RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 MIER3Q7Z3K6 550 aa16.74■□□□□ 0.27
HDAC4-204ENST00000446876 CKAP2LQ8IYA6 745 aa16.74■□□□□ 0.27
HDAC4-204ENST00000446876 FAM49AQ9H0Q0 323 aaPredicted RBP16.74■□□□□ 0.27
HDAC4-204ENST00000446876 VAV3Q9UKW4 847 aa16.74■□□□□ 0.27
HDAC4-204ENST00000446876 MAFBQ9Y5Q3 323 aaPredicted RBP16.74■□□□□ 0.27
HDAC4-204ENST00000446876 RRN3P2A6NIE6 340 aa16.73■□□□□ 0.27
HDAC4-204ENST00000446876 RSPH10B2B2RC85 870 aa16.73■□□□□ 0.27
HDAC4-204ENST00000446876 ZBTB42B2RXF5 422 aa16.73■□□□□ 0.27
HDAC4-204ENST00000446876 EML1O00423 815 aa16.73■□□□□ 0.27
HDAC4-204ENST00000446876 ZNF862O60290 1169 aa16.73■□□□□ 0.27
HDAC4-204ENST00000446876 PFKMP08237 780 aa16.73■□□□□ 0.27
HDAC4-204ENST00000446876 RSPH10BP0C881 870 aa16.73■□□□□ 0.27
HDAC4-204ENST00000446876 GJB2P29033 226 aa16.73■□□□□ 0.27
HDAC4-204ENST00000446876 SLC26A2P50443 739 aa16.73■□□□□ 0.27
HDAC4-204ENST00000446876 JAK3P52333 1124 aa16.73■□□□□ 0.27
HDAC4-204ENST00000446876 Q7L0L9 218 aa16.73■□□□□ 0.27
HDAC4-204ENST00000446876 IL27Q8NEV9 243 aa16.73■□□□□ 0.27
HDAC4-204ENST00000446876 DNAJB3Q8WWF6 145 aa16.73■□□□□ 0.27
HDAC4-204ENST00000446876 NAP1L4Q99733 375 aaKnown RBP16.73■□□□□ 0.27
HDAC4-204ENST00000446876 LAMA2P24043 3122 aaKnown RBP16.72■□□□□ 0.27
HDAC4-204ENST00000446876 MARCH6O60337 910 aa16.72■□□□□ 0.27
HDAC4-204ENST00000446876 HBP1O60381 514 aa16.72■□□□□ 0.27
HDAC4-204ENST00000446876 SFNP31947 248 aa16.72■□□□□ 0.27
HDAC4-204ENST00000446876 PRKCEQ02156 737 aa16.72■□□□□ 0.27
HDAC4-204ENST00000446876 MICAL3Q7RTP6 2002 aa16.72■□□□□ 0.27
HDAC4-204ENST00000446876 TMEM150BA6NC51 233 aa16.71■□□□□ 0.27
HDAC4-204ENST00000446876 CHRNA1P02708 482 aa16.71■□□□□ 0.27
HDAC4-204ENST00000446876 CXCL10P02778 98 aa16.71■□□□□ 0.27
HDAC4-204ENST00000446876 MCM7P33993 719 aa16.71■□□□□ 0.27
HDAC4-204ENST00000446876 PBX2P40425 430 aa16.71■□□□□ 0.27
HDAC4-204ENST00000446876 TMEM62Q0P6H9 643 aa16.71■□□□□ 0.27
HDAC4-204ENST00000446876 PPP2R5CQ13362 524 aa16.71■□□□□ 0.27
HDAC4-204ENST00000446876 GNL2Q13823 731 aaKnown RBP16.71■□□□□ 0.27
HDAC4-204ENST00000446876 TAF2Q6P1X5 1199 aa16.71■□□□□ 0.27
HDAC4-204ENST00000446876 MTHFD1LQ6UB35 978 aa16.71■□□□□ 0.27
HDAC4-204ENST00000446876 BANK1Q8NDB2 785 aa16.71■□□□□ 0.27
HDAC4-204ENST00000446876 BBXQ8WY36 941 aaPredicted RBP16.71■□□□□ 0.27
HDAC4-204ENST00000446876 FAM20AQ96MK3 541 aa16.71■□□□□ 0.27
HDAC4-204ENST00000446876 MTIF3Q9H2K0 278 aaKnown RBP16.71■□□□□ 0.27
HDAC4-204ENST00000446876 FOXP1Q9H334 677 aaPredicted RBP16.71■□□□□ 0.27
HDAC4-204ENST00000446876 SMC3Q9UQE7 1217 aa16.71■□□□□ 0.27
HDAC4-204ENST00000446876 COL1A2P08123 1366 aa16.7■□□□□ 0.26
HDAC4-204ENST00000446876 TBX3O15119 743 aa16.7■□□□□ 0.26
HDAC4-204ENST00000446876 NEMFO60524 1076 aa16.7■□□□□ 0.26
HDAC4-204ENST00000446876 CAND2O75155 1236 aa16.7■□□□□ 0.26
HDAC4-204ENST00000446876 OATP04181 439 aa16.7■□□□□ 0.26
HDAC4-204ENST00000446876 ACTN1P12814 892 aa16.7■□□□□ 0.26
HDAC4-204ENST00000446876 KLRC1P26715 233 aa16.7■□□□□ 0.26
HDAC4-204ENST00000446876 SMAD3P84022 425 aaKnown RBP16.7■□□□□ 0.26
HDAC4-204ENST00000446876 MGAT3Q09327 533 aa16.7■□□□□ 0.26
HDAC4-204ENST00000446876 NBR1Q14596 966 aa16.7■□□□□ 0.26
HDAC4-204ENST00000446876 CALCRLQ16602 461 aa16.7■□□□□ 0.26
HDAC4-204ENST00000446876 ZNF484Q5JVG2 852 aa16.7■□□□□ 0.26
HDAC4-204ENST00000446876 NCAPH2Q6IBW4 605 aa16.7■□□□□ 0.26
HDAC4-204ENST00000446876 CNKSR3Q6P9H4 555 aa16.7■□□□□ 0.26
HDAC4-204ENST00000446876 NOSTRINQ8IVI9 506 aa16.7■□□□□ 0.26
HDAC4-204ENST00000446876 RDM1Q8NG50 284 aa16.7■□□□□ 0.26
HDAC4-204ENST00000446876 TNPO1Q92973 898 aaKnown RBP16.7■□□□□ 0.26
HDAC4-204ENST00000446876 TMEM60Q9H2L4 133 aa16.7■□□□□ 0.26
HDAC4-204ENST00000446876 PCDHA2Q9Y5H9 948 aa16.7■□□□□ 0.26
HDAC4-204ENST00000446876 SLC4A7Q9Y6M7 1214 aa16.7■□□□□ 0.26
HDAC4-204ENST00000446876 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.69■□□□□ 0.26
HDAC4-204ENST00000446876 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.69■□□□□ 0.26
HDAC4-204ENST00000446876 PARNO95453 639 aaKnown RBP16.69■□□□□ 0.26
HDAC4-204ENST00000446876 C22orf31O95567 290 aa16.69■□□□□ 0.26
HDAC4-204ENST00000446876 RABGGTBP53611 331 aa16.69■□□□□ 0.26
HDAC4-204ENST00000446876 MRPS6P82932 125 aaKnown RBP16.69■□□□□ 0.26
HDAC4-204ENST00000446876 SPIRE1Q08AE8 756 aa16.69■□□□□ 0.26
HDAC4-204ENST00000446876 ZNF174Q15697 407 aa16.69■□□□□ 0.26
HDAC4-204ENST00000446876 FAM26DQ5JW98 314 aa16.69■□□□□ 0.26
HDAC4-204ENST00000446876 RPAINQ86UA6 219 aa16.69■□□□□ 0.26
HDAC4-204ENST00000446876 DBF4BQ8NFT6 615 aa16.69■□□□□ 0.26
HDAC4-204ENST00000446876 FAM167AQ96KS9 214 aa16.69■□□□□ 0.26
HDAC4-204ENST00000446876 FAM161BQ96MY7 647 aa16.69■□□□□ 0.26
HDAC4-204ENST00000446876 SH2D3AQ9BRG2 576 aa16.69■□□□□ 0.26
HDAC4-204ENST00000446876 PBX4Q9BYU1 374 aa16.69■□□□□ 0.26
HDAC4-204ENST00000446876 KIF3AQ9Y496 699 aa16.69■□□□□ 0.26
HDAC4-204ENST00000446876 CDY2AQ9Y6F7 541 aa16.69■□□□□ 0.26
HDAC4-204ENST00000446876 ARID2Q68CP9 1835 aa16.68■□□□□ 0.26
HDAC4-204ENST00000446876 SMIM35A0A1B0GVV1 85 aa16.68■□□□□ 0.26
HDAC4-204ENST00000446876 STBD1O95210 358 aa16.68■□□□□ 0.26
HDAC4-204ENST00000446876 BAG4O95429 457 aaKnown RBP16.68■□□□□ 0.26
HDAC4-204ENST00000446876 GHRP10912 638 aa16.68■□□□□ 0.26
HDAC4-204ENST00000446876 DNAJB2P25686 324 aa16.68■□□□□ 0.26
HDAC4-204ENST00000446876 DEFB103AP81534 67 aa16.68■□□□□ 0.26
HDAC4-204ENST00000446876 CUL4AQ13619 759 aa16.68■□□□□ 0.26
HDAC4-204ENST00000446876 TTC38Q5R3I4 469 aa16.68■□□□□ 0.26
HDAC4-204ENST00000446876 MCTP1Q6DN14 999 aa16.68■□□□□ 0.26
HDAC4-204ENST00000446876 TMCO2Q7Z6W1 182 aaPredicted RBP16.68■□□□□ 0.26
HDAC4-204ENST00000446876 RSPH3Q86UC2 560 aa16.68■□□□□ 0.26
HDAC4-204ENST00000446876 SLFN12Q8IYM2 578 aa16.68■□□□□ 0.26
HDAC4-204ENST00000446876 DEFB123Q8N688 67 aa16.68■□□□□ 0.26
HDAC4-204ENST00000446876 PPP1R16BQ96T49 567 aa16.68■□□□□ 0.26
HDAC4-204ENST00000446876 WRAP73Q9P2S5 460 aaPredicted RBP16.68■□□□□ 0.26
HDAC4-204ENST00000446876 SEPT9Q9UHD8 586 aaPredicted RBP16.68■□□□□ 0.26
HDAC4-204ENST00000446876 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.68■□□□□ 0.26
HDAC4-204ENST00000446876 BAIAP3O94812 1187 aa16.67■□□□□ 0.26
HDAC4-204ENST00000446876 SLC34A2O95436 690 aa16.67■□□□□ 0.26
HDAC4-204ENST00000446876 MYOGP15173 224 aa16.67■□□□□ 0.26
HDAC4-204ENST00000446876 ATP2A2P16615 1042 aaKnown RBP16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms