RNA–Protein interactions for RNA: ENST00000453260.6

TNFRSF25-207, Transcript of TNF receptor superfamily member 25, humanhuman

TSL 2

Gene TNFRSF25, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-207ENST00000453260 BICD2Q8TD16 824 aa20.92■□□□□ 0.94
TNFRSF25-207ENST00000453260 ZMYND12Q9H0C1 365 aa20.92■□□□□ 0.94
TNFRSF25-207ENST00000453260 UBE2ZQ9H832 354 aaPredicted RBP20.92■□□□□ 0.94
TNFRSF25-207ENST00000453260 TCEAL9Q9UHQ7 104 aa20.92■□□□□ 0.94
TNFRSF25-207ENST00000453260 TRPV2Q9Y5S1 764 aa20.92■□□□□ 0.94
TNFRSF25-207ENST00000453260 SNX14Q9Y5W7 946 aa20.92■□□□□ 0.94
TNFRSF25-207ENST00000453260 COL4A6Q14031 1691 aa20.92■□□□□ 0.94
TNFRSF25-207ENST00000453260 IGKV6D-21A0A0A0MT36 114 aa20.91■□□□□ 0.94
TNFRSF25-207ENST00000453260 SMIM35A0A1B0GVV1 85 aa20.91■□□□□ 0.94
TNFRSF25-207ENST00000453260 DDX39AO00148 427 aaKnown RBP20.91■□□□□ 0.94
TNFRSF25-207ENST00000453260 IPO5O00410 1097 aaKnown RBP20.91■□□□□ 0.94
TNFRSF25-207ENST00000453260 HBP1O60381 514 aa20.91■□□□□ 0.94
TNFRSF25-207ENST00000453260 RALGAPA2Q2PPJ7 1873 aa20.91■□□□□ 0.94
TNFRSF25-207ENST00000453260 MIS18BP1Q6P0N0 1132 aa20.91■□□□□ 0.94
TNFRSF25-207ENST00000453260 MTHFD1LQ6UB35 978 aa20.91■□□□□ 0.94
TNFRSF25-207ENST00000453260 ABHD15Q6UXT9 468 aa20.91■□□□□ 0.94
TNFRSF25-207ENST00000453260 REXO1Q8N1G1 1221 aaKnown RBP20.91■□□□□ 0.94
TNFRSF25-207ENST00000453260 C1QTNF1Q9BXJ1 281 aa20.91■□□□□ 0.94
TNFRSF25-207ENST00000453260 CELF4Q9BZC1 486 aaKnown RBP20.91■□□□□ 0.94
TNFRSF25-207ENST00000453260 TBC1D22BQ9NU19 505 aa20.91■□□□□ 0.94
TNFRSF25-207ENST00000453260 MYO7AQ13402 2215 aa20.9■□□□□ 0.94
TNFRSF25-207ENST00000453260 MYH9P35579 1960 aaKnown RBP20.9■□□□□ 0.94
TNFRSF25-207ENST00000453260 FAM86B1E9PN63 330 aa20.9■□□□□ 0.94
TNFRSF25-207ENST00000453260 FAM86B2P0C5J1 330 aa20.9■□□□□ 0.94
TNFRSF25-207ENST00000453260 RPS6KB1P23443 525 aa20.9■□□□□ 0.94
TNFRSF25-207ENST00000453260 CD52P31358 61 aa20.9■□□□□ 0.94
TNFRSF25-207ENST00000453260 CTNNB1P35222 781 aa20.9■□□□□ 0.94
TNFRSF25-207ENST00000453260 SETQ01105 290 aaPredicted RBP20.9■□□□□ 0.94
TNFRSF25-207ENST00000453260 BTG3Q14201 252 aaPredicted RBP20.9■□□□□ 0.94
TNFRSF25-207ENST00000453260 PDXDC2PQ6P474 469 aa20.9■□□□□ 0.94
TNFRSF25-207ENST00000453260 BANK1Q8NDB2 785 aa20.9■□□□□ 0.94
TNFRSF25-207ENST00000453260 TRAPPC12Q8WVT3 735 aa20.9■□□□□ 0.94
TNFRSF25-207ENST00000453260 ZNF577Q9BSK1 485 aa20.9■□□□□ 0.94
TNFRSF25-207ENST00000453260 C11orf84Q9BUA3 381 aaPredicted RBP20.9■□□□□ 0.94
TNFRSF25-207ENST00000453260 ZNF302Q9NR11 478 aa20.9■□□□□ 0.94
TNFRSF25-207ENST00000453260 LOXHD1Q8IVV2 1947 aa20.9■□□□□ 0.94
TNFRSF25-207ENST00000453260 ADGRA3Q8IWK6 1321 aa20.89■□□□□ 0.93
TNFRSF25-207ENST00000453260 CCNE2O96020 404 aa20.89■□□□□ 0.93
TNFRSF25-207ENST00000453260 KCNA5P22460 613 aa20.89■□□□□ 0.93
TNFRSF25-207ENST00000453260 KLRC1P26715 233 aa20.89■□□□□ 0.93
TNFRSF25-207ENST00000453260 BMPR1AP36894 532 aa20.89■□□□□ 0.93
TNFRSF25-207ENST00000453260 KRT76Q01546 638 aa20.89■□□□□ 0.93
TNFRSF25-207ENST00000453260 TMEM62Q0P6H9 643 aa20.89■□□□□ 0.93
TNFRSF25-207ENST00000453260 PAK2Q13177 524 aa20.89■□□□□ 0.93
TNFRSF25-207ENST00000453260 LEXMQ3ZCV2 418 aa20.89■□□□□ 0.93
TNFRSF25-207ENST00000453260 ZNF484Q5JVG2 852 aa20.89■□□□□ 0.93
TNFRSF25-207ENST00000453260 CCDC148Q8NFR7 591 aa20.89■□□□□ 0.93
TNFRSF25-207ENST00000453260 ATP8B4Q8TF62 1192 aa20.89■□□□□ 0.93
TNFRSF25-207ENST00000453260 ZBTB10Q96DT7 871 aa20.89■□□□□ 0.93
TNFRSF25-207ENST00000453260 AGO3Q9H9G7 860 aaKnown RBP20.89■□□□□ 0.93
TNFRSF25-207ENST00000453260 PADI3Q9ULW8 664 aa20.89■□□□□ 0.93
TNFRSF25-207ENST00000453260 COL1A2P08123 1366 aa20.88■□□□□ 0.93
TNFRSF25-207ENST00000453260 NID2Q14112 1375 aa20.88■□□□□ 0.93
TNFRSF25-207ENST00000453260 IGSF9BQ9UPX0 1349 aa20.88■□□□□ 0.93
TNFRSF25-207ENST00000453260 KDM3AQ9Y4C1 1321 aa20.88■□□□□ 0.93
TNFRSF25-207ENST00000453260 C5orf67F2Z3F1 127 aa20.88■□□□□ 0.93
TNFRSF25-207ENST00000453260 NCK2O43639 380 aa20.88■□□□□ 0.93
TNFRSF25-207ENST00000453260 STAG3L1P0CL83 205 aa20.88■□□□□ 0.93
TNFRSF25-207ENST00000453260 PKN1Q16512 942 aa20.88■□□□□ 0.93
TNFRSF25-207ENST00000453260 PUS10Q3MIT2 529 aaKnown RBP20.88■□□□□ 0.93
TNFRSF25-207ENST00000453260 ODR4Q5SWX8 454 aa20.88■□□□□ 0.93
TNFRSF25-207ENST00000453260 ZNF746Q6NUN9 644 aaPredicted RBP20.88■□□□□ 0.93
TNFRSF25-207ENST00000453260 SWSAP1Q6NVH7 229 aa20.88■□□□□ 0.93
TNFRSF25-207ENST00000453260 CKAP2LQ8IYA6 745 aa20.88■□□□□ 0.93
TNFRSF25-207ENST00000453260 CRYGNQ8WXF5 182 aa20.88■□□□□ 0.93
TNFRSF25-207ENST00000453260 CLP1Q92989 425 aaKnown RBP20.88■□□□□ 0.93
TNFRSF25-207ENST00000453260 ZNF689Q96CS4 500 aaPredicted RBP20.88■□□□□ 0.93
TNFRSF25-207ENST00000453260 RNF26Q9BY78 433 aaPredicted RBP20.88■□□□□ 0.93
TNFRSF25-207ENST00000453260 AGXT2Q9BYV1 514 aa20.88■□□□□ 0.93
TNFRSF25-207ENST00000453260 LMAN2LQ9H0V9 348 aa20.88■□□□□ 0.93
TNFRSF25-207ENST00000453260 NSUN3Q9H649 340 aaKnown RBP20.88■□□□□ 0.93
TNFRSF25-207ENST00000453260 RNF216Q9NWF9 866 aaPredicted RBP20.88■□□□□ 0.93
TNFRSF25-207ENST00000453260 EVPLQ92817 2033 aa20.88■□□□□ 0.93
TNFRSF25-207ENST00000453260 IGLV3-22A0A075B6J6 115 aa20.87■□□□□ 0.93
TNFRSF25-207ENST00000453260 DHX15O43143 795 aaKnown RBP20.87■□□□□ 0.93
TNFRSF25-207ENST00000453260 DGKIO75912 1065 aa20.87■□□□□ 0.93
TNFRSF25-207ENST00000453260 COL9A1P20849 921 aa20.87■□□□□ 0.93
TNFRSF25-207ENST00000453260 NPAS4Q8IUM7 802 aa20.87■□□□□ 0.93
TNFRSF25-207ENST00000453260 SMAP1Q8IYB5 467 aaPredicted RBP20.87■□□□□ 0.93
TNFRSF25-207ENST00000453260 PHKBQ93100 1093 aa20.87■□□□□ 0.93
TNFRSF25-207ENST00000453260 PLVAPQ9BX97 442 aa20.87■□□□□ 0.93
TNFRSF25-207ENST00000453260 EPB41L2O43491 1005 aaKnown RBP20.86■□□□□ 0.93
TNFRSF25-207ENST00000453260 PSAPP07602 524 aa20.86■□□□□ 0.93
TNFRSF25-207ENST00000453260 IFNAR1P17181 557 aa20.86■□□□□ 0.93
TNFRSF25-207ENST00000453260 PRR16Q569H4 304 aa20.86■□□□□ 0.93
TNFRSF25-207ENST00000453260 CCDC60Q8IWA6 550 aaPredicted RBP20.86■□□□□ 0.93
TNFRSF25-207ENST00000453260 BBXQ8WY36 941 aaPredicted RBP20.86■□□□□ 0.93
TNFRSF25-207ENST00000453260 SLC26A6Q9BXS9 759 aa20.86■□□□□ 0.93
TNFRSF25-207ENST00000453260 RC3H2Q9HBD1 1191 aaKnown RBP20.86■□□□□ 0.93
TNFRSF25-207ENST00000453260 LRFN2Q9ULH4 789 aa20.86■□□□□ 0.93
TNFRSF25-207ENST00000453260 GINS2Q9Y248 185 aa20.86■□□□□ 0.93
TNFRSF25-207ENST00000453260 PCDHA10Q9Y5I2 948 aa20.86■□□□□ 0.93
TNFRSF25-207ENST00000453260 NFX1Q12986 1120 aaKnown RBP20.85■□□□□ 0.93
TNFRSF25-207ENST00000453260 NTRK3Q16288 839 aa20.85■□□□□ 0.93
TNFRSF25-207ENST00000453260 TCEAL5Q5H9L2 206 aa20.85■□□□□ 0.93
TNFRSF25-207ENST00000453260 EP400NLQ6ZTU2 488 aa20.85■□□□□ 0.93
TNFRSF25-207ENST00000453260 RTN4RL1Q86UN2 441 aaPredicted RBP20.85■□□□□ 0.93
TNFRSF25-207ENST00000453260 TRIM22Q8IYM9 498 aa20.85■□□□□ 0.93
TNFRSF25-207ENST00000453260 CMTR2Q8IYT2 770 aaKnown RBP20.85■□□□□ 0.93
TNFRSF25-207ENST00000453260 PABPC5Q96DU9 382 aaKnown RBP20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms