RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 SEPT4O43236 478 aa21.79■■□□□ 1.08
SGCE-207ENST00000447873 YWHABP31946 246 aaKnown RBP21.79■■□□□ 1.08
SGCE-207ENST00000447873 UTP14CQ5TAP6 766 aaKnown RBP21.79■■□□□ 1.08
SGCE-207ENST00000447873 TRMT1LQ7Z2T5 733 aaKnown RBP21.79■■□□□ 1.08
SGCE-207ENST00000447873 AFAP1L1Q8TED9 768 aa21.79■■□□□ 1.08
SGCE-207ENST00000447873 ERCC4Q92889 916 aaPredicted RBP21.79■■□□□ 1.08
SGCE-207ENST00000447873 LRRC27Q9C0I9 530 aa21.79■■□□□ 1.08
SGCE-207ENST00000447873 SYCE3A1L190 88 aa21.78■■□□□ 1.08
SGCE-207ENST00000447873 ZBTB39O15060 712 aa21.78■■□□□ 1.08
SGCE-207ENST00000447873 ZNF862O60290 1169 aa21.78■■□□□ 1.08
SGCE-207ENST00000447873 DUSP11O75319 330 aaKnown RBP21.78■■□□□ 1.08
SGCE-207ENST00000447873 PPFIA4O75335 1185 aa21.78■■□□□ 1.08
SGCE-207ENST00000447873 LGR5O75473 907 aa21.78■■□□□ 1.08
SGCE-207ENST00000447873 PRR29P0C7W0 189 aa21.78■■□□□ 1.08
SGCE-207ENST00000447873 XRCC6P12956 609 aaKnown RBP eCLIP21.78■■□□□ 1.08
SGCE-207ENST00000447873 MAP3K21Q5TCX8 1036 aa21.78■■□□□ 1.08
SGCE-207ENST00000447873 RBM43Q6ZSC3 357 aaKnown RBP21.78■■□□□ 1.08
SGCE-207ENST00000447873 SYT2Q8N9I0 419 aaPredicted RBP21.78■■□□□ 1.08
SGCE-207ENST00000447873 PCYT2Q99447 389 aa21.78■■□□□ 1.08
SGCE-207ENST00000447873 PTPN22Q9Y2R2 807 aa21.78■■□□□ 1.08
SGCE-207ENST00000447873 EMSYQ7Z589 1322 aa21.78■■□□□ 1.08
SGCE-207ENST00000447873 GTPBP6O43824 516 aaPredicted RBP21.78■■□□□ 1.08
SGCE-207ENST00000447873 INHAP05111 366 aa21.78■■□□□ 1.08
SGCE-207ENST00000447873 MYL1P05976 194 aa21.78■■□□□ 1.08
SGCE-207ENST00000447873 MMP3P08254 477 aa21.78■■□□□ 1.08
SGCE-207ENST00000447873 HSPA8P11142 646 aaKnown RBP21.78■■□□□ 1.08
SGCE-207ENST00000447873 CCND3P30281 292 aaPredicted RBP21.78■■□□□ 1.08
SGCE-207ENST00000447873 SLC12A3P55017 1021 aa21.78■■□□□ 1.08
SGCE-207ENST00000447873 PRKCEQ02156 737 aa21.78■■□□□ 1.08
SGCE-207ENST00000447873 PLPPR4Q7Z2D5 763 aa21.78■■□□□ 1.08
SGCE-207ENST00000447873 CCDC43Q96MW1 224 aaKnown RBP21.78■■□□□ 1.08
SGCE-207ENST00000447873 BLZF1Q9H2G9 400 aa21.78■■□□□ 1.08
SGCE-207ENST00000447873 SMARCAD1Q9H4L7 1026 aa21.78■■□□□ 1.08
SGCE-207ENST00000447873 KIAA1468Q9P260 1216 aa21.78■■□□□ 1.08
SGCE-207ENST00000447873 DBR1Q9UK59 544 aaKnown RBP21.78■■□□□ 1.08
SGCE-207ENST00000447873 SMC2O95347 1197 aa21.77■■□□□ 1.08
SGCE-207ENST00000447873 RARBP10826 455 aa21.77■■□□□ 1.08
SGCE-207ENST00000447873 CASP1P29466 404 aa21.77■■□□□ 1.08
SGCE-207ENST00000447873 CUL4BQ13620 913 aa21.77■■□□□ 1.08
SGCE-207ENST00000447873 DGKDQ16760 1214 aa21.77■■□□□ 1.08
SGCE-207ENST00000447873 BRDTQ58F21 947 aaPredicted RBP21.77■■□□□ 1.08
SGCE-207ENST00000447873 OTUD6AQ7L8S5 288 aa21.77■■□□□ 1.08
SGCE-207ENST00000447873 BMP2KQ9NSY1 1161 aaPredicted RBP21.77■■□□□ 1.08
SGCE-207ENST00000447873 ANKEF1Q9NU02 776 aa21.77■■□□□ 1.08
SGCE-207ENST00000447873 MYMKA6NI61 221 aa21.76■■□□□ 1.07
SGCE-207ENST00000447873 A6NJR5 290 aa21.76■■□□□ 1.07
SGCE-207ENST00000447873 LGALS2P05162 132 aa21.76■■□□□ 1.07
SGCE-207ENST00000447873 HSPA1AP0DMV8 641 aaKnown RBP21.76■■□□□ 1.07
SGCE-207ENST00000447873 HSPA1BP0DMV9 641 aaKnown RBP21.76■■□□□ 1.07
SGCE-207ENST00000447873 CPT1AP50416 773 aa21.76■■□□□ 1.07
SGCE-207ENST00000447873 SLC26A2P50443 739 aa21.76■■□□□ 1.07
SGCE-207ENST00000447873 DPYDQ12882 1025 aa21.76■■□□□ 1.07
SGCE-207ENST00000447873 XKR3Q5GH77 459 aa21.76■■□□□ 1.07
SGCE-207ENST00000447873 ANO5Q75V66 913 aa21.76■■□□□ 1.07
SGCE-207ENST00000447873 GPBP1Q86WP2 473 aa21.76■■□□□ 1.07
SGCE-207ENST00000447873 TRIM50Q86XT4 487 aa21.76■■□□□ 1.07
SGCE-207ENST00000447873 C7orf25Q9BPX7 421 aa21.76■■□□□ 1.07
SGCE-207ENST00000447873 TRIM9Q9C026 710 aa21.76■■□□□ 1.07
SGCE-207ENST00000447873 SEPT9Q9UHD8 586 aaPredicted RBP21.76■■□□□ 1.07
SGCE-207ENST00000447873 PCDHA5Q9Y5H7 936 aa21.76■■□□□ 1.07
SGCE-207ENST00000447873 ARHGEF35A5YM69 484 aa21.75■■□□□ 1.07
SGCE-207ENST00000447873 OATP04181 439 aa21.75■■□□□ 1.07
SGCE-207ENST00000447873 ATP4AP20648 1035 aa21.75■■□□□ 1.07
SGCE-207ENST00000447873 CTCFP49711 727 aaPredicted RBP21.75■■□□□ 1.07
SGCE-207ENST00000447873 SMARCE1Q969G3 411 aa21.75■■□□□ 1.07
SGCE-207ENST00000447873 SPC25Q9HBM1 224 aa21.75■■□□□ 1.07
SGCE-207ENST00000447873 NRBP2Q9NSY0 501 aa21.75■■□□□ 1.07
SGCE-207ENST00000447873 ERAP1Q9NZ08 941 aa21.75■■□□□ 1.07
SGCE-207ENST00000447873 HTTP42858 3142 aa21.75■■□□□ 1.07
SGCE-207ENST00000447873 TMEM150BA6NC51 233 aa21.74■■□□□ 1.07
SGCE-207ENST00000447873 STBD1O95210 358 aa21.74■■□□□ 1.07
SGCE-207ENST00000447873 HOXD8P13378 290 aaPredicted RBP21.74■■□□□ 1.07
SGCE-207ENST00000447873 CYP11B2P19099 503 aa21.74■■□□□ 1.07
SGCE-207ENST00000447873 MARK3P27448 753 aa21.74■■□□□ 1.07
SGCE-207ENST00000447873 RARRES1P49788 294 aa21.74■■□□□ 1.07
SGCE-207ENST00000447873 LBX1P52954 281 aa21.74■■□□□ 1.07
SGCE-207ENST00000447873 XKR9Q5GH70 373 aa21.74■■□□□ 1.07
SGCE-207ENST00000447873 PLA2G4FQ68DD2 849 aa21.74■■□□□ 1.07
SGCE-207ENST00000447873 FAM167AQ96KS9 214 aa21.74■■□□□ 1.07
SGCE-207ENST00000447873 HMX1Q9NP08 348 aaPredicted RBP21.74■■□□□ 1.07
SGCE-207ENST00000447873 KRT18P05783 430 aaKnown RBP21.74■■□□□ 1.07
SGCE-207ENST00000447873 C6orf222P0C671 652 aaPredicted RBP21.74■■□□□ 1.07
SGCE-207ENST00000447873 ZNF286BP0CG31 522 aa21.74■■□□□ 1.07
SGCE-207ENST00000447873 GJA9P57773 515 aa21.74■■□□□ 1.07
SGCE-207ENST00000447873 ASIC1P78348 528 aa21.74■■□□□ 1.07
SGCE-207ENST00000447873 FSCN1Q16658 493 aaKnown RBP21.74■■□□□ 1.07
SGCE-207ENST00000447873 RINT1Q6NUQ1 792 aa21.74■■□□□ 1.07
SGCE-207ENST00000447873 SASS6Q6UVJ0 657 aa21.74■■□□□ 1.07
SGCE-207ENST00000447873 DYMQ7RTS9 669 aa21.74■■□□□ 1.07
SGCE-207ENST00000447873 SH3TC2Q8TF17 1288 aa21.74■■□□□ 1.07
SGCE-207ENST00000447873 DDX12PQ92771 950 aa21.74■■□□□ 1.07
SGCE-207ENST00000447873 CEP170P1Q96L14 293 aa21.74■■□□□ 1.07
SGCE-207ENST00000447873 SH2D3AQ9BRG2 576 aa21.74■■□□□ 1.07
SGCE-207ENST00000447873 KCND2Q9NZV8 630 aa21.74■■□□□ 1.07
SGCE-207ENST00000447873 DDX20Q9UHI6 824 aaKnown RBP21.74■■□□□ 1.07
SGCE-207ENST00000447873 TUBE1Q9UJT0 475 aa21.74■■□□□ 1.07
SGCE-207ENST00000447873 ZNF215Q9UL58 517 aaPredicted RBP21.74■■□□□ 1.07
SGCE-207ENST00000447873 ARID2Q68CP9 1835 aa21.73■■□□□ 1.07
SGCE-207ENST00000447873 CENPFP49454 3210 aa21.73■■□□□ 1.07
SGCE-207ENST00000447873 BEX3Q00994 111 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms