RNA–Protein interactions for RNA: ENST00000447784.1

LINC00408-201, long intergenic non-protein coding RNA 408, humanhuman

TSL 5 BASIC

Gene LINC00408, Length 560 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00408-201ENST00000447784 CUTAO60888 179 aa12.99□□□□□ -0.33
LINC00408-201ENST00000447784 ATG7O95352 703 aa12.99□□□□□ -0.33
LINC00408-201ENST00000447784 LGALS2P05162 132 aa12.99□□□□□ -0.33
LINC00408-201ENST00000447784 P4HBP07237 508 aaKnown RBP12.99□□□□□ -0.33
LINC00408-201ENST00000447784 ZNF286BP0CG31 522 aa12.99□□□□□ -0.33
LINC00408-201ENST00000447784 HOXD8P13378 290 aaPredicted RBP12.99□□□□□ -0.33
LINC00408-201ENST00000447784 SLC26A2P50443 739 aa12.99□□□□□ -0.33
LINC00408-201ENST00000447784 PSMC5P62195 406 aa12.99□□□□□ -0.33
LINC00408-201ENST00000447784 GPR153Q6NV75 609 aa12.99□□□□□ -0.33
LINC00408-201ENST00000447784 PLPPR4Q7Z2D5 763 aa12.99□□□□□ -0.33
LINC00408-201ENST00000447784 TPH2Q8IWU9 490 aa12.99□□□□□ -0.33
LINC00408-201ENST00000447784 LEO1Q8WVC0 666 aaPredicted RBP12.99□□□□□ -0.33
LINC00408-201ENST00000447784 CDK5RAP3Q96JB5 506 aa12.99□□□□□ -0.33
LINC00408-201ENST00000447784 EIF2AK1Q9BQI3 630 aaKnown RBP12.99□□□□□ -0.33
LINC00408-201ENST00000447784 TUT1Q9H6E5 874 aaKnown RBP12.99□□□□□ -0.33
LINC00408-201ENST00000447784 ERAP1Q9NZ08 941 aa12.99□□□□□ -0.33
LINC00408-201ENST00000447784 FBXO2Q9UK22 296 aaPredicted RBP12.99□□□□□ -0.33
LINC00408-201ENST00000447784 MORC2Q9Y6X9 1032 aaPredicted RBP12.99□□□□□ -0.33
LINC00408-201ENST00000447784 RANBP2P49792 3224 aaKnown RBP12.99□□□□□ -0.33
LINC00408-201ENST00000447784 EML1O00423 815 aa12.98□□□□□ -0.33
LINC00408-201ENST00000447784 LGR5O75473 907 aa12.98□□□□□ -0.33
LINC00408-201ENST00000447784 CCT6AP40227 531 aaKnown RBP12.98□□□□□ -0.33
LINC00408-201ENST00000447784 QARSP47897 775 aaKnown RBP12.98□□□□□ -0.33
LINC00408-201ENST00000447784 FPGSQ05932 587 aa12.98□□□□□ -0.33
LINC00408-201ENST00000447784 SPIRE1Q08AE8 756 aa12.98□□□□□ -0.33
LINC00408-201ENST00000447784 MFSD10Q14728 455 aa12.98□□□□□ -0.33
LINC00408-201ENST00000447784 ZRSR1Q15695 479 aaKnown RBP12.98□□□□□ -0.33
LINC00408-201ENST00000447784 IL17AQ16552 155 aa12.98□□□□□ -0.33
LINC00408-201ENST00000447784 NBPF20Q3BBV1 942 aa12.98□□□□□ -0.33
LINC00408-201ENST00000447784 B3GNT9Q6UX72 402 aa12.98□□□□□ -0.33
LINC00408-201ENST00000447784 SESTD1Q86VW0 696 aa12.98□□□□□ -0.33
LINC00408-201ENST00000447784 IGSF22Q8N9C0 903 aa12.98□□□□□ -0.33
LINC00408-201ENST00000447784 SNX29Q8TEQ0 813 aa12.98□□□□□ -0.33
LINC00408-201ENST00000447784 FAM167AQ96KS9 214 aa12.98□□□□□ -0.33
LINC00408-201ENST00000447784 GBP4Q96PP9 640 aa12.98□□□□□ -0.33
LINC00408-201ENST00000447784 CSRNP2Q9H175 543 aa12.98□□□□□ -0.33
LINC00408-201ENST00000447784 ZSWIM4Q9H7M6 989 aa12.98□□□□□ -0.33
LINC00408-201ENST00000447784 NRBP2Q9NSY0 501 aa12.98□□□□□ -0.33
LINC00408-201ENST00000447784 TRPC6Q9Y210 931 aa12.98□□□□□ -0.33
LINC00408-201ENST00000447784 TELO2Q9Y4R8 837 aa12.98□□□□□ -0.33
LINC00408-201ENST00000447784 EMSYQ7Z589 1322 aa12.97□□□□□ -0.33
LINC00408-201ENST00000447784 IGKV6D-21A0A0A0MT36 114 aa12.97□□□□□ -0.33
LINC00408-201ENST00000447784 SOX1O00570 391 aaPredicted RBP12.97□□□□□ -0.33
LINC00408-201ENST00000447784 F2P00734 622 aa12.97□□□□□ -0.33
LINC00408-201ENST00000447784 MARK3P27448 753 aa12.97□□□□□ -0.33
LINC00408-201ENST00000447784 PSEN2P49810 448 aa12.97□□□□□ -0.33
LINC00408-201ENST00000447784 CYP4A11Q02928 519 aa12.97□□□□□ -0.33
LINC00408-201ENST00000447784 PPIGQ13427 754 aaKnown RBP eCLIP12.97□□□□□ -0.33
LINC00408-201ENST00000447784 CTTNQ14247 550 aaKnown RBP12.97□□□□□ -0.33
LINC00408-201ENST00000447784 SHHQ15465 462 aa12.97□□□□□ -0.33
LINC00408-201ENST00000447784 TRMT1LQ7Z2T5 733 aaKnown RBP12.97□□□□□ -0.33
LINC00408-201ENST00000447784 TRIM50Q86XT4 487 aa12.97□□□□□ -0.33
LINC00408-201ENST00000447784 CCDC60Q8IWA6 550 aaPredicted RBP12.97□□□□□ -0.33
LINC00408-201ENST00000447784 TMEM199Q8N511 208 aa12.97□□□□□ -0.33
LINC00408-201ENST00000447784 C7orf31Q8N865 590 aa12.97□□□□□ -0.33
LINC00408-201ENST00000447784 ZNF579Q8NAF0 562 aaKnown RBP12.97□□□□□ -0.33
LINC00408-201ENST00000447784 BANK1Q8NDB2 785 aa12.97□□□□□ -0.33
LINC00408-201ENST00000447784 AFAP1L1Q8TED9 768 aa12.97□□□□□ -0.33
LINC00408-201ENST00000447784 KAT2BQ92831 832 aa12.97□□□□□ -0.33
LINC00408-201ENST00000447784 CALML4Q96GE6 196 aa12.97□□□□□ -0.33
LINC00408-201ENST00000447784 DYDC2Q96IM9 177 aa12.97□□□□□ -0.33
LINC00408-201ENST00000447784 CHAMP1Q96JM3 812 aa12.97□□□□□ -0.33
LINC00408-201ENST00000447784 CCDC43Q96MW1 224 aaKnown RBP12.97□□□□□ -0.33
LINC00408-201ENST00000447784 C16orf70Q9BSU1 422 aa12.97□□□□□ -0.33
LINC00408-201ENST00000447784 TRPV6Q9H1D0 765 aa12.97□□□□□ -0.33
LINC00408-201ENST00000447784 HIPK3Q9H422 1215 aa12.97□□□□□ -0.33
LINC00408-201ENST00000447784 TUFT1Q9NNX1 390 aa12.97□□□□□ -0.33
LINC00408-201ENST00000447784 FAM13BQ9NYF5 915 aa12.97□□□□□ -0.33
LINC00408-201ENST00000447784 RGL1Q9NZL6 768 aa12.97□□□□□ -0.33
LINC00408-201ENST00000447784 CCDC39Q9UFE4 941 aa12.97□□□□□ -0.33
LINC00408-201ENST00000447784 MAFBQ9Y5Q3 323 aaPredicted RBP12.97□□□□□ -0.33
LINC00408-201ENST00000447784 CEP290O15078 2479 aa12.97□□□□□ -0.33
LINC00408-201ENST00000447784 KDM3AQ9Y4C1 1321 aa12.96□□□□□ -0.33
LINC00408-201ENST00000447784 POTEB3A0JP26 581 aa12.96□□□□□ -0.33
LINC00408-201ENST00000447784 DDX11L8A8MPP1 907 aa12.96□□□□□ -0.33
LINC00408-201ENST00000447784 PP2D1A8MPX8 630 aa12.96□□□□□ -0.33
LINC00408-201ENST00000447784 HAS3O00219 553 aa12.96□□□□□ -0.33
LINC00408-201ENST00000447784 SLC26A4O43511 780 aa12.96□□□□□ -0.33
LINC00408-201ENST00000447784 RPA1P27694 616 aa12.96□□□□□ -0.33
LINC00408-201ENST00000447784 EPHB4P54760 987 aa12.96□□□□□ -0.33
LINC00408-201ENST00000447784 KIAA0753Q2KHM9 967 aa12.96□□□□□ -0.33
LINC00408-201ENST00000447784 FAM47CQ5HY64 1035 aa12.96□□□□□ -0.33
LINC00408-201ENST00000447784 C9orf50Q5SZB4 431 aa12.96□□□□□ -0.33
LINC00408-201ENST00000447784 POTEBQ6S5H4 581 aa12.96□□□□□ -0.33
LINC00408-201ENST00000447784 OTUD6AQ7L8S5 288 aa12.96□□□□□ -0.33
LINC00408-201ENST00000447784 CABP7Q86V35 215 aa12.96□□□□□ -0.33
LINC00408-201ENST00000447784 CLIC6Q96NY7 704 aa12.96□□□□□ -0.33
LINC00408-201ENST00000447784 PCYT2Q99447 389 aa12.96□□□□□ -0.33
LINC00408-201ENST00000447784 HSD17B14Q9BPX1 270 aa12.96□□□□□ -0.33
LINC00408-201ENST00000447784 LXNQ9BS40 222 aa12.96□□□□□ -0.33
LINC00408-201ENST00000447784 POLR3CQ9BUI4 534 aaPredicted RBP12.96□□□□□ -0.33
LINC00408-201ENST00000447784 NOC4LQ9BVI4 516 aaKnown RBP12.96□□□□□ -0.33
LINC00408-201ENST00000447784 PPP1R12CQ9BZL4 782 aa12.96□□□□□ -0.33
LINC00408-201ENST00000447784 NT5C3AQ9H0P0 336 aa12.96□□□□□ -0.33
LINC00408-201ENST00000447784 GDPD2Q9HCC8 539 aa12.96□□□□□ -0.33
LINC00408-201ENST00000447784 PCDHA7Q9UN72 937 aa12.96□□□□□ -0.33
LINC00408-201ENST00000447784 GOLGA6L22H0YM25 854 aa12.95□□□□□ -0.34
LINC00408-201ENST00000447784 HBP1O60381 514 aa12.95□□□□□ -0.34
LINC00408-201ENST00000447784 SLITRK3O94933 977 aa12.95□□□□□ -0.34
LINC00408-201ENST00000447784 OATP04181 439 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms