RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 IPO5O00410 1097 aaKnown RBP16.5■□□□□ 0.23
USP39-206ENST00000448971 CXCL10P02778 98 aa16.5■□□□□ 0.23
USP39-206ENST00000448971 CIITAP33076 1130 aa16.5■□□□□ 0.23
USP39-206ENST00000448971 HMGN5P82970 282 aaKnown RBP16.5■□□□□ 0.23
USP39-206ENST00000448971 INF2Q27J81 1249 aa16.5■□□□□ 0.23
USP39-206ENST00000448971 TCTN1Q2MV58 587 aa16.5■□□□□ 0.23
USP39-206ENST00000448971 PIK3AP1Q6ZUJ8 805 aa16.5■□□□□ 0.23
USP39-206ENST00000448971 CCDC155Q8N6L0 562 aa16.5■□□□□ 0.23
USP39-206ENST00000448971 FAM184AQ8NB25 1140 aa16.5■□□□□ 0.23
USP39-206ENST00000448971 OXER1Q8TDS5 423 aa16.5■□□□□ 0.23
USP39-206ENST00000448971 FAM122AQ96E09 287 aa16.5■□□□□ 0.23
USP39-206ENST00000448971 LRFN3Q9BTN0 628 aa16.5■□□□□ 0.23
USP39-206ENST00000448971 AZI2Q9H6S1 392 aa16.5■□□□□ 0.23
USP39-206ENST00000448971 LMCD1Q9NZU5 365 aa16.5■□□□□ 0.23
USP39-206ENST00000448971 EMSYQ7Z589 1322 aa16.49■□□□□ 0.23
USP39-206ENST00000448971 C17orf102A2RUQ5 167 aa16.49■□□□□ 0.23
USP39-206ENST00000448971 RBAK-RBAKDNI3L0D1 243 aa16.49■□□□□ 0.23
USP39-206ENST00000448971 NBNO60934 754 aa16.49■□□□□ 0.23
USP39-206ENST00000448971 TDP2O95551 362 aa16.49■□□□□ 0.23
USP39-206ENST00000448971 MMP1P03956 469 aa16.49■□□□□ 0.23
USP39-206ENST00000448971 PRR29P0C7W0 189 aa16.49■□□□□ 0.23
USP39-206ENST00000448971 SMIM10L2AP0DMW4 78 aa16.49■□□□□ 0.23
USP39-206ENST00000448971 SMIM10L2BP0DMW5 78 aa16.49■□□□□ 0.23
USP39-206ENST00000448971 SELPP16109 830 aa16.49■□□□□ 0.23
USP39-206ENST00000448971 MARK3P27448 753 aa16.49■□□□□ 0.23
USP39-206ENST00000448971 USP11P51784 963 aa16.49■□□□□ 0.23
USP39-206ENST00000448971 ACTR2P61160 394 aa16.49■□□□□ 0.23
USP39-206ENST00000448971 DEFB103AP81534 67 aa16.49■□□□□ 0.23
USP39-206ENST00000448971 LETM2Q2VYF4 491 aa16.49■□□□□ 0.23
USP39-206ENST00000448971 KHSRPQ92945 711 aaKnown RBP eCLIP16.49■□□□□ 0.23
USP39-206ENST00000448971 PIEZO1Q92508 2521 aa16.49■□□□□ 0.23
USP39-206ENST00000448971 GSTTP1A0A1W2PQM5 241 aa16.48■□□□□ 0.23
USP39-206ENST00000448971 CKBP12277 381 aa16.48■□□□□ 0.23
USP39-206ENST00000448971 KCNJ6P48051 423 aa16.48■□□□□ 0.23
USP39-206ENST00000448971 MCM2P49736 904 aa16.48■□□□□ 0.23
USP39-206ENST00000448971 NR5A1Q13285 461 aa16.48■□□□□ 0.23
USP39-206ENST00000448971 CNKSR3Q6P9H4 555 aa16.48■□□□□ 0.23
USP39-206ENST00000448971 TRAF7Q6Q0C0 670 aa16.48■□□□□ 0.23
USP39-206ENST00000448971 LRRC8DQ7L1W4 858 aa16.48■□□□□ 0.23
USP39-206ENST00000448971 NEK8Q86SG6 692 aa16.48■□□□□ 0.23
USP39-206ENST00000448971 DIS3L2Q8IYB7 885 aaKnown RBP16.48■□□□□ 0.23
USP39-206ENST00000448971 LENG9Q96B70 501 aa16.48■□□□□ 0.23
USP39-206ENST00000448971 C8orf76Q96K31 380 aa16.48■□□□□ 0.23
USP39-206ENST00000448971 SMARCAD1Q9H4L7 1026 aa16.48■□□□□ 0.23
USP39-206ENST00000448971 SUGCTQ9HAC7 445 aa16.48■□□□□ 0.23
USP39-206ENST00000448971 TBC1D22BQ9NU19 505 aa16.48■□□□□ 0.23
USP39-206ENST00000448971 ERAP1Q9NZ08 941 aa16.48■□□□□ 0.23
USP39-206ENST00000448971 ARIH1Q9Y4X5 557 aaPredicted RBP16.48■□□□□ 0.23
USP39-206ENST00000448971 MUC6Q6W4X9 2439 aa16.47■□□□□ 0.23
USP39-206ENST00000448971 BACH1O14867 736 aa16.47■□□□□ 0.23
USP39-206ENST00000448971 GJB5O95377 273 aa16.47■□□□□ 0.23
USP39-206ENST00000448971 CD2BP2O95400 341 aaKnown RBP16.47■□□□□ 0.23
USP39-206ENST00000448971 PARNO95453 639 aaKnown RBP16.47■□□□□ 0.23
USP39-206ENST00000448971 CCNE2O96020 404 aa16.47■□□□□ 0.23
USP39-206ENST00000448971 GUCY1B3Q02153 619 aa16.47■□□□□ 0.23
USP39-206ENST00000448971 SAFBQ15424 915 aaKnown RBP eCLIP16.47■□□□□ 0.23
USP39-206ENST00000448971 TRIM71Q2Q1W2 868 aaKnown RBP16.47■□□□□ 0.23
USP39-206ENST00000448971 MOXD1Q6UVY6 613 aa16.47■□□□□ 0.23
USP39-206ENST00000448971 RAD9AQ99638 391 aa16.47■□□□□ 0.23
USP39-206ENST00000448971 CD320Q9NPF0 282 aa16.47■□□□□ 0.23
USP39-206ENST00000448971 DDX25Q9UHL0 483 aaKnown RBP16.47■□□□□ 0.23
USP39-206ENST00000448971 TRPC6Q9Y210 931 aa16.47■□□□□ 0.23
USP39-206ENST00000448971 SAMM50Q9Y512 469 aa16.47■□□□□ 0.23
USP39-206ENST00000448971 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.46■□□□□ 0.23
USP39-206ENST00000448971 ABHD14A-ACY1A0A1B0GW23 586 aa16.46■□□□□ 0.23
USP39-206ENST00000448971 MSH4O15457 936 aa16.46■□□□□ 0.23
USP39-206ENST00000448971 CHMP2AO43633 222 aa16.46■□□□□ 0.23
USP39-206ENST00000448971 GAS7O60861 476 aa16.46■□□□□ 0.23
USP39-206ENST00000448971 ERVK-21P61565 698 aa16.46■□□□□ 0.23
USP39-206ENST00000448971 ZNF200P98182 395 aaPredicted RBP16.46■□□□□ 0.23
USP39-206ENST00000448971 KRT76Q01546 638 aa16.46■□□□□ 0.23
USP39-206ENST00000448971 PPFIA1Q13136 1202 aa16.46■□□□□ 0.23
USP39-206ENST00000448971 GNL2Q13823 731 aaKnown RBP16.46■□□□□ 0.23
USP39-206ENST00000448971 Q4G0T1 1027 aa16.46■□□□□ 0.23
USP39-206ENST00000448971 LRCH2Q5VUJ6 765 aa16.46■□□□□ 0.23
USP39-206ENST00000448971 FAM160B1Q5W0V3 765 aa16.46■□□□□ 0.23
USP39-206ENST00000448971 MIS18BP1Q6P0N0 1132 aa16.46■□□□□ 0.23
USP39-206ENST00000448971 GDPD5Q8WTR4 605 aa16.46■□□□□ 0.23
USP39-206ENST00000448971 ATP6V0A1Q93050 837 aa16.46■□□□□ 0.23
USP39-206ENST00000448971 WNT8BQ93098 351 aa16.46■□□□□ 0.23
USP39-206ENST00000448971 TMX3Q96JJ7 454 aa16.46■□□□□ 0.23
USP39-206ENST00000448971 NAP1L4Q99733 375 aaKnown RBP16.46■□□□□ 0.23
USP39-206ENST00000448971 ZBED2Q9BTP6 218 aa16.46■□□□□ 0.23
USP39-206ENST00000448971 TEKT3Q9BXF9 490 aa16.46■□□□□ 0.23
USP39-206ENST00000448971 C11orf16Q9NQ32 467 aa16.46■□□□□ 0.23
USP39-206ENST00000448971 KIF3AQ9Y496 699 aa16.46■□□□□ 0.23
USP39-206ENST00000448971 MYO7AQ13402 2215 aa16.45■□□□□ 0.22
USP39-206ENST00000448971 LINC01553A4QN01 128 aa16.45■□□□□ 0.22
USP39-206ENST00000448971 FAM205CA6NFA0 338 aa16.45■□□□□ 0.22
USP39-206ENST00000448971 DHX15O43143 795 aaKnown RBP16.45■□□□□ 0.22
USP39-206ENST00000448971 CCNT1O60563 726 aaKnown RBP16.45■□□□□ 0.22
USP39-206ENST00000448971 GPR37L1O60883 481 aa16.45■□□□□ 0.22
USP39-206ENST00000448971 LGR5O75473 907 aa16.45■□□□□ 0.22
USP39-206ENST00000448971 GNAT1P11488 350 aa16.45■□□□□ 0.22
USP39-206ENST00000448971 GCFC2P16383 781 aaKnown RBP16.45■□□□□ 0.22
USP39-206ENST00000448971 STAT5BP51692 787 aa16.45■□□□□ 0.22
USP39-206ENST00000448971 PTK7Q13308 1070 aa16.45■□□□□ 0.22
USP39-206ENST00000448971 HIC1Q14526 733 aa16.45■□□□□ 0.22
USP39-206ENST00000448971 MBTPS1Q14703 1052 aa16.45■□□□□ 0.22
USP39-206ENST00000448971 ZNF746Q6NUN9 644 aaPredicted RBP16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms