16-205ENST00000453689 RPAINQ86UA6 219 aa16.49■□□□□ 0.23
VPS16-205ENST00000453689 FERMT3Q86UX7 667 aa16.49■□□□□ 0.23
VPS16-205ENST00000453689 BBXQ8WY36 941 aaPredicted RBP16.49■□□□□ 0.23
VPS16-205ENST00000453689 ZSCAN16Q9H4T2 348 aaPredicted RBP16.49■□□□□ 0.23
VPS16-205ENST00000453689 SZT2Q5T011 3432 aa16.48■□□□□ 0.23
VPS16-205ENST00000453689 EML1O00423 815 aa16.48■□□□□ 0.23
VPS16-205ENST00000453689 MARCH6O60337 910 aa16.48■□□□□ 0.23
VPS16-205ENST00000453689 BAG4O95429 457 aaKnown RBP16.48■□□□□ 0.23
VPS16-205ENST00000453689 BRD1O95696 1058 aa16.48■□□□□ 0.23
VPS16-205ENST00000453689 ACTN1P12814 892 aa16.48■□□□□ 0.23
VPS16-205ENST00000453689 SMAD3P84022 425 aaKnown RBP16.48■□□□□ 0.23
VPS16-205ENST00000453689 PRKCEQ02156 737 aa16.48■□□□□ 0.23
VPS16-205ENST00000453689 ZNF484Q5JVG2 852 aa16.48■□□□□ 0.23
VPS16-205ENST00000453689 FAM26DQ5JW98 314 aa16.48■□□□□ 0.23
VPS16-205ENST00000453689 FAM109BQ6ICB4 259 aaPredicted RBP16.48■□□□□ 0.23
VPS16-205ENST00000453689 SLFN12Q8IYM2 578 aa16.48■□□□□ 0.23
VPS16-205ENST00000453689 DNAJB3Q8WWF6 145 aa16.48■□□□□ 0.23
VPS16-205ENST00000453689 FAM167AQ96KS9 214 aa16.48■□□□□ 0.23
VPS16-205ENST00000453689 PCDHA2Q9Y5H9 948 aa16.48■□□□□ 0.23
VPS16-205ENST00000453689 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.47■□□□□ 0.23
VPS16-205ENST00000453689 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.47■□□□□ 0.23
VPS16-205ENST00000453689 ZBBXA8MT70 800 aa16.47■□□□□ 0.23
VPS16-205ENST00000453689 NEMFO60524 1076 aa16.47■□□□□ 0.23
VPS16-205ENST00000453689 F13A1P00488 732 aa16.47■□□□□ 0.23
VPS16-205ENST00000453689 OATP04181 439 aa16.47■□□□□ 0.23
VPS16-205ENST00000453689 ATP2B1P20020 1258 aa16.47■□□□□ 0.23
VPS16-205ENST00000453689 KLRC1P26715 233 aa16.47■□□□□ 0.23
VPS16-205ENST00000453689 NUCB2P80303 420 aa16.47■□□□□ 0.23
VPS16-205ENST00000453689 MGAT3Q09327 533 aa16.47■□□□□ 0.23
VPS16-205ENST00000453689 CALCRLQ16602 461 aa16.47■□□□□ 0.23
VPS16-205ENST00000453689 TCTN1Q2MV58 587 aa16.47■□□□□ 0.23
VPS16-205ENST00000453689 RILPL1Q5EBL4 403 aa16.47■□□□□ 0.23
VPS16-205ENST00000453689 GPR153Q6NV75 609 aa16.47■□□□□ 0.23
VPS16-205ENST00000453689 CNKSR3Q6P9H4 555 aa16.47■□□□□ 0.23
VPS16-205ENST00000453689 MTHFD1LQ6UB35 978 aa16.47■□□□□ 0.23
VPS16-205ENST00000453689 OSBPL7Q9BZF2 842 aa16.47■□□□□ 0.23
VPS16-205ENST00000453689 FAM49AQ9H0Q0 323 aaPredicted RBP16.47■□□□□ 0.23
VPS16-205ENST00000453689 CIZ1Q9ULV3 898 aaPredicted RBP16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms