RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 PURAQ00577 322 aaKnown RBP20.14■□□□□ 0.81
TRAPPC4-203ENST00000447216 PRKCEQ02156 737 aa20.14■□□□□ 0.81
TRAPPC4-203ENST00000447216 TMEM119Q4V9L6 283 aa20.14■□□□□ 0.81
TRAPPC4-203ENST00000447216 KCNK18Q7Z418 384 aa20.14■□□□□ 0.81
TRAPPC4-203ENST00000447216 CKAP2LQ8IYA6 745 aa20.14■□□□□ 0.81
TRAPPC4-203ENST00000447216 ARRDC4Q8NCT1 418 aa20.14■□□□□ 0.81
TRAPPC4-203ENST00000447216 KAT2BQ92831 832 aa20.14■□□□□ 0.81
TRAPPC4-203ENST00000447216 CALML4Q96GE6 196 aa20.14■□□□□ 0.81
TRAPPC4-203ENST00000447216 ZSWIM4Q9H7M6 989 aa20.14■□□□□ 0.81
TRAPPC4-203ENST00000447216 H3BRB1 525 aa20.13■□□□□ 0.81
TRAPPC4-203ENST00000447216 STBD1O95210 358 aa20.13■□□□□ 0.81
TRAPPC4-203ENST00000447216 LIG1P18858 919 aa20.13■□□□□ 0.81
TRAPPC4-203ENST00000447216 PSEN2P49810 448 aa20.13■□□□□ 0.81
TRAPPC4-203ENST00000447216 NDUFA8P51970 172 aa20.13■□□□□ 0.81
TRAPPC4-203ENST00000447216 UBE2HP62256 183 aa20.13■□□□□ 0.81
TRAPPC4-203ENST00000447216 PSMC6P62333 389 aa20.13■□□□□ 0.81
TRAPPC4-203ENST00000447216 PLCB4Q15147 1175 aa20.13■□□□□ 0.81
TRAPPC4-203ENST00000447216 HYIQ5T013 277 aa20.13■□□□□ 0.81
TRAPPC4-203ENST00000447216 PLPPR4Q7Z2D5 763 aa20.13■□□□□ 0.81
TRAPPC4-203ENST00000447216 PCSK9Q8NBP7 692 aaKnown RBP20.13■□□□□ 0.81
TRAPPC4-203ENST00000447216 PIGOQ8TEQ8 1089 aa20.13■□□□□ 0.81
TRAPPC4-203ENST00000447216 MTG1Q9BT17 334 aaPredicted RBP20.13■□□□□ 0.81
TRAPPC4-203ENST00000447216 TMEM106CQ9BVX2 250 aa20.13■□□□□ 0.81
TRAPPC4-203ENST00000447216 CRISPLD2Q9H0B8 497 aa20.13■□□□□ 0.81
TRAPPC4-203ENST00000447216 TUT1Q9H6E5 874 aaKnown RBP20.13■□□□□ 0.81
TRAPPC4-203ENST00000447216 KCNH3Q9ULD8 1083 aa20.13■□□□□ 0.81
TRAPPC4-203ENST00000447216 HPSEQ9Y251 543 aa20.13■□□□□ 0.81
TRAPPC4-203ENST00000447216 DDX11L8A8MPP1 907 aa20.12■□□□□ 0.81
TRAPPC4-203ENST00000447216 KBTBD13C9JR72 458 aa20.12■□□□□ 0.81
TRAPPC4-203ENST00000447216 E9PMD0 336 aa20.12■□□□□ 0.81
TRAPPC4-203ENST00000447216 POLR2DO15514 142 aaKnown RBP20.12■□□□□ 0.81
TRAPPC4-203ENST00000447216 KPNA6O60684 536 aa20.12■□□□□ 0.81
TRAPPC4-203ENST00000447216 F2P00734 622 aa20.12■□□□□ 0.81
TRAPPC4-203ENST00000447216 ACLYP53396 1101 aa20.12■□□□□ 0.81
TRAPPC4-203ENST00000447216 MFSD10Q14728 455 aa20.12■□□□□ 0.81
TRAPPC4-203ENST00000447216 RRAGBQ5VZM2 374 aa20.12■□□□□ 0.81
TRAPPC4-203ENST00000447216 PLA2G4FQ68DD2 849 aa20.12■□□□□ 0.81
TRAPPC4-203ENST00000447216 C4orf19Q8IY42 314 aa20.12■□□□□ 0.81
TRAPPC4-203ENST00000447216 DHX58Q96C10 678 aa20.12■□□□□ 0.81
TRAPPC4-203ENST00000447216 RNPEPQ9H4A4 650 aa20.12■□□□□ 0.81
TRAPPC4-203ENST00000447216 ERAP1Q9NZ08 941 aa20.12■□□□□ 0.81
TRAPPC4-203ENST00000447216 CCDC39Q9UFE4 941 aa20.12■□□□□ 0.81
TRAPPC4-203ENST00000447216 ZNF215Q9UL58 517 aaPredicted RBP20.12■□□□□ 0.81
TRAPPC4-203ENST00000447216 BRCA2P51587 3418 aa20.12■□□□□ 0.81
TRAPPC4-203ENST00000447216 FAM237AA0A1B0GTK4 181 aa20.11■□□□□ 0.81
TRAPPC4-203ENST00000447216 SLC26A4O43511 780 aa20.11■□□□□ 0.81
TRAPPC4-203ENST00000447216 DKC1O60832 514 aaKnown RBP eCLIP20.11■□□□□ 0.81
TRAPPC4-203ENST00000447216 LYPLA2O95372 231 aa20.11■□□□□ 0.81
TRAPPC4-203ENST00000447216 OATP04181 439 aa20.11■□□□□ 0.81
TRAPPC4-203ENST00000447216 GJA8P48165 433 aa20.11■□□□□ 0.81
TRAPPC4-203ENST00000447216 KIAA0753Q2KHM9 967 aa20.11■□□□□ 0.81
TRAPPC4-203ENST00000447216 CCDC73Q6ZRK6 1079 aa20.11■□□□□ 0.81
TRAPPC4-203ENST00000447216 SH2D3AQ9BRG2 576 aa20.11■□□□□ 0.81
TRAPPC4-203ENST00000447216 TSEN34Q9BSV6 310 aaKnown RBP20.11■□□□□ 0.81
TRAPPC4-203ENST00000447216 NT5C3AQ9H0P0 336 aa20.11■□□□□ 0.81
TRAPPC4-203ENST00000447216 SEPT9Q9UHD8 586 aaPredicted RBP20.11■□□□□ 0.81
TRAPPC4-203ENST00000447216 MYH11P35749 1972 aa20.11■□□□□ 0.81
TRAPPC4-203ENST00000447216 HAS3O00219 553 aa20.1■□□□□ 0.81
TRAPPC4-203ENST00000447216 DNM1LO00429 736 aa20.1■□□□□ 0.81
TRAPPC4-203ENST00000447216 MUTP22033 750 aa20.1■□□□□ 0.81
TRAPPC4-203ENST00000447216 STAT6P42226 847 aa20.1■□□□□ 0.81
TRAPPC4-203ENST00000447216 SYKP43405 635 aa20.1■□□□□ 0.81
TRAPPC4-203ENST00000447216 NAALADL2Q58DX5 795 aa20.1■□□□□ 0.81
TRAPPC4-203ENST00000447216 XKR3Q5GH77 459 aa20.1■□□□□ 0.81
TRAPPC4-203ENST00000447216 ANO5Q75V66 913 aa20.1■□□□□ 0.81
TRAPPC4-203ENST00000447216 ATP8B4Q8TF62 1192 aa20.1■□□□□ 0.81
TRAPPC4-203ENST00000447216 NACC1Q96RE7 527 aa20.1■□□□□ 0.81
TRAPPC4-203ENST00000447216 BLOC1S4Q9NUP1 217 aa20.1■□□□□ 0.81
TRAPPC4-203ENST00000447216 TRPC6Q9Y210 931 aa20.1■□□□□ 0.81
TRAPPC4-203ENST00000447216 MOXD2PA6NHM9 499 aa20.09■□□□□ 0.81
TRAPPC4-203ENST00000447216 YWHABP31946 246 aaKnown RBP20.09■□□□□ 0.81
TRAPPC4-203ENST00000447216 MNX1P50219 401 aaPredicted RBP20.09■□□□□ 0.81
TRAPPC4-203ENST00000447216 SLC26A2P50443 739 aa20.09■□□□□ 0.81
TRAPPC4-203ENST00000447216 NPEPPSP55786 919 aa20.09■□□□□ 0.81
TRAPPC4-203ENST00000447216 E2F4Q16254 413 aa20.09■□□□□ 0.81
TRAPPC4-203ENST00000447216 VTI1AQ96AJ9 217 aa20.09■□□□□ 0.81
TRAPPC4-203ENST00000447216 FAM167AQ96KS9 214 aa20.09■□□□□ 0.81
TRAPPC4-203ENST00000447216 NRBP2Q9NSY0 501 aa20.09■□□□□ 0.81
TRAPPC4-203ENST00000447216 SERTAD1Q9UHV2 236 aa20.09■□□□□ 0.81
TRAPPC4-203ENST00000447216 PHF24Q9UPV7 400 aa20.09■□□□□ 0.81
TRAPPC4-203ENST00000447216 DNM3Q9UQ16 869 aa20.09■□□□□ 0.81
TRAPPC4-203ENST00000447216 A0A1W2PQ45 241 aaPredicted RBP20.08■□□□□ 0.81
TRAPPC4-203ENST00000447216 A0A1W2PQY0 241 aa20.08■□□□□ 0.81
TRAPPC4-203ENST00000447216 NR1I2O75469 434 aa20.08■□□□□ 0.81
TRAPPC4-203ENST00000447216 SSBP05455 408 aaKnown RBP eCLIP20.08■□□□□ 0.81
TRAPPC4-203ENST00000447216 FAM160A1Q05DH4 1040 aa20.08■□□□□ 0.81
TRAPPC4-203ENST00000447216 DHX8Q14562 1220 aaKnown RBP20.08■□□□□ 0.81
TRAPPC4-203ENST00000447216 MCM6Q14566 821 aa20.08■□□□□ 0.81
TRAPPC4-203ENST00000447216 NBPF20Q3BBV1 942 aa20.08■□□□□ 0.81
TRAPPC4-203ENST00000447216 MTERF2Q49AM1 385 aa20.08■□□□□ 0.81
TRAPPC4-203ENST00000447216 XKR9Q5GH70 373 aa20.08■□□□□ 0.81
TRAPPC4-203ENST00000447216 FMR1NBQ8N0W7 255 aaPredicted RBP20.08■□□□□ 0.81
TRAPPC4-203ENST00000447216 ENGASEQ8NFI3 743 aa20.08■□□□□ 0.81
TRAPPC4-203ENST00000447216 DIS3LQ8TF46 1054 aaKnown RBP20.08■□□□□ 0.81
TRAPPC4-203ENST00000447216 TRAPPC12Q8WVT3 735 aa20.08■□□□□ 0.81
TRAPPC4-203ENST00000447216 RAD54LQ92698 747 aa20.08■□□□□ 0.81
TRAPPC4-203ENST00000447216 KATNAL1Q9BW62 490 aa20.08■□□□□ 0.81
TRAPPC4-203ENST00000447216 GRIN2DO15399 1336 aa20.07■□□□□ 0.8
TRAPPC4-203ENST00000447216 HBP1O60381 514 aa20.07■□□□□ 0.8
TRAPPC4-203ENST00000447216 ZNF202O95125 648 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms