RNA–Protein interactions for RNA: ENST00000448885.5

PCDH15-219, Transcript of protocadherin related 15, humanhuman

TSL 5

Gene PCDH15, Length 6,937 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15-219ENST00000448885 USP28Q96RU2 1077 aa6.63□□□□□ -1.35
PCDH15-219ENST00000448885 CALN1Q9BXU9 219 aa6.63□□□□□ -1.35
PCDH15-219ENST00000448885 NHEJ1Q9H9Q4 299 aaPredicted RBP6.63□□□□□ -1.35
PCDH15-219ENST00000448885 DNAJC17Q9NVM6 304 aaKnown RBP6.63□□□□□ -1.35
PCDH15-219ENST00000448885 MOSPD1Q9UJG1 213 aa6.63□□□□□ -1.35
PCDH15-219ENST00000448885 FNDC3AQ9Y2H6 1198 aaKnown RBP6.63□□□□□ -1.35
PCDH15-219ENST00000448885 YEATS2Q9ULM3 1422 aa6.63□□□□□ -1.35
PCDH15-219ENST00000448885 SHANK2Q9UPX8 1470 aa6.63□□□□□ -1.35
PCDH15-219ENST00000448885 DPYSL4O14531 572 aa6.62□□□□□ -1.35
PCDH15-219ENST00000448885 MYO1DO94832 1006 aa6.62□□□□□ -1.35
PCDH15-219ENST00000448885 LDHAP00338 332 aaKnown RBP6.62□□□□□ -1.35
PCDH15-219ENST00000448885 IREB2P48200 963 aaKnown RBP6.62□□□□□ -1.35
PCDH15-219ENST00000448885 DHX9Q08211 1270 aaKnown RBP6.62□□□□□ -1.35
PCDH15-219ENST00000448885 NNTQ13423 1086 aa6.62□□□□□ -1.35
PCDH15-219ENST00000448885 Q3C1V9 767 aa6.62□□□□□ -1.35
PCDH15-219ENST00000448885 PPP4R3CPQ6ZMV5 832 aa6.62□□□□□ -1.35
PCDH15-219ENST00000448885 SZRD1Q7Z422 152 aa6.62□□□□□ -1.35
PCDH15-219ENST00000448885 KIAA0825Q8IV33 1275 aa6.62□□□□□ -1.35
PCDH15-219ENST00000448885 NEK9Q8TD19 979 aa6.62□□□□□ -1.35
PCDH15-219ENST00000448885 TRIM55Q9BYV6 548 aa6.62□□□□□ -1.35
PCDH15-219ENST00000448885 TRPV6Q9H1D0 765 aa6.62□□□□□ -1.35
PCDH15-219ENST00000448885 CTIFO43310 598 aaKnown RBP6.62□□□□□ -1.35
PCDH15-219ENST00000448885 E2F6O75461 281 aa6.62□□□□□ -1.35
PCDH15-219ENST00000448885 RECQLP46063 649 aaPredicted RBP6.62□□□□□ -1.35
PCDH15-219ENST00000448885 JAK3P52333 1124 aa6.62□□□□□ -1.35
PCDH15-219ENST00000448885 HDAC4P56524 1084 aa6.62□□□□□ -1.35
PCDH15-219ENST00000448885 ZNF827Q17R98 1081 aa6.62□□□□□ -1.35
PCDH15-219ENST00000448885 KCTD1Q719H9 257 aa6.62□□□□□ -1.35
PCDH15-219ENST00000448885 FAM160B2Q86V87 743 aa6.62□□□□□ -1.35
PCDH15-219ENST00000448885 PYROXD1Q8WU10 500 aa6.62□□□□□ -1.35
PCDH15-219ENST00000448885 FSD1LQ9BXM9 530 aa6.62□□□□□ -1.35
PCDH15-219ENST00000448885 EDEM3Q9BZQ6 932 aa6.62□□□□□ -1.35
PCDH15-219ENST00000448885 IKBKBO14920 756 aa6.62□□□□□ -1.35
PCDH15-219ENST00000448885 RPSAP08865 295 aaKnown RBP6.62□□□□□ -1.35
PCDH15-219ENST00000448885 GNAT1P11488 350 aa6.62□□□□□ -1.35
PCDH15-219ENST00000448885 MXD4Q14582 209 aaPredicted RBP6.62□□□□□ -1.35
PCDH15-219ENST00000448885 TRIP13Q15645 432 aaPredicted RBP6.62□□□□□ -1.35
PCDH15-219ENST00000448885 TRIM60Q495X7 471 aa6.62□□□□□ -1.35
PCDH15-219ENST00000448885 LRRC23Q53EV4 343 aaPredicted RBP6.62□□□□□ -1.35
PCDH15-219ENST00000448885 MTRQ99707 1265 aa6.62□□□□□ -1.35
PCDH15-219ENST00000448885 A0A0D9SFI3 127 aa6.62□□□□□ -1.35
PCDH15-219ENST00000448885 PDIA3P30101 505 aaKnown RBP6.62□□□□□ -1.35
PCDH15-219ENST00000448885 MTERF2Q49AM1 385 aa6.62□□□□□ -1.35
PCDH15-219ENST00000448885 SCARA5Q6ZMJ2 495 aa6.62□□□□□ -1.35
PCDH15-219ENST00000448885 ARHGEF25Q86VW2 580 aa6.62□□□□□ -1.35
PCDH15-219ENST00000448885 RAB42Q8N4Z0 105 aa6.62□□□□□ -1.35
PCDH15-219ENST00000448885 C7orf31Q8N865 590 aa6.62□□□□□ -1.35
PCDH15-219ENST00000448885 ASNSD1Q9NWL6 643 aa6.62□□□□□ -1.35
PCDH15-219ENST00000448885 RRP15Q9Y3B9 282 aaKnown RBP6.62□□□□□ -1.35
PCDH15-219ENST00000448885 ARL4CP56559 192 aa6.62□□□□□ -1.35
PCDH15-219ENST00000448885 RWDD2BP57060 319 aa6.62□□□□□ -1.35
PCDH15-219ENST00000448885 KCNA1Q09470 495 aa6.62□□□□□ -1.35
PCDH15-219ENST00000448885 KLHL38Q2WGJ6 581 aa6.62□□□□□ -1.35
PCDH15-219ENST00000448885 HABP4Q5JVS0 413 aaKnown RBP6.62□□□□□ -1.35
PCDH15-219ENST00000448885 ERICH1Q86X53 443 aa6.62□□□□□ -1.35
PCDH15-219ENST00000448885 SYT2Q8N9I0 419 aaPredicted RBP6.62□□□□□ -1.35
PCDH15-219ENST00000448885 GIMAP8Q8ND71 665 aaPredicted RBP6.62□□□□□ -1.35
PCDH15-219ENST00000448885 TSSK1BQ9BXA7 367 aa6.62□□□□□ -1.35
PCDH15-219ENST00000448885 RNF26Q9BY78 433 aaPredicted RBP6.62□□□□□ -1.35
PCDH15-219ENST00000448885 MAGEB5Q9BZ81 275 aa6.62□□□□□ -1.35
PCDH15-219ENST00000448885 NXF1Q9UBU9 619 aaKnown RBP6.62□□□□□ -1.35
PCDH15-219ENST00000448885 SUGT1Q9Y2Z0 365 aa6.62□□□□□ -1.35
PCDH15-219ENST00000448885 ZMYM3Q14202 1370 aa6.62□□□□□ -1.35
PCDH15-219ENST00000448885 COPEO14579 308 aa6.62□□□□□ -1.35
PCDH15-219ENST00000448885 PPP1R12AO14974 1030 aaPredicted RBP6.62□□□□□ -1.35
PCDH15-219ENST00000448885 CLIC2O15247 247 aa6.62□□□□□ -1.35
PCDH15-219ENST00000448885 ZNF500O60304 480 aaPredicted RBP6.62□□□□□ -1.35
PCDH15-219ENST00000448885 TADA3O75528 432 aa6.62□□□□□ -1.35
PCDH15-219ENST00000448885 CD58P19256 250 aa6.62□□□□□ -1.35
PCDH15-219ENST00000448885 GNL1P36915 607 aaPredicted RBP6.62□□□□□ -1.35
PCDH15-219ENST00000448885 ETF1P62495 437 aaKnown RBP6.62□□□□□ -1.35
PCDH15-219ENST00000448885 GRIN1Q05586 938 aa6.62□□□□□ -1.35
PCDH15-219ENST00000448885 TTC8Q8TAM2 541 aa6.62□□□□□ -1.35
PCDH15-219ENST00000448885 SLC7A5P2Q9GIP4 190 aa6.62□□□□□ -1.35
PCDH15-219ENST00000448885 MAN1B1Q9UKM7 699 aa6.62□□□□□ -1.35
PCDH15-219ENST00000448885 G3BP2Q9UN86 482 aaKnown RBP6.62□□□□□ -1.35
PCDH15-219ENST00000448885 MAP3K15Q6ZN16 1313 aa6.61□□□□□ -1.35
PCDH15-219ENST00000448885 ENC1O14682 589 aa6.61□□□□□ -1.35
PCDH15-219ENST00000448885 ATP5HO75947 161 aa6.61□□□□□ -1.35
PCDH15-219ENST00000448885 SEC31AO94979 1220 aaKnown RBP6.61□□□□□ -1.35
PCDH15-219ENST00000448885 COPS2P61201 443 aa6.61□□□□□ -1.35
PCDH15-219ENST00000448885 TSPY1Q01534 308 aa6.61□□□□□ -1.35
PCDH15-219ENST00000448885 PTH1RQ03431 593 aa6.61□□□□□ -1.35
PCDH15-219ENST00000448885 SCRN1Q12765 414 aa6.61□□□□□ -1.35
PCDH15-219ENST00000448885 RBM41Q96IZ5 413 aaKnown RBP6.61□□□□□ -1.35
PCDH15-219ENST00000448885 PARVGQ9HBI0 331 aa6.61□□□□□ -1.35
PCDH15-219ENST00000448885 RRAGDQ9NQL2 400 aaPredicted RBP6.61□□□□□ -1.35
PCDH15-219ENST00000448885 TBK1Q9UHD2 729 aa6.61□□□□□ -1.35
PCDH15-219ENST00000448885 APOBEC2Q9Y235 224 aaKnown RBP6.61□□□□□ -1.35
PCDH15-219ENST00000448885 CARMIL3Q8ND23 1372 aa6.61□□□□□ -1.35
PCDH15-219ENST00000448885 EIF3DO15371 548 aaKnown RBP eCLIP6.61□□□□□ -1.35
PCDH15-219ENST00000448885 KRT37O76014 449 aa6.61□□□□□ -1.35
PCDH15-219ENST00000448885 KCNA6P17658 529 aa6.61□□□□□ -1.35
PCDH15-219ENST00000448885 KHDRBS2Q5VWX1 349 aaKnown RBP6.61□□□□□ -1.35
PCDH15-219ENST00000448885 NDE1Q9NXR1 346 aa6.61□□□□□ -1.35
PCDH15-219ENST00000448885 SEL1LQ9UBV2 794 aa6.61□□□□□ -1.35
PCDH15-219ENST00000448885 TRPC5Q9UL62 973 aaPredicted RBP6.61□□□□□ -1.35
PCDH15-219ENST00000448885 TBX22Q9Y458 520 aa6.61□□□□□ -1.35
PCDH15-219ENST00000448885 PRPF4O43172 522 aaKnown RBP eCLIP6.61□□□□□ -1.35
PCDH15-219ENST00000448885 CTNND1O60716 968 aaKnown RBP6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms