RNA–Protein interactions for RNA: ENST00000448141.6

CCHCR1-206, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-206ENST00000448141 MBLAC1A4D2B0 266 aaPredicted RBP23.13■■□□□ 1.29
CCHCR1-206ENST00000448141 EML1O00423 815 aa23.13■■□□□ 1.29
CCHCR1-206ENST00000448141 ZNF862O60290 1169 aa23.13■■□□□ 1.29
CCHCR1-206ENST00000448141 RFC2P35250 354 aa23.13■■□□□ 1.29
CCHCR1-206ENST00000448141 ZNF174Q15697 407 aa23.13■■□□□ 1.29
CCHCR1-206ENST00000448141 TTC38Q5R3I4 469 aa23.13■■□□□ 1.29
CCHCR1-206ENST00000448141 TMEM240Q5SV17 173 aa23.13■■□□□ 1.29
CCHCR1-206ENST00000448141 PSRC1Q6PGN9 363 aaPredicted RBP23.13■■□□□ 1.29
CCHCR1-206ENST00000448141 ZNF365Q70YC5 407 aa23.13■■□□□ 1.29
CCHCR1-206ENST00000448141 RPUSD2Q8IZ73 545 aaKnown RBP23.13■■□□□ 1.29
CCHCR1-206ENST00000448141 VWCEQ96DN2 955 aa23.13■■□□□ 1.29
CCHCR1-206ENST00000448141 TMEM60Q9H2L4 133 aa23.13■■□□□ 1.29
CCHCR1-206ENST00000448141 FOXD4L1Q9NU39 408 aa23.13■■□□□ 1.29
CCHCR1-206ENST00000448141 TRAPPC10P48553 1259 aa23.12■■□□□ 1.29
CCHCR1-206ENST00000448141 NBR1Q14596 966 aa23.12■■□□□ 1.29
CCHCR1-206ENST00000448141 NCAPH2Q6IBW4 605 aa23.12■■□□□ 1.29
CCHCR1-206ENST00000448141 TRAF7Q6Q0C0 670 aa23.12■■□□□ 1.29
CCHCR1-206ENST00000448141 HSCBQ8IWL3 235 aa23.12■■□□□ 1.29
CCHCR1-206ENST00000448141 BBXQ8WY36 941 aaPredicted RBP23.12■■□□□ 1.29
CCHCR1-206ENST00000448141 INTS4Q96HW7 963 aaKnown RBP23.12■■□□□ 1.29
CCHCR1-206ENST00000448141 FAM167AQ96KS9 214 aa23.12■■□□□ 1.29
CCHCR1-206ENST00000448141 RNPC3Q96LT9 517 aaKnown RBP23.12■■□□□ 1.29
CCHCR1-206ENST00000448141 MTMR9Q96QG7 549 aa23.12■■□□□ 1.29
CCHCR1-206ENST00000448141 COL1A2P08123 1366 aa23.12■■□□□ 1.29
CCHCR1-206ENST00000448141 ZBTB42B2RXF5 422 aa23.11■■□□□ 1.29
CCHCR1-206ENST00000448141 FGBP02675 491 aa23.11■■□□□ 1.29
CCHCR1-206ENST00000448141 OATP04181 439 aa23.11■■□□□ 1.29
CCHCR1-206ENST00000448141 CTSHP09668 335 aa23.11■■□□□ 1.29
CCHCR1-206ENST00000448141 TXKP42681 527 aa23.11■■□□□ 1.29
CCHCR1-206ENST00000448141 PRKCEQ02156 737 aa23.11■■□□□ 1.29
CCHCR1-206ENST00000448141 SPIRE1Q08AE8 756 aa23.11■■□□□ 1.29
CCHCR1-206ENST00000448141 ZNF484Q5JVG2 852 aa23.11■■□□□ 1.29
CCHCR1-206ENST00000448141 TAF2Q6P1X5 1199 aa23.11■■□□□ 1.29
CCHCR1-206ENST00000448141 BANK1Q8NDB2 785 aa23.11■■□□□ 1.29
CCHCR1-206ENST00000448141 TTC12Q9H892 705 aaPredicted RBP23.11■■□□□ 1.29
CCHCR1-206ENST00000448141 PCDHA12Q9UN75 941 aa23.11■■□□□ 1.29
CCHCR1-206ENST00000448141 RSPH10B2B2RC85 870 aa23.1■■□□□ 1.29
CCHCR1-206ENST00000448141 CAND2O75155 1236 aa23.1■■□□□ 1.29
CCHCR1-206ENST00000448141 RSPH10BP0C881 870 aa23.1■■□□□ 1.29
CCHCR1-206ENST00000448141 TOB1P50616 345 aaPredicted RBP23.1■■□□□ 1.29
CCHCR1-206ENST00000448141 ORC2Q13416 577 aaPredicted RBP23.1■■□□□ 1.29
CCHCR1-206ENST00000448141 GPNMBQ14956 572 aa23.1■■□□□ 1.29
CCHCR1-206ENST00000448141 MTHFD1LQ6UB35 978 aa23.1■■□□□ 1.29
CCHCR1-206ENST00000448141 FTOQ9C0B1 505 aaKnown RBP eCLIP23.1■■□□□ 1.29
CCHCR1-206ENST00000448141 FAM49AQ9H0Q0 323 aaPredicted RBP23.1■■□□□ 1.29
CCHCR1-206ENST00000448141 PCDHA2Q9Y5H9 948 aa23.1■■□□□ 1.29
CCHCR1-206ENST00000448141 SIP14410 1827 aa23.1■■□□□ 1.29
CCHCR1-206ENST00000448141 RBAK-RBAKDNI3L0D1 243 aa23.09■■□□□ 1.29
CCHCR1-206ENST00000448141 PFKMP08237 780 aa23.09■■□□□ 1.29
CCHCR1-206ENST00000448141 PDCP20941 246 aa23.09■■□□□ 1.29
CCHCR1-206ENST00000448141 KLRC1P26715 233 aa23.09■■□□□ 1.29
CCHCR1-206ENST00000448141 MBTPS1Q14703 1052 aa23.09■■□□□ 1.29
CCHCR1-206ENST00000448141 LRIT3Q3SXY7 679 aa23.09■■□□□ 1.29
CCHCR1-206ENST00000448141 OTOP2Q7RTS6 562 aa23.09■■□□□ 1.29
CCHCR1-206ENST00000448141 DNAJB3Q8WWF6 145 aa23.09■■□□□ 1.29
CCHCR1-206ENST00000448141 NRBP2Q9NSY0 501 aa23.09■■□□□ 1.29
CCHCR1-206ENST00000448141 TET1Q8NFU7 2136 aa23.09■■□□□ 1.29
CCHCR1-206ENST00000448141 EVPLQ92817 2033 aa23.08■■□□□ 1.29
CCHCR1-206ENST00000448141 VPS37CA5D8V6 355 aaPredicted RBP23.08■■□□□ 1.29
CCHCR1-206ENST00000448141 SOX1O00570 391 aaPredicted RBP23.08■■□□□ 1.29
CCHCR1-206ENST00000448141 NBNO60934 754 aa23.08■■□□□ 1.29
CCHCR1-206ENST00000448141 PARNO95453 639 aaKnown RBP23.08■■□□□ 1.29
CCHCR1-206ENST00000448141 PSMC5P62195 406 aa23.08■■□□□ 1.29
CCHCR1-206ENST00000448141 EPHA7Q15375 998 aa23.08■■□□□ 1.29
CCHCR1-206ENST00000448141 RSPH3Q86UC2 560 aa23.08■■□□□ 1.29
CCHCR1-206ENST00000448141 PCDHB6Q9Y5E3 794 aa23.08■■□□□ 1.29
CCHCR1-206ENST00000448141 OR52Z1P0C646 297 aa23.07■■□□□ 1.28
CCHCR1-206ENST00000448141 QARSP47897 775 aaKnown RBP23.07■■□□□ 1.28
CCHCR1-206ENST00000448141 FXR1P51114 621 aaKnown RBP eCLIP23.07■■□□□ 1.28
CCHCR1-206ENST00000448141 XKR3Q5GH77 459 aa23.07■■□□□ 1.28
CCHCR1-206ENST00000448141 RPAINQ86UA6 219 aa23.07■■□□□ 1.28
CCHCR1-206ENST00000448141 HERVK_113Q902F9 699 aa23.07■■□□□ 1.28
CCHCR1-206ENST00000448141 RGL1Q9NZL6 768 aa23.07■■□□□ 1.28
CCHCR1-206ENST00000448141 SEPT9Q9UHD8 586 aaPredicted RBP23.07■■□□□ 1.28
CCHCR1-206ENST00000448141 CEP131Q9UPN4 1083 aa23.07■■□□□ 1.28
CCHCR1-206ENST00000448141 SMIM35A0A1B0GVV1 85 aa23.06■■□□□ 1.28
CCHCR1-206ENST00000448141 TMEM150BA6NC51 233 aa23.06■■□□□ 1.28
CCHCR1-206ENST00000448141 DDX11L8A8MPP1 907 aa23.06■■□□□ 1.28
CCHCR1-206ENST00000448141 STBD1O95210 358 aa23.06■■□□□ 1.28
CCHCR1-206ENST00000448141 C22orf31O95567 290 aa23.06■■□□□ 1.28
CCHCR1-206ENST00000448141 CXCL10P02778 98 aa23.06■■□□□ 1.28
CCHCR1-206ENST00000448141 P4HBP07237 508 aaKnown RBP23.06■■□□□ 1.28
CCHCR1-206ENST00000448141 RILPL1Q5EBL4 403 aa23.06■■□□□ 1.28
CCHCR1-206ENST00000448141 FAM26DQ5JW98 314 aa23.06■■□□□ 1.28
CCHCR1-206ENST00000448141 RASIP1Q5U651 963 aa23.06■■□□□ 1.28
CCHCR1-206ENST00000448141 DYDC2Q96IM9 177 aa23.06■■□□□ 1.28
CCHCR1-206ENST00000448141 CXXC1Q9P0U4 656 aaPredicted RBP23.06■■□□□ 1.28
CCHCR1-206ENST00000448141 POTEMA6NI47 508 aa23.05■■□□□ 1.28
CCHCR1-206ENST00000448141 CHRNA1P02708 482 aa23.05■■□□□ 1.28
CCHCR1-206ENST00000448141 ACTN1P12814 892 aa23.05■■□□□ 1.28
CCHCR1-206ENST00000448141 SYT1P21579 422 aa23.05■■□□□ 1.28
CCHCR1-206ENST00000448141 MRPS6P82932 125 aaKnown RBP23.05■■□□□ 1.28
CCHCR1-206ENST00000448141 CYP4A11Q02928 519 aa23.05■■□□□ 1.28
CCHCR1-206ENST00000448141 TMEM62Q0P6H9 643 aa23.05■■□□□ 1.28
CCHCR1-206ENST00000448141 C4orf32Q8N8J7 132 aa23.05■■□□□ 1.28
CCHCR1-206ENST00000448141 LRCH3Q96II8 777 aa23.05■■□□□ 1.28
CCHCR1-206ENST00000448141 EIF2AK1Q9BQI3 630 aaKnown RBP23.05■■□□□ 1.28
CCHCR1-206ENST00000448141 LXNQ9BS40 222 aa23.05■■□□□ 1.28
CCHCR1-206ENST00000448141 MTIF3Q9H2K0 278 aaKnown RBP23.05■■□□□ 1.28
CCHCR1-206ENST00000448141 WRAP73Q9P2S5 460 aaPredicted RBP23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms