RNA–Protein interactions for RNA: ENST00000452143.5

USP1-204, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 3

Gene USP1, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-204ENST00000452143 INSRRP14616 1297 aa12.44□□□□□ -0.42
USP1-204ENST00000452143 NAPAP54920 295 aa12.44□□□□□ -0.42
USP1-204ENST00000452143 AP3B2Q13367 1082 aa12.44□□□□□ -0.42
USP1-204ENST00000452143 COL9A3Q14050 684 aaPredicted RBP12.44□□□□□ -0.42
USP1-204ENST00000452143 CTC1Q2NKJ3 1217 aa12.44□□□□□ -0.42
USP1-204ENST00000452143 CEP55Q53EZ4 464 aa12.44□□□□□ -0.42
USP1-204ENST00000452143 WWC2Q6AWC2 1192 aa12.44□□□□□ -0.42
USP1-204ENST00000452143 CMTR2Q8IYT2 770 aaKnown RBP12.44□□□□□ -0.42
USP1-204ENST00000452143 CCDC82Q8N4S0 544 aa12.44□□□□□ -0.42
USP1-204ENST00000452143 P2RX5Q93086 422 aa12.44□□□□□ -0.42
USP1-204ENST00000452143 PCYT2Q99447 389 aa12.44□□□□□ -0.42
USP1-204ENST00000452143 MXRA8Q9BRK3 442 aa12.44□□□□□ -0.42
USP1-204ENST00000452143 FAM49AQ9H0Q0 323 aaPredicted RBP12.44□□□□□ -0.42
USP1-204ENST00000452143 GLT8D2Q9H1C3 349 aa12.44□□□□□ -0.42
USP1-204ENST00000452143 RIC8AQ9NPQ8 531 aa12.44□□□□□ -0.42
USP1-204ENST00000452143 CLDND1Q9NY35 253 aa12.44□□□□□ -0.42
USP1-204ENST00000452143 TRPC6Q9Y210 931 aa12.44□□□□□ -0.42
USP1-204ENST00000452143 TRPV2Q9Y5S1 764 aa12.44□□□□□ -0.42
USP1-204ENST00000452143 MYH9P35579 1960 aaKnown RBP12.43□□□□□ -0.42
USP1-204ENST00000452143 KDM3AQ9Y4C1 1321 aa12.43□□□□□ -0.42
USP1-204ENST00000452143 FNDC1Q4ZHG4 1894 aaPredicted RBP12.43□□□□□ -0.42
USP1-204ENST00000452143 SMIM35A0A1B0GVV1 85 aa12.43□□□□□ -0.42
USP1-204ENST00000452143 FAM86C2PA6NEL3 165 aa12.43□□□□□ -0.42
USP1-204ENST00000452143 C7P10643 843 aa12.43□□□□□ -0.42
USP1-204ENST00000452143 CD52P31358 61 aa12.43□□□□□ -0.42
USP1-204ENST00000452143 RCAN1P53805 252 aa12.43□□□□□ -0.42
USP1-204ENST00000452143 ACTR2P61160 394 aa12.43□□□□□ -0.42
USP1-204ENST00000452143 IGBP1P78318 339 aa12.43□□□□□ -0.42
USP1-204ENST00000452143 ZP2Q05996 745 aa12.43□□□□□ -0.42
USP1-204ENST00000452143 NAALADL2Q58DX5 795 aa12.43□□□□□ -0.42
USP1-204ENST00000452143 RAB11FIP4Q86YS3 637 aa12.43□□□□□ -0.42
USP1-204ENST00000452143 NPAS4Q8IUM7 802 aa12.43□□□□□ -0.42
USP1-204ENST00000452143 CRIPAKQ8N1N5 446 aa12.43□□□□□ -0.42
USP1-204ENST00000452143 LINC01599Q8WXQ3 324 aa12.43□□□□□ -0.42
USP1-204ENST00000452143 SLC39A7Q92504 469 aa12.43□□□□□ -0.42
USP1-204ENST00000452143 PPP2R3CQ969Q6 453 aa12.43□□□□□ -0.42
USP1-204ENST00000452143 POP1Q99575 1024 aaKnown RBP12.43□□□□□ -0.42
USP1-204ENST00000452143 LRRC2Q9BYS8 371 aa12.43□□□□□ -0.42
USP1-204ENST00000452143 ANO3Q9BYT9 981 aa12.43□□□□□ -0.42
USP1-204ENST00000452143 AGO3Q9H9G7 860 aaKnown RBP12.43□□□□□ -0.42
USP1-204ENST00000452143 PCDHA2Q9Y5H9 948 aa12.43□□□□□ -0.42
USP1-204ENST00000452143 PLXNA4Q9HCM2 1894 aa12.42□□□□□ -0.42
USP1-204ENST00000452143 GRM6O15303 877 aa12.42□□□□□ -0.42
USP1-204ENST00000452143 ZBTB43O43298 467 aa12.42□□□□□ -0.42
USP1-204ENST00000452143 STAG3L1P0CL83 205 aa12.42□□□□□ -0.42
USP1-204ENST00000452143 SREBF1P36956 1147 aa12.42□□□□□ -0.42
USP1-204ENST00000452143 STAT5BP51692 787 aa12.42□□□□□ -0.42
USP1-204ENST00000452143 ADCY7P51828 1080 aa12.42□□□□□ -0.42
USP1-204ENST00000452143 HYAL1Q12794 435 aa12.42□□□□□ -0.42
USP1-204ENST00000452143 PAK2Q13177 524 aa12.42□□□□□ -0.42
USP1-204ENST00000452143 ITGB3BPQ13352 177 aaPredicted RBP12.42□□□□□ -0.42
USP1-204ENST00000452143 PLCB4Q15147 1175 aa12.42□□□□□ -0.42
USP1-204ENST00000452143 RTN1Q16799 776 aa12.42□□□□□ -0.42
USP1-204ENST00000452143 BMP2KLQ5H9B9 411 aa12.42□□□□□ -0.42
USP1-204ENST00000452143 TYW1BQ6NUM6 668 aa12.42□□□□□ -0.42
USP1-204ENST00000452143 EP400NLQ6ZTU2 488 aa12.42□□□□□ -0.42
USP1-204ENST00000452143 NIPA1Q7RTP0 329 aa12.42□□□□□ -0.42
USP1-204ENST00000452143 ADHFE1Q8IWW8 467 aa12.42□□□□□ -0.42
USP1-204ENST00000452143 NME8Q8N427 588 aa12.42□□□□□ -0.42
USP1-204ENST00000452143 AGO4Q9HCK5 861 aaKnown RBP12.42□□□□□ -0.42
USP1-204ENST00000452143 BARHL2Q9NY43 387 aa12.42□□□□□ -0.42
USP1-204ENST00000452143 PADI3Q9ULW8 664 aa12.42□□□□□ -0.42
USP1-204ENST00000452143 ZNF318Q5VUA4 2279 aa12.42□□□□□ -0.42
USP1-204ENST00000452143 EVPLQ92817 2033 aa12.42□□□□□ -0.42
USP1-204ENST00000452143 COL1A2P08123 1366 aa12.42□□□□□ -0.42
USP1-204ENST00000452143 WDR81Q562E7 1941 aa12.41□□□□□ -0.42
USP1-204ENST00000452143 IGKV6D-21A0A0A0MT36 114 aa12.41□□□□□ -0.42
USP1-204ENST00000452143 POTEB3A0JP26 581 aa12.41□□□□□ -0.42
USP1-204ENST00000452143 STXBP3O00186 592 aa12.41□□□□□ -0.42
USP1-204ENST00000452143 MEIS1O00470 390 aa12.41□□□□□ -0.42
USP1-204ENST00000452143 DCXO43602 365 aa12.41□□□□□ -0.42
USP1-204ENST00000452143 ATG7O95352 703 aa12.41□□□□□ -0.42
USP1-204ENST00000452143 SCG2P13521 617 aa12.41□□□□□ -0.42
USP1-204ENST00000452143 LTBRP36941 435 aa12.41□□□□□ -0.42
USP1-204ENST00000452143 CLK2P49760 499 aaKnown RBP12.41□□□□□ -0.42
USP1-204ENST00000452143 IRX6P78412 446 aaPredicted RBP12.41□□□□□ -0.42
USP1-204ENST00000452143 FUT2Q10981 343 aa12.41□□□□□ -0.42
USP1-204ENST00000452143 SMAD2Q15796 467 aaKnown RBP12.41□□□□□ -0.42
USP1-204ENST00000452143 ASTLQ6HA08 431 aaPredicted RBP12.41□□□□□ -0.42
USP1-204ENST00000452143 POTEBQ6S5H4 581 aa12.41□□□□□ -0.42
USP1-204ENST00000452143 CYP2W1Q8TAV3 490 aa12.41□□□□□ -0.42
USP1-204ENST00000452143 NEK1Q96PY6 1258 aa12.41□□□□□ -0.42
USP1-204ENST00000452143 CELF4Q9BZC1 486 aaKnown RBP12.41□□□□□ -0.42
USP1-204ENST00000452143 PLAGL2Q9UPG8 496 aa12.41□□□□□ -0.42
USP1-204ENST00000452143 MRPL42Q9Y6G3 142 aaKnown RBP12.41□□□□□ -0.42
USP1-204ENST00000452143 HBP1O60381 514 aa12.4□□□□□ -0.42
USP1-204ENST00000452143 TBX10O75333 385 aa12.4□□□□□ -0.42
USP1-204ENST00000452143 ARP10275 920 aa12.4□□□□□ -0.42
USP1-204ENST00000452143 KRT76Q01546 638 aa12.4□□□□□ -0.42
USP1-204ENST00000452143 EXOSC10Q01780 885 aaKnown RBP12.4□□□□□ -0.42
USP1-204ENST00000452143 TMEM62Q0P6H9 643 aa12.4□□□□□ -0.42
USP1-204ENST00000452143 SMAD4Q13485 552 aaKnown RBP12.4□□□□□ -0.42
USP1-204ENST00000452143 KRT32Q14532 448 aa12.4□□□□□ -0.42
USP1-204ENST00000452143 CSPP1Q1MSJ5 1256 aa12.4□□□□□ -0.42
USP1-204ENST00000452143 TSGA10IPQ3SY00 556 aa12.4□□□□□ -0.42
USP1-204ENST00000452143 ODR4Q5SWX8 454 aa12.4□□□□□ -0.42
USP1-204ENST00000452143 FAM160B1Q5W0V3 765 aa12.4□□□□□ -0.42
USP1-204ENST00000452143 MTHFD1LQ6UB35 978 aa12.4□□□□□ -0.42
USP1-204ENST00000452143 DHX32Q7L7V1 743 aaKnown RBP12.4□□□□□ -0.42
USP1-204ENST00000452143 ATP8B4Q8TF62 1192 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms