RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 SPRYD3Q8NCJ5 442 aa15.76■□□□□ 0.11
GTF3C3-206ENST00000448539 TMEM60Q9H2L4 133 aa15.76■□□□□ 0.11
GTF3C3-206ENST00000448539 TUBE1Q9UJT0 475 aa15.76■□□□□ 0.11
GTF3C3-206ENST00000448539 CEP131Q9UPN4 1083 aa15.76■□□□□ 0.11
GTF3C3-206ENST00000448539 EML1O00423 815 aa15.75■□□□□ 0.11
GTF3C3-206ENST00000448539 STX6O43752 255 aa15.75■□□□□ 0.11
GTF3C3-206ENST00000448539 OATP04181 439 aa15.75■□□□□ 0.11
GTF3C3-206ENST00000448539 P4HBP07237 508 aaKnown RBP15.75■□□□□ 0.11
GTF3C3-206ENST00000448539 PDIA4P13667 645 aaKnown RBP15.75■□□□□ 0.11
GTF3C3-206ENST00000448539 TOB1P50616 345 aaPredicted RBP15.75■□□□□ 0.11
GTF3C3-206ENST00000448539 HIC1Q14526 733 aa15.75■□□□□ 0.11
GTF3C3-206ENST00000448539 TAF2Q6P1X5 1199 aa15.75■□□□□ 0.11
GTF3C3-206ENST00000448539 RSPH3Q86UC2 560 aa15.75■□□□□ 0.11
GTF3C3-206ENST00000448539 FERMT3Q86UX7 667 aa15.75■□□□□ 0.11
GTF3C3-206ENST00000448539 LRCH3Q96II8 777 aa15.75■□□□□ 0.11
GTF3C3-206ENST00000448539 CTAGE1Q96RT6 745 aa15.75■□□□□ 0.11
GTF3C3-206ENST00000448539 PCDHB6Q9Y5E3 794 aa15.75■□□□□ 0.11
GTF3C3-206ENST00000448539 UMODL1Q5DID0 1318 aa15.74■□□□□ 0.11
GTF3C3-206ENST00000448539 LAD1O00515 517 aa15.74■□□□□ 0.11
GTF3C3-206ENST00000448539 CKBP12277 381 aa15.74■□□□□ 0.11
GTF3C3-206ENST00000448539 SELPP16109 830 aa15.74■□□□□ 0.11
GTF3C3-206ENST00000448539 ATP4AP20648 1035 aa15.74■□□□□ 0.11
GTF3C3-206ENST00000448539 THPOP40225 353 aa15.74■□□□□ 0.11
GTF3C3-206ENST00000448539 QARSP47897 775 aaKnown RBP15.74■□□□□ 0.11
GTF3C3-206ENST00000448539 PRKCEQ02156 737 aa15.74■□□□□ 0.11
GTF3C3-206ENST00000448539 PTGDRQ13258 359 aa15.74■□□□□ 0.11
GTF3C3-206ENST00000448539 UGCGQ16739 394 aa15.74■□□□□ 0.11
GTF3C3-206ENST00000448539 LRRC8DQ7L1W4 858 aa15.74■□□□□ 0.11
GTF3C3-206ENST00000448539 RPUSD2Q8IZ73 545 aaKnown RBP15.74■□□□□ 0.11
GTF3C3-206ENST00000448539 BANK1Q8NDB2 785 aa15.74■□□□□ 0.11
GTF3C3-206ENST00000448539 DHX38Q92620 1227 aaKnown RBP15.74■□□□□ 0.11
GTF3C3-206ENST00000448539 RAB34Q9BZG1 259 aa15.74■□□□□ 0.11
GTF3C3-206ENST00000448539 COL1A2P08123 1366 aa15.74■□□□□ 0.11
GTF3C3-206ENST00000448539 MBLAC1A4D2B0 266 aaPredicted RBP15.73■□□□□ 0.11
GTF3C3-206ENST00000448539 DDX11L8A8MPP1 907 aa15.73■□□□□ 0.11
GTF3C3-206ENST00000448539 ZNF862O60290 1169 aa15.73■□□□□ 0.11
GTF3C3-206ENST00000448539 CAND2O75155 1236 aa15.73■□□□□ 0.11
GTF3C3-206ENST00000448539 PARNO95453 639 aaKnown RBP15.73■□□□□ 0.11
GTF3C3-206ENST00000448539 RPLP2P05387 115 aaKnown RBP15.73■□□□□ 0.11
GTF3C3-206ENST00000448539 CSF2RAP15509 400 aa15.73■□□□□ 0.11
GTF3C3-206ENST00000448539 RFC2P35250 354 aa15.73■□□□□ 0.11
GTF3C3-206ENST00000448539 TECP42680 631 aa15.73■□□□□ 0.11
GTF3C3-206ENST00000448539 ADAM17P78536 824 aa15.73■□□□□ 0.11
GTF3C3-206ENST00000448539 SPIRE1Q08AE8 756 aa15.73■□□□□ 0.11
GTF3C3-206ENST00000448539 XKR3Q5GH77 459 aa15.73■□□□□ 0.11
GTF3C3-206ENST00000448539 ERMNQ8TAM6 284 aa15.73■□□□□ 0.11
GTF3C3-206ENST00000448539 NEK9Q8TD19 979 aa15.73■□□□□ 0.11
GTF3C3-206ENST00000448539 TRAPPC12Q8WVT3 735 aa15.73■□□□□ 0.11
GTF3C3-206ENST00000448539 SCLYQ96I15 445 aa15.73■□□□□ 0.11
GTF3C3-206ENST00000448539 WNT8AQ9H1J5 351 aa15.73■□□□□ 0.11
GTF3C3-206ENST00000448539 ZSCAN16Q9H4T2 348 aaPredicted RBP15.73■□□□□ 0.11
GTF3C3-206ENST00000448539 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.73■□□□□ 0.11
GTF3C3-206ENST00000448539 SEPT9Q9UHD8 586 aaPredicted RBP15.73■□□□□ 0.11
GTF3C3-206ENST00000448539 BMP15O95972 392 aa15.72■□□□□ 0.11
GTF3C3-206ENST00000448539 IQCF3P0C7M6 154 aa15.72■□□□□ 0.11
GTF3C3-206ENST00000448539 KLRC1P26715 233 aa15.72■□□□□ 0.11
GTF3C3-206ENST00000448539 RBL2Q08999 1139 aa15.72■□□□□ 0.11
GTF3C3-206ENST00000448539 MARCH8Q5T0T0 291 aa15.72■□□□□ 0.11
GTF3C3-206ENST00000448539 ZNF618Q5T7W0 954 aa15.72■□□□□ 0.11
GTF3C3-206ENST00000448539 MTHFD1LQ6UB35 978 aa15.72■□□□□ 0.11
GTF3C3-206ENST00000448539 RUFY4Q6ZNE9 571 aa15.72■□□□□ 0.11
GTF3C3-206ENST00000448539 TPH2Q8IWU9 490 aa15.72■□□□□ 0.11
GTF3C3-206ENST00000448539 DYDC2Q96IM9 177 aa15.72■□□□□ 0.11
GTF3C3-206ENST00000448539 EIF2AK1Q9BQI3 630 aaKnown RBP15.72■□□□□ 0.11
GTF3C3-206ENST00000448539 LXNQ9BS40 222 aa15.72■□□□□ 0.11
GTF3C3-206ENST00000448539 FTOQ9C0B1 505 aaKnown RBP eCLIP15.72■□□□□ 0.11
GTF3C3-206ENST00000448539 ZSWIM4Q9H7M6 989 aa15.72■□□□□ 0.11
GTF3C3-206ENST00000448539 IL23AQ9NPF7 189 aa15.72■□□□□ 0.11
GTF3C3-206ENST00000448539 MTMR6Q9Y217 621 aa15.72■□□□□ 0.11
GTF3C3-206ENST00000448539 PCDHA2Q9Y5H9 948 aa15.72■□□□□ 0.11
GTF3C3-206ENST00000448539 POTEMA6NI47 508 aa15.71■□□□□ 0.11
GTF3C3-206ENST00000448539 RSPH10B2B2RC85 870 aa15.71■□□□□ 0.11
GTF3C3-206ENST00000448539 M0QZ92 97 aa15.71■□□□□ 0.11
GTF3C3-206ENST00000448539 MAGEB2O15479 319 aa15.71■□□□□ 0.11
GTF3C3-206ENST00000448539 PFKMP08237 780 aa15.71■□□□□ 0.11
GTF3C3-206ENST00000448539 RSPH10BP0C881 870 aa15.71■□□□□ 0.11
GTF3C3-206ENST00000448539 PRPHP41219 470 aa15.71■□□□□ 0.11
GTF3C3-206ENST00000448539 CYP4A11Q02928 519 aa15.71■□□□□ 0.11
GTF3C3-206ENST00000448539 RESTQ13127 1097 aa15.71■□□□□ 0.11
GTF3C3-206ENST00000448539 CTTNQ14247 550 aaKnown RBP15.71■□□□□ 0.11
GTF3C3-206ENST00000448539 TRIM71Q2Q1W2 868 aaKnown RBP15.71■□□□□ 0.11
GTF3C3-206ENST00000448539 MTERF2Q49AM1 385 aa15.71■□□□□ 0.11
GTF3C3-206ENST00000448539 DTHD1Q6ZMT9 781 aa15.71■□□□□ 0.11
GTF3C3-206ENST00000448539 OTUD6AQ7L8S5 288 aa15.71■□□□□ 0.11
GTF3C3-206ENST00000448539 DEFB128Q7Z7B8 93 aa15.71■□□□□ 0.11
GTF3C3-206ENST00000448539 C4orf19Q8IY42 314 aa15.71■□□□□ 0.11
GTF3C3-206ENST00000448539 TDHQ8IZJ6 230 aa15.71■□□□□ 0.11
GTF3C3-206ENST00000448539 C4orf32Q8N8J7 132 aa15.71■□□□□ 0.11
GTF3C3-206ENST00000448539 DNAJB3Q8WWF6 145 aa15.71■□□□□ 0.11
GTF3C3-206ENST00000448539 WNT8BQ93098 351 aa15.71■□□□□ 0.11
GTF3C3-206ENST00000448539 FAM49AQ9H0Q0 323 aaPredicted RBP15.71■□□□□ 0.11
GTF3C3-206ENST00000448539 RGL1Q9NZL6 768 aa15.71■□□□□ 0.11
GTF3C3-206ENST00000448539 STK24Q9Y6E0 443 aa15.71■□□□□ 0.11
GTF3C3-206ENST00000448539 SMIM35A0A1B0GVV1 85 aa15.7■□□□□ 0.1
GTF3C3-206ENST00000448539 CTSHP09668 335 aa15.7■□□□□ 0.1
GTF3C3-206ENST00000448539 ACRP10323 421 aa15.7■□□□□ 0.1
GTF3C3-206ENST00000448539 TMOD1P28289 359 aa15.7■□□□□ 0.1
GTF3C3-206ENST00000448539 FXR2P51116 673 aaKnown RBP eCLIP15.7■□□□□ 0.1
GTF3C3-206ENST00000448539 ATP2C1P98194 919 aaPredicted RBP15.7■□□□□ 0.1
GTF3C3-206ENST00000448539 TBC1D8BQ0IIM8 1120 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms