RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 MCTP2Q6DN12 878 aa19.29■□□□□ 0.68
PRPF40A-204ENST00000450303 BICD2Q8TD16 824 aa19.29■□□□□ 0.68
PRPF40A-204ENST00000450303 TRAPPC12Q8WVT3 735 aa19.29■□□□□ 0.68
PRPF40A-204ENST00000450303 DNAJB3Q8WWF6 145 aa19.29■□□□□ 0.68
PRPF40A-204ENST00000450303 C8orf76Q96K31 380 aa19.29■□□□□ 0.68
PRPF40A-204ENST00000450303 ZNF577Q9BSK1 485 aa19.29■□□□□ 0.68
PRPF40A-204ENST00000450303 H3BQV1 296 aa19.28■□□□□ 0.68
PRPF40A-204ENST00000450303 IPO5O00410 1097 aaKnown RBP19.28■□□□□ 0.68
PRPF40A-204ENST00000450303 BACH1O14867 736 aa19.28■□□□□ 0.68
PRPF40A-204ENST00000450303 CAND2O75155 1236 aa19.28■□□□□ 0.68
PRPF40A-204ENST00000450303 ATG7O95352 703 aa19.28■□□□□ 0.68
PRPF40A-204ENST00000450303 CHRNA1P02708 482 aa19.28■□□□□ 0.68
PRPF40A-204ENST00000450303 PRR16Q569H4 304 aa19.28■□□□□ 0.68
PRPF40A-204ENST00000450303 FAM26DQ5JW98 314 aa19.28■□□□□ 0.68
PRPF40A-204ENST00000450303 PLPPR4Q7Z2D5 763 aa19.28■□□□□ 0.68
PRPF40A-204ENST00000450303 ARNTL2Q8WYA1 636 aa19.28■□□□□ 0.68
PRPF40A-204ENST00000450303 SEPT8Q92599 483 aa19.28■□□□□ 0.68
PRPF40A-204ENST00000450303 FAM49AQ9H0Q0 323 aaPredicted RBP19.28■□□□□ 0.68
PRPF40A-204ENST00000450303 PRDM6Q9NQX0 595 aa19.28■□□□□ 0.68
PRPF40A-204ENST00000450303 SIP14410 1827 aa19.28■□□□□ 0.68
PRPF40A-204ENST00000450303 MBLAC1A4D2B0 266 aaPredicted RBP19.27■□□□□ 0.68
PRPF40A-204ENST00000450303 EPOPA6NHQ4 379 aa19.27■□□□□ 0.68
PRPF40A-204ENST00000450303 RRN3P2A6NIE6 340 aa19.27■□□□□ 0.68
PRPF40A-204ENST00000450303 EDIL3O43854 480 aa19.27■□□□□ 0.68
PRPF40A-204ENST00000450303 EFCAB14O75071 495 aa19.27■□□□□ 0.68
PRPF40A-204ENST00000450303 TAF2Q6P1X5 1199 aa19.27■□□□□ 0.68
PRPF40A-204ENST00000450303 ABHD15Q6UXT9 468 aa19.27■□□□□ 0.68
PRPF40A-204ENST00000450303 MYOCDQ8IZQ8 938 aa19.27■□□□□ 0.68
PRPF40A-204ENST00000450303 POTEB3A0JP26 581 aa19.26■□□□□ 0.67
PRPF40A-204ENST00000450303 GJB5O95377 273 aa19.26■□□□□ 0.67
PRPF40A-204ENST00000450303 AMHP03971 560 aa19.26■□□□□ 0.67
PRPF40A-204ENST00000450303 GHRP10912 638 aa19.26■□□□□ 0.67
PRPF40A-204ENST00000450303 SAFBQ15424 915 aaKnown RBP eCLIP19.26■□□□□ 0.67
PRPF40A-204ENST00000450303 SWSAP1Q6NVH7 229 aa19.26■□□□□ 0.67
PRPF40A-204ENST00000450303 POTEBQ6S5H4 581 aa19.26■□□□□ 0.67
PRPF40A-204ENST00000450303 RSPH3Q86UC2 560 aa19.26■□□□□ 0.67
PRPF40A-204ENST00000450303 CCDC60Q8IWA6 550 aaPredicted RBP19.26■□□□□ 0.67
PRPF40A-204ENST00000450303 MICALL1Q8N3F8 863 aa19.26■□□□□ 0.67
PRPF40A-204ENST00000450303 BRMS1Q9HCU9 246 aa19.26■□□□□ 0.67
PRPF40A-204ENST00000450303 PCDHA4Q9UN74 947 aa19.26■□□□□ 0.67
PRPF40A-204ENST00000450303 LOXHD1Q8IVV2 1947 aa19.25■□□□□ 0.67
PRPF40A-204ENST00000450303 EYSQ5T1H1 3165 aa19.25■□□□□ 0.67
PRPF40A-204ENST00000450303 MYH9P35579 1960 aaKnown RBP19.25■□□□□ 0.67
PRPF40A-204ENST00000450303 IGKV6D-21A0A0A0MT36 114 aa19.25■□□□□ 0.67
PRPF40A-204ENST00000450303 UPP2O95045 317 aa19.25■□□□□ 0.67
PRPF40A-204ENST00000450303 CIITAP33076 1130 aa19.25■□□□□ 0.67
PRPF40A-204ENST00000450303 SETQ01105 290 aaPredicted RBP19.25■□□□□ 0.67
PRPF40A-204ENST00000450303 MGAT3Q09327 533 aa19.25■□□□□ 0.67
PRPF40A-204ENST00000450303 TMEM62Q0P6H9 643 aa19.25■□□□□ 0.67
PRPF40A-204ENST00000450303 MKRN4PQ13434 485 aaPredicted RBP19.25■□□□□ 0.67
PRPF40A-204ENST00000450303 FAM160B1Q5W0V3 765 aa19.25■□□□□ 0.67
PRPF40A-204ENST00000450303 GALNT17Q6IS24 598 aa19.25■□□□□ 0.67
PRPF40A-204ENST00000450303 MIS18BP1Q6P0N0 1132 aa19.25■□□□□ 0.67
PRPF40A-204ENST00000450303 TRMT1LQ7Z2T5 733 aaKnown RBP19.25■□□□□ 0.67
PRPF40A-204ENST00000450303 TBCKQ8TEA7 893 aa19.25■□□□□ 0.67
PRPF40A-204ENST00000450303 RAD9AQ99638 391 aa19.25■□□□□ 0.67
PRPF40A-204ENST00000450303 IFIH1Q9BYX4 1025 aaKnown RBP19.25■□□□□ 0.67
PRPF40A-204ENST00000450303 ZNF302Q9NR11 478 aa19.25■□□□□ 0.67
PRPF40A-204ENST00000450303 TBC1D22BQ9NU19 505 aa19.25■□□□□ 0.67
PRPF40A-204ENST00000450303 KCNJ14Q9UNX9 436 aa19.25■□□□□ 0.67
PRPF40A-204ENST00000450303 CDY2AQ9Y6F7 541 aa19.25■□□□□ 0.67
PRPF40A-204ENST00000450303 CHD7Q9P2D1 2997 aa19.24■□□□□ 0.67
PRPF40A-204ENST00000450303 EVPLQ92817 2033 aa19.24■□□□□ 0.67
PRPF40A-204ENST00000450303 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.24■□□□□ 0.67
PRPF40A-204ENST00000450303 ATP4AP20648 1035 aa19.24■□□□□ 0.67
PRPF40A-204ENST00000450303 FOSBP53539 338 aa19.24■□□□□ 0.67
PRPF40A-204ENST00000450303 LPIN1Q14693 890 aa19.24■□□□□ 0.67
PRPF40A-204ENST00000450303 KRT40Q6A162 431 aa19.24■□□□□ 0.67
PRPF40A-204ENST00000450303 PDXDC2PQ6P474 469 aa19.24■□□□□ 0.67
PRPF40A-204ENST00000450303 RPAINQ86UA6 219 aa19.24■□□□□ 0.67
PRPF40A-204ENST00000450303 BLIDQ8IZY5 108 aa19.24■□□□□ 0.67
PRPF40A-204ENST00000450303 FBXO18Q8NFZ0 1043 aa19.24■□□□□ 0.67
PRPF40A-204ENST00000450303 TNPO1Q92973 898 aaKnown RBP19.24■□□□□ 0.67
PRPF40A-204ENST00000450303 GJA10Q969M2 543 aa19.24■□□□□ 0.67
PRPF40A-204ENST00000450303 LENG9Q96B70 501 aa19.24■□□□□ 0.67
PRPF40A-204ENST00000450303 MTUS1Q9ULD2 1270 aa19.24■□□□□ 0.67
PRPF40A-204ENST00000450303 WDR81Q562E7 1941 aa19.23■□□□□ 0.67
PRPF40A-204ENST00000450303 MSH4O15457 936 aa19.23■□□□□ 0.67
PRPF40A-204ENST00000450303 STX6O43752 255 aa19.23■□□□□ 0.67
PRPF40A-204ENST00000450303 SYT1P21579 422 aa19.23■□□□□ 0.67
PRPF40A-204ENST00000450303 NUCB2P80303 420 aa19.23■□□□□ 0.67
PRPF40A-204ENST00000450303 MRPS6P82932 125 aaKnown RBP19.23■□□□□ 0.67
PRPF40A-204ENST00000450303 MTHFD1LQ6UB35 978 aa19.23■□□□□ 0.67
PRPF40A-204ENST00000450303 CKAP2LQ8IYA6 745 aa19.23■□□□□ 0.67
PRPF40A-204ENST00000450303 GJB4Q9NTQ9 266 aa19.23■□□□□ 0.67
PRPF40A-204ENST00000450303 CIZ1Q9ULV3 898 aaPredicted RBP19.23■□□□□ 0.67
PRPF40A-204ENST00000450303 SAMM50Q9Y512 469 aa19.23■□□□□ 0.67
PRPF40A-204ENST00000450303 PCDHA2Q9Y5H9 948 aa19.23■□□□□ 0.67
PRPF40A-204ENST00000450303 LINC01553A4QN01 128 aa19.22■□□□□ 0.67
PRPF40A-204ENST00000450303 VPS37CA5D8V6 355 aaPredicted RBP19.22■□□□□ 0.67
PRPF40A-204ENST00000450303 M0R2N6 131 aa19.22■□□□□ 0.67
PRPF40A-204ENST00000450303 HBP1O60381 514 aa19.22■□□□□ 0.67
PRPF40A-204ENST00000450303 KLRC1P26715 233 aa19.22■□□□□ 0.67
PRPF40A-204ENST00000450303 SLC26A2P50443 739 aa19.22■□□□□ 0.67
PRPF40A-204ENST00000450303 USP11P51784 963 aa19.22■□□□□ 0.67
PRPF40A-204ENST00000450303 GNL2Q13823 731 aaKnown RBP19.22■□□□□ 0.67
PRPF40A-204ENST00000450303 NPY5RQ15761 445 aa19.22■□□□□ 0.67
PRPF40A-204ENST00000450303 FBXO47Q5MNV8 452 aa19.22■□□□□ 0.67
PRPF40A-204ENST00000450303 ZNF746Q6NUN9 644 aaPredicted RBP19.22■□□□□ 0.67
PRPF40A-204ENST00000450303 ATP8B4Q8TF62 1192 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms