RNA–Protein interactions for RNA: ENST00000448078.1

USP49-205, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 3

Gene USP49, Length 480 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-205ENST00000448078 PRAMEF1O95521 474 aa7.44□□□□□ -1.22
USP49-205ENST00000448078 GJA8P48165 433 aa7.44□□□□□ -1.22
USP49-205ENST00000448078 CRHR2Q13324 411 aa7.44□□□□□ -1.22
USP49-205ENST00000448078 AUHQ13825 339 aaKnown RBP7.44□□□□□ -1.22
USP49-205ENST00000448078 DLGAP5Q15398 846 aa7.44□□□□□ -1.22
USP49-205ENST00000448078 TMEM67Q5HYA8 995 aa7.44□□□□□ -1.22
USP49-205ENST00000448078 STRIP1Q5VSL9 837 aa7.44□□□□□ -1.22
USP49-205ENST00000448078 ADAT2Q7Z6V5 191 aaKnown RBP7.44□□□□□ -1.22
USP49-205ENST00000448078 ZSWIM9Q86XI8 627 aa7.44□□□□□ -1.22
USP49-205ENST00000448078 ANKRD18AQ8IVF6 992 aa7.44□□□□□ -1.22
USP49-205ENST00000448078 ANKRD13AQ8IZ07 590 aa7.44□□□□□ -1.22
USP49-205ENST00000448078 OXR1Q8N573 874 aa7.44□□□□□ -1.22
USP49-205ENST00000448078 RASGRP4Q8TDF6 673 aa7.44□□□□□ -1.22
USP49-205ENST00000448078 SYTL5Q8TDW5 730 aaPredicted RBP7.44□□□□□ -1.22
USP49-205ENST00000448078 FAM89AQ96GI7 184 aa7.44□□□□□ -1.22
USP49-205ENST00000448078 SEC16BQ96JE7 1060 aa7.44□□□□□ -1.22
USP49-205ENST00000448078 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.44□□□□□ -1.22
USP49-205ENST00000448078 FOXP3Q9BZS1 431 aa7.44□□□□□ -1.22
USP49-205ENST00000448078 DEFB129Q9H1M3 183 aa7.44□□□□□ -1.22
USP49-205ENST00000448078 ADAMTS10Q9H324 1103 aa7.44□□□□□ -1.22
USP49-205ENST00000448078 R3HDMLQ9H3Y0 253 aa7.44□□□□□ -1.22
USP49-205ENST00000448078 TCFL5Q9UL49 500 aa7.44□□□□□ -1.22
USP49-205ENST00000448078 CTNND2Q9UQB3 1225 aa7.44□□□□□ -1.22
USP49-205ENST00000448078 PPP2R3BQ9Y5P8 575 aa7.44□□□□□ -1.22
USP49-205ENST00000448078 XDHP47989 1333 aa7.44□□□□□ -1.22
USP49-205ENST00000448078 CLSPNQ9HAW4 1339 aa7.44□□□□□ -1.22
USP49-205ENST00000448078 RTL9Q8NET4 1388 aa7.44□□□□□ -1.22
USP49-205ENST00000448078 WNT10BO00744 389 aa7.43□□□□□ -1.22
USP49-205ENST00000448078 SIGLEC6O43699 453 aa7.43□□□□□ -1.22
USP49-205ENST00000448078 ACRP10323 421 aa7.43□□□□□ -1.22
USP49-205ENST00000448078 GDNFP39905 211 aa7.43□□□□□ -1.22
USP49-205ENST00000448078 GTF2A2P52657 109 aa7.43□□□□□ -1.22
USP49-205ENST00000448078 PMS1P54277 932 aaKnown RBP7.43□□□□□ -1.22
USP49-205ENST00000448078 LMOD3Q0VAK6 560 aa7.43□□□□□ -1.22
USP49-205ENST00000448078 TCEAL1Q15170 157 aa7.43□□□□□ -1.22
USP49-205ENST00000448078 TTLL5Q6EMB2 1281 aa7.43□□□□□ -1.22
USP49-205ENST00000448078 ZNF655Q8N720 491 aaPredicted RBP7.43□□□□□ -1.22
USP49-205ENST00000448078 DAGLBQ8NCG7 672 aa7.43□□□□□ -1.22
USP49-205ENST00000448078 PLBD2Q8NHP8 589 aa7.43□□□□□ -1.22
USP49-205ENST00000448078 ABHD4Q8TB40 342 aa7.43□□□□□ -1.22
USP49-205ENST00000448078 MYLIPQ8WY64 445 aa7.43□□□□□ -1.22
USP49-205ENST00000448078 TCTN2Q96GX1 697 aa7.43□□□□□ -1.22
USP49-205ENST00000448078 WNK4Q96J92 1243 aa7.43□□□□□ -1.22
USP49-205ENST00000448078 GMLQ99445 158 aa7.43□□□□□ -1.22
USP49-205ENST00000448078 CDC5LQ99459 802 aaKnown RBP7.43□□□□□ -1.22
USP49-205ENST00000448078 CDADC1Q9BWV3 514 aa7.43□□□□□ -1.22
USP49-205ENST00000448078 COA1Q9GZY4 146 aa7.43□□□□□ -1.22
USP49-205ENST00000448078 STRIP2Q9ULQ0 834 aa7.43□□□□□ -1.22
USP49-205ENST00000448078 R3HCC1Q9Y3T6 440 aaKnown RBP7.43□□□□□ -1.22
USP49-205ENST00000448078 MRVI1Q9Y6F6 885 aa7.43□□□□□ -1.22
USP49-205ENST00000448078 POLR2AP24928 1970 aaKnown RBP7.42□□□□□ -1.22
USP49-205ENST00000448078 PAPPA2Q9BXP8 1791 aa7.42□□□□□ -1.22
USP49-205ENST00000448078 PAPLNO95428 1278 aa7.42□□□□□ -1.22
USP49-205ENST00000448078 SRFP11831 508 aa7.42□□□□□ -1.22
USP49-205ENST00000448078 DNAJA1P31689 397 aaKnown RBP7.42□□□□□ -1.22
USP49-205ENST00000448078 UBXN2AP68543 259 aa7.42□□□□□ -1.22
USP49-205ENST00000448078 TNFAIP1Q13829 316 aa7.42□□□□□ -1.22
USP49-205ENST00000448078 SLC14A2Q15849 920 aa7.42□□□□□ -1.22
USP49-205ENST00000448078 ZYXQ15942 572 aaKnown RBP7.42□□□□□ -1.22
USP49-205ENST00000448078 NFE2L2Q16236 605 aa7.42□□□□□ -1.22
USP49-205ENST00000448078 GAB4Q2WGN9 574 aa7.42□□□□□ -1.22
USP49-205ENST00000448078 DCAF15Q66K64 600 aa7.42□□□□□ -1.22
USP49-205ENST00000448078 RNF111Q6ZNA4 994 aa7.42□□□□□ -1.22
USP49-205ENST00000448078 C7orf61Q8IZ16 206 aa7.42□□□□□ -1.22
USP49-205ENST00000448078 TAB3Q8N5C8 712 aaPredicted RBP7.42□□□□□ -1.22
USP49-205ENST00000448078 NAT16Q8N8M0 369 aa7.42□□□□□ -1.22
USP49-205ENST00000448078 RBBP8NLQ8NC74 664 aaPredicted RBP7.42□□□□□ -1.22
USP49-205ENST00000448078 HYPKQ9NX55 129 aa7.42□□□□□ -1.22
USP49-205ENST00000448078 DBF4Q9UBU7 674 aaPredicted RBP7.42□□□□□ -1.22
USP49-205ENST00000448078 MINPP1Q9UNW1 487 aa7.42□□□□□ -1.22
USP49-205ENST00000448078 TRIOBPQ9H2D6 2365 aa7.42□□□□□ -1.22
USP49-205ENST00000448078 CEP290O15078 2479 aa7.41□□□□□ -1.22
USP49-205ENST00000448078 WTIPA6NIX2 430 aaPredicted RBP7.41□□□□□ -1.22
USP49-205ENST00000448078 C9IYK1 514 aa7.41□□□□□ -1.22
USP49-205ENST00000448078 ITGA4P13612 1032 aa7.41□□□□□ -1.22
USP49-205ENST00000448078 ITGB5P18084 799 aa7.41□□□□□ -1.22
USP49-205ENST00000448078 TXKP42681 527 aa7.41□□□□□ -1.22
USP49-205ENST00000448078 KCNJ4P48050 445 aa7.41□□□□□ -1.22
USP49-205ENST00000448078 RBM5P52756 815 aaKnown RBP eCLIP7.41□□□□□ -1.22
USP49-205ENST00000448078 HEATR6Q6AI08 1181 aaKnown RBP7.41□□□□□ -1.22
USP49-205ENST00000448078 ZBTB38Q8NAP3 1195 aaPredicted RBP7.41□□□□□ -1.22
USP49-205ENST00000448078 RAET1EQ8TD07 263 aa7.41□□□□□ -1.22
USP49-205ENST00000448078 BRF1Q92994 677 aa7.41□□□□□ -1.22
USP49-205ENST00000448078 PPP1R14AQ96A00 147 aa7.41□□□□□ -1.22
USP49-205ENST00000448078 VWCEQ96DN2 955 aa7.41□□□□□ -1.22
USP49-205ENST00000448078 HOOK2Q96ED9 719 aa7.41□□□□□ -1.22
USP49-205ENST00000448078 HDAC8Q9BY41 377 aa7.41□□□□□ -1.22
USP49-205ENST00000448078 PCGF6Q9BYE7 350 aa7.41□□□□□ -1.22
USP49-205ENST00000448078 ANKRD2Q9GZV1 360 aa7.41□□□□□ -1.22
USP49-205ENST00000448078 GBP3Q9H0R5 595 aa7.41□□□□□ -1.22
USP49-205ENST00000448078 PCDHB10Q9UN67 800 aa7.41□□□□□ -1.22
USP49-205ENST00000448078 SCAF8Q9UPN6 1271 aaKnown RBP7.41□□□□□ -1.22
USP49-205ENST00000448078 SUGT1Q9Y2Z0 365 aa7.41□□□□□ -1.22
USP49-205ENST00000448078 PTCH2Q9Y6C5 1203 aa7.41□□□□□ -1.22
USP49-205ENST00000448078 CUL9Q8IWT3 2517 aa7.4□□□□□ -1.22
USP49-205ENST00000448078 PDE8AO60658 829 aa7.4□□□□□ -1.22
USP49-205ENST00000448078 SASH1O94885 1247 aa7.4□□□□□ -1.22
USP49-205ENST00000448078 GIPRP48546 466 aa7.4□□□□□ -1.22
USP49-205ENST00000448078 SLC7A5Q01650 507 aa7.4□□□□□ -1.22
USP49-205ENST00000448078 ARID5AQ03989 594 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms