RNA–Protein interactions for RNA: ENST00000448745.5

CPSF7-206, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CPSF7, Length 1,749 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-206ENST00000448745 NMT2O60551 498 aa9.22□□□□□ -0.93
CPSF7-206ENST00000448745 EGFRP00533 1210 aa9.22□□□□□ -0.93
CPSF7-206ENST00000448745 GNA11P29992 359 aa9.22□□□□□ -0.93
CPSF7-206ENST00000448745 ELF1P32519 619 aa9.22□□□□□ -0.93
CPSF7-206ENST00000448745 RHBDL3P58872 404 aa9.22□□□□□ -0.93
CPSF7-206ENST00000448745 ZNF280AP59817 542 aaPredicted RBP9.22□□□□□ -0.93
CPSF7-206ENST00000448745 PPP4CP60510 307 aa9.22□□□□□ -0.93
CPSF7-206ENST00000448745 PPP2R2AP63151 447 aa9.22□□□□□ -0.93
CPSF7-206ENST00000448745 HLTFQ14527 1009 aaKnown RBP eCLIP9.22□□□□□ -0.93
CPSF7-206ENST00000448745 SEPT2Q15019 361 aa9.22□□□□□ -0.93
CPSF7-206ENST00000448745 TNIP1Q15025 636 aa9.22□□□□□ -0.93
CPSF7-206ENST00000448745 ASIC2Q16515 512 aa9.22□□□□□ -0.93
CPSF7-206ENST00000448745 SLC18A3Q16572 532 aa9.22□□□□□ -0.93
CPSF7-206ENST00000448745 TMEM266Q2M3C6 531 aa9.22□□□□□ -0.93
CPSF7-206ENST00000448745 LACTB2Q53H82 288 aaPredicted RBP9.22□□□□□ -0.93
CPSF7-206ENST00000448745 RCSD1Q6JBY9 416 aa9.22□□□□□ -0.93
CPSF7-206ENST00000448745 HHIPL2Q6UWX4 724 aa9.22□□□□□ -0.93
CPSF7-206ENST00000448745 LRRC55Q6ZSA7 311 aa9.22□□□□□ -0.93
CPSF7-206ENST00000448745 NEK8Q86SG6 692 aa9.22□□□□□ -0.93
CPSF7-206ENST00000448745 DZIP1Q86YF9 867 aaKnown RBP9.22□□□□□ -0.93
CPSF7-206ENST00000448745 PARP9Q8IXQ6 854 aa9.22□□□□□ -0.93
CPSF7-206ENST00000448745 CACNA2D3Q8IZS8 1091 aa9.22□□□□□ -0.93
CPSF7-206ENST00000448745 GPC2Q8N158 579 aa9.22□□□□□ -0.93
CPSF7-206ENST00000448745 ANKRD13CQ8N6S4 541 aa9.22□□□□□ -0.93
CPSF7-206ENST00000448745 PNMA1Q8ND90 353 aa9.22□□□□□ -0.93
CPSF7-206ENST00000448745 CEP63Q96MT8 703 aa9.22□□□□□ -0.93
CPSF7-206ENST00000448745 LSM14BQ9BX40 385 aaKnown RBP9.22□□□□□ -0.93
CPSF7-206ENST00000448745 RAB34Q9BZG1 259 aa9.22□□□□□ -0.93
CPSF7-206ENST00000448745 TANGO6Q9C0B7 1094 aa9.22□□□□□ -0.93
CPSF7-206ENST00000448745 CNOT10Q9H9A5 744 aaKnown RBP9.22□□□□□ -0.93
CPSF7-206ENST00000448745 DCP1AQ9NPI6 582 aaPredicted RBP9.22□□□□□ -0.93
CPSF7-206ENST00000448745 SWAP70Q9UH65 585 aa9.22□□□□□ -0.93
CPSF7-206ENST00000448745 ESYT3A0FGR9 886 aa9.21□□□□□ -0.94
CPSF7-206ENST00000448745 TRAPPC3O43617 180 aa9.21□□□□□ -0.94
CPSF7-206ENST00000448745 CCNT1O60563 726 aaKnown RBP9.21□□□□□ -0.94
CPSF7-206ENST00000448745 DDNO94850 711 aaPredicted RBP9.21□□□□□ -0.94
CPSF7-206ENST00000448745 FTCDO95954 541 aa9.21□□□□□ -0.94
CPSF7-206ENST00000448745 EZRP15311 586 aaKnown RBP9.21□□□□□ -0.94
CPSF7-206ENST00000448745 VEGFAP15692 232 aaPredicted RBP9.21□□□□□ -0.94
CPSF7-206ENST00000448745 RPS12P25398 132 aaKnown RBP9.21□□□□□ -0.94
CPSF7-206ENST00000448745 ANXA13P27216 316 aa9.21□□□□□ -0.94
CPSF7-206ENST00000448745 SLC8A1P32418 973 aa9.21□□□□□ -0.94
CPSF7-206ENST00000448745 HPDP32754 393 aaPredicted RBP9.21□□□□□ -0.94
CPSF7-206ENST00000448745 HSD17B3P37058 310 aa9.21□□□□□ -0.94
CPSF7-206ENST00000448745 GMPSP49915 693 aaPredicted RBP9.21□□□□□ -0.94
CPSF7-206ENST00000448745 SEC24CP53992 1094 aa9.21□□□□□ -0.94
CPSF7-206ENST00000448745 EIF6P56537 245 aaKnown RBP9.21□□□□□ -0.94
CPSF7-206ENST00000448745 ANKRD20A8PQ5CZ79 823 aa9.21□□□□□ -0.94
CPSF7-206ENST00000448745 SPDYCQ5MJ68 293 aa9.21□□□□□ -0.94
CPSF7-206ENST00000448745 STAG2Q8N3U4 1231 aa9.21□□□□□ -0.94
CPSF7-206ENST00000448745 ZDHHC15Q96MV8 337 aa9.21□□□□□ -0.94
CPSF7-206ENST00000448745 ZMYND12Q9H0C1 365 aa9.21□□□□□ -0.94
CPSF7-206ENST00000448745 CD248Q9HCU0 757 aa9.21□□□□□ -0.94
CPSF7-206ENST00000448745 PPANQ9NQ55 473 aaKnown RBP9.21□□□□□ -0.94
CPSF7-206ENST00000448745 MAD2L2Q9UI95 211 aa9.21□□□□□ -0.94
CPSF7-206ENST00000448745 TMEM59LQ9UK28 342 aa9.21□□□□□ -0.94
CPSF7-206ENST00000448745 SERPINA10Q9UK55 444 aa9.21□□□□□ -0.94
CPSF7-206ENST00000448745 COL4A3BPQ9Y5P4 624 aa9.21□□□□□ -0.94
CPSF7-206ENST00000448745 DDX60LQ5H9U9 1706 aaKnown RBP9.21□□□□□ -0.94
CPSF7-206ENST00000448745 ROBO3Q96MS0 1386 aa9.2□□□□□ -0.94
CPSF7-206ENST00000448745 BHMG1C9JSJ3 638 aaPredicted RBP9.2□□□□□ -0.94
CPSF7-206ENST00000448745 DNAJC8O75937 253 aaPredicted RBP9.2□□□□□ -0.94
CPSF7-206ENST00000448745 USP17L8P0C7I0 530 aa9.2□□□□□ -0.94
CPSF7-206ENST00000448745 CTNNA1P35221 906 aaKnown RBP9.2□□□□□ -0.94
CPSF7-206ENST00000448745 CRKP46108 304 aa9.2□□□□□ -0.94
CPSF7-206ENST00000448745 FXR2P51116 673 aaKnown RBP eCLIP9.2□□□□□ -0.94
CPSF7-206ENST00000448745 NAPAP54920 295 aa9.2□□□□□ -0.94
CPSF7-206ENST00000448745 ERVK-9P63128 1117 aa9.2□□□□□ -0.94
CPSF7-206ENST00000448745 FKBP3Q00688 224 aaKnown RBP9.2□□□□□ -0.94
CPSF7-206ENST00000448745 ZNF844Q08AG5 666 aa9.2□□□□□ -0.94
CPSF7-206ENST00000448745 LETM2Q2VYF4 491 aa9.2□□□□□ -0.94
CPSF7-206ENST00000448745 GKAP1Q5VSY0 366 aaPredicted RBP9.2□□□□□ -0.94
CPSF7-206ENST00000448745 KLHL7Q8IXQ5 586 aa9.2□□□□□ -0.94
CPSF7-206ENST00000448745 MYOCDQ8IZQ8 938 aa9.2□□□□□ -0.94
CPSF7-206ENST00000448745 MTMR14Q8NCE2 650 aa9.2□□□□□ -0.94
CPSF7-206ENST00000448745 ACTRT1Q8TDG2 376 aa9.2□□□□□ -0.94
CPSF7-206ENST00000448745 LARP4BQ92615 738 aaKnown RBP9.2□□□□□ -0.94
CPSF7-206ENST00000448745 RAD54LQ92698 747 aa9.2□□□□□ -0.94
CPSF7-206ENST00000448745 EEF2KMTQ96G04 330 aa9.2□□□□□ -0.94
CPSF7-206ENST00000448745 SGSM3Q96HU1 749 aa9.2□□□□□ -0.94
CPSF7-206ENST00000448745 L3MBTL3Q96JM7 780 aaPredicted RBP9.2□□□□□ -0.94
CPSF7-206ENST00000448745 PRMT6Q96LA8 375 aaPredicted RBP9.2□□□□□ -0.94
CPSF7-206ENST00000448745 SPZ1Q9BXG8 430 aa9.2□□□□□ -0.94
CPSF7-206ENST00000448745 KDM4CQ9H3R0 1056 aa9.2□□□□□ -0.94
CPSF7-206ENST00000448745 CENPHQ9H3R5 247 aa9.2□□□□□ -0.94
CPSF7-206ENST00000448745 SLITRK6Q9H5Y7 841 aa9.2□□□□□ -0.94
CPSF7-206ENST00000448745 VEZTQ9HBM0 779 aa9.2□□□□□ -0.94
CPSF7-206ENST00000448745 DDX20Q9UHI6 824 aaKnown RBP9.2□□□□□ -0.94
CPSF7-206ENST00000448745 ODF2LQ9ULJ1 636 aa9.2□□□□□ -0.94
CPSF7-206ENST00000448745 SUFUQ9UMX1 484 aa9.2□□□□□ -0.94
CPSF7-206ENST00000448745 PALM3A6NDB9 673 aaPredicted RBP9.19□□□□□ -0.94
CPSF7-206ENST00000448745 ZSCAN5CA6NGD5 496 aaPredicted RBP9.19□□□□□ -0.94
CPSF7-206ENST00000448745 MYMKA6NI61 221 aa9.19□□□□□ -0.94
CPSF7-206ENST00000448745 POTECB2RU33 542 aa9.19□□□□□ -0.94
CPSF7-206ENST00000448745 H0YGN5 161 aa9.19□□□□□ -0.94
CPSF7-206ENST00000448745 hCG_1984214I3L0E3 225 aa9.19□□□□□ -0.94
CPSF7-206ENST00000448745 PGRMC1O00264 195 aaKnown RBP9.19□□□□□ -0.94
CPSF7-206ENST00000448745 KIF4AO95239 1232 aa9.19□□□□□ -0.94
CPSF7-206ENST00000448745 CYP2D6P10635 497 aa9.19□□□□□ -0.94
CPSF7-206ENST00000448745 KLRC1P26715 233 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms