RNA–Protein interactions for RNA: ENST00000446739.1

PHTF1-207, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 4

Gene PHTF1, Length 770 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-207ENST00000446739 BANK1Q8NDB2 785 aa20.46■□□□□ 0.87
PHTF1-207ENST00000446739 CTAGE1Q96RT6 745 aa20.46■□□□□ 0.87
PHTF1-207ENST00000446739 EIF2AK1Q9BQI3 630 aaKnown RBP20.46■□□□□ 0.87
PHTF1-207ENST00000446739 HIPK3Q9H422 1215 aa20.46■□□□□ 0.87
PHTF1-207ENST00000446739 NRBP2Q9NSY0 501 aa20.46■□□□□ 0.87
PHTF1-207ENST00000446739 LOXHD1Q8IVV2 1947 aa20.45■□□□□ 0.86
PHTF1-207ENST00000446739 H0YGN5 161 aa20.45■□□□□ 0.86
PHTF1-207ENST00000446739 TREHO43280 583 aa20.45■□□□□ 0.86
PHTF1-207ENST00000446739 PKP1Q13835 747 aa20.45■□□□□ 0.86
PHTF1-207ENST00000446739 PDIA5Q14554 519 aa20.45■□□□□ 0.86
PHTF1-207ENST00000446739 SF3A1Q15459 793 aaKnown RBP20.45■□□□□ 0.86
PHTF1-207ENST00000446739 XKR3Q5GH77 459 aa20.45■□□□□ 0.86
PHTF1-207ENST00000446739 FAM173BQ6P4H8 233 aa20.45■□□□□ 0.86
PHTF1-207ENST00000446739 SERINC5Q86VE9 423 aa20.45■□□□□ 0.86
PHTF1-207ENST00000446739 ERMNQ8TAM6 284 aa20.45■□□□□ 0.86
PHTF1-207ENST00000446739 CAGE1Q8TC20 777 aa20.45■□□□□ 0.86
PHTF1-207ENST00000446739 NOC4LQ9BVI4 516 aaKnown RBP20.45■□□□□ 0.86
PHTF1-207ENST00000446739 TUBE1Q9UJT0 475 aa20.45■□□□□ 0.86
PHTF1-207ENST00000446739 STK24Q9Y6E0 443 aa20.45■□□□□ 0.86
PHTF1-207ENST00000446739 ARID2Q68CP9 1835 aa20.45■□□□□ 0.86
PHTF1-207ENST00000446739 TCHHQ07283 1943 aa20.45■□□□□ 0.86
PHTF1-207ENST00000446739 MBLAC1A4D2B0 266 aaPredicted RBP20.44■□□□□ 0.86
PHTF1-207ENST00000446739 TIMP1P01033 207 aa20.44■□□□□ 0.86
PHTF1-207ENST00000446739 IGBP1P78318 339 aa20.44■□□□□ 0.86
PHTF1-207ENST00000446739 RBL2Q08999 1139 aa20.44■□□□□ 0.86
PHTF1-207ENST00000446739 BFSP2Q13515 415 aa20.44■□□□□ 0.86
PHTF1-207ENST00000446739 FOXD4L5Q5VV16 416 aaPredicted RBP20.44■□□□□ 0.86
PHTF1-207ENST00000446739 C4orf19Q8IY42 314 aa20.44■□□□□ 0.86
PHTF1-207ENST00000446739 FOXD4L4Q8WXT5 416 aaPredicted RBP20.44■□□□□ 0.86
PHTF1-207ENST00000446739 DYDC2Q96IM9 177 aa20.44■□□□□ 0.86
PHTF1-207ENST00000446739 HSD17B14Q9BPX1 270 aa20.44■□□□□ 0.86
PHTF1-207ENST00000446739 LXNQ9BS40 222 aa20.44■□□□□ 0.86
PHTF1-207ENST00000446739 ZSWIM4Q9H7M6 989 aa20.44■□□□□ 0.86
PHTF1-207ENST00000446739 RGL1Q9NZL6 768 aa20.44■□□□□ 0.86
PHTF1-207ENST00000446739 SCN5AQ14524 2016 aa20.43■□□□□ 0.86
PHTF1-207ENST00000446739 PITPNM1O00562 1244 aa20.43■□□□□ 0.86
PHTF1-207ENST00000446739 SLITRK3O94933 977 aa20.43■□□□□ 0.86
PHTF1-207ENST00000446739 BRD1O95696 1058 aa20.43■□□□□ 0.86
PHTF1-207ENST00000446739 CYP4A11Q02928 519 aa20.43■□□□□ 0.86
PHTF1-207ENST00000446739 MARCH8Q5T0T0 291 aa20.43■□□□□ 0.86
PHTF1-207ENST00000446739 HAUS3Q68CZ6 603 aa20.43■□□□□ 0.86
PHTF1-207ENST00000446739 TAF2Q6P1X5 1199 aa20.43■□□□□ 0.86
PHTF1-207ENST00000446739 TRMT1LQ7Z2T5 733 aaKnown RBP20.43■□□□□ 0.86
PHTF1-207ENST00000446739 IGSF22Q8N9C0 903 aa20.43■□□□□ 0.86
PHTF1-207ENST00000446739 DHX38Q92620 1227 aaKnown RBP20.43■□□□□ 0.86
PHTF1-207ENST00000446739 ZNF396Q96N95 335 aaPredicted RBP20.43■□□□□ 0.86
PHTF1-207ENST00000446739 LBHD1Q9BQE6 289 aaPredicted RBP20.43■□□□□ 0.86
PHTF1-207ENST00000446739 PPP1R12CQ9BZL4 782 aa20.43■□□□□ 0.86
PHTF1-207ENST00000446739 TUFT1Q9NNX1 390 aa20.43■□□□□ 0.86
PHTF1-207ENST00000446739 DAXXQ9UER7 740 aaPredicted RBP20.43■□□□□ 0.86
PHTF1-207ENST00000446739 LRWD1Q9UFC0 647 aa20.43■□□□□ 0.86
PHTF1-207ENST00000446739 CLIC4Q9Y696 253 aa20.43■□□□□ 0.86
PHTF1-207ENST00000446739 STBD1O95210 358 aa20.42■□□□□ 0.86
PHTF1-207ENST00000446739 LYPLA2O95372 231 aa20.42■□□□□ 0.86
PHTF1-207ENST00000446739 CTTNQ14247 550 aaKnown RBP20.42■□□□□ 0.86
PHTF1-207ENST00000446739 IL17AQ16552 155 aa20.42■□□□□ 0.86
PHTF1-207ENST00000446739 TPH2Q8IWU9 490 aa20.42■□□□□ 0.86
PHTF1-207ENST00000446739 RETREG2Q8NC44 543 aa20.42■□□□□ 0.86
PHTF1-207ENST00000446739 USP28Q96RU2 1077 aa20.42■□□□□ 0.86
PHTF1-207ENST00000446739 POLR3CQ9BUI4 534 aaPredicted RBP20.42■□□□□ 0.86
PHTF1-207ENST00000446739 NIFKQ9BYG3 293 aaKnown RBP20.42■□□□□ 0.86
PHTF1-207ENST00000446739 SEPT9Q9UHD8 586 aaPredicted RBP20.42■□□□□ 0.86
PHTF1-207ENST00000446739 DDX11L8A8MPP1 907 aa20.41■□□□□ 0.86
PHTF1-207ENST00000446739 ZBTB42B2RXF5 422 aa20.41■□□□□ 0.86
PHTF1-207ENST00000446739 CAND2O75155 1236 aa20.41■□□□□ 0.86
PHTF1-207ENST00000446739 RPLP2P05387 115 aaKnown RBP20.41■□□□□ 0.86
PHTF1-207ENST00000446739 MUTP22033 750 aa20.41■□□□□ 0.86
PHTF1-207ENST00000446739 ITGB8P26012 769 aa20.41■□□□□ 0.86
PHTF1-207ENST00000446739 KLRC1P26715 233 aa20.41■□□□□ 0.86
PHTF1-207ENST00000446739 PTPAQ15257 358 aa20.41■□□□□ 0.86
PHTF1-207ENST00000446739 TRIM71Q2Q1W2 868 aaKnown RBP20.41■□□□□ 0.86
PHTF1-207ENST00000446739 MFSD5Q6N075 450 aa20.41■□□□□ 0.86
PHTF1-207ENST00000446739 MTHFD1LQ6UB35 978 aa20.41■□□□□ 0.86
PHTF1-207ENST00000446739 TRAPPC12Q8WVT3 735 aa20.41■□□□□ 0.86
PHTF1-207ENST00000446739 FTOQ9C0B1 505 aaKnown RBP eCLIP20.41■□□□□ 0.86
PHTF1-207ENST00000446739 WRAP73Q9P2S5 460 aaPredicted RBP20.41■□□□□ 0.86
PHTF1-207ENST00000446739 PCDHA2Q9Y5H9 948 aa20.41■□□□□ 0.86
PHTF1-207ENST00000446739 MORC2Q9Y6X9 1032 aaPredicted RBP20.41■□□□□ 0.86
PHTF1-207ENST00000446739 VWA3AA6NCI4 1184 aa20.4■□□□□ 0.86
PHTF1-207ENST00000446739 MAGEB2O15479 319 aa20.4■□□□□ 0.86
PHTF1-207ENST00000446739 RPA1P27694 616 aa20.4■□□□□ 0.86
PHTF1-207ENST00000446739 CYP2C18P33260 490 aa20.4■□□□□ 0.86
PHTF1-207ENST00000446739 NASPP49321 788 aaPredicted RBP20.4■□□□□ 0.86
PHTF1-207ENST00000446739 CEBPZQ03701 1054 aaKnown RBP20.4■□□□□ 0.86
PHTF1-207ENST00000446739 TARBP2Q15633 366 aaKnown RBP20.4■□□□□ 0.86
PHTF1-207ENST00000446739 UMODL1Q5DID0 1318 aa20.4■□□□□ 0.86
PHTF1-207ENST00000446739 PRPF38BQ5VTL8 546 aaKnown RBP20.4■□□□□ 0.86
PHTF1-207ENST00000446739 ATL3Q6DD88 541 aa20.4■□□□□ 0.86
PHTF1-207ENST00000446739 ANO5Q75V66 913 aa20.4■□□□□ 0.86
PHTF1-207ENST00000446739 OTUD6AQ7L8S5 288 aa20.4■□□□□ 0.86
PHTF1-207ENST00000446739 RPAINQ86UA6 219 aa20.4■□□□□ 0.86
PHTF1-207ENST00000446739 CATSPER3Q86XQ3 398 aa20.4■□□□□ 0.86
PHTF1-207ENST00000446739 TMEM199Q8N511 208 aa20.4■□□□□ 0.86
PHTF1-207ENST00000446739 TET1Q8NFU7 2136 aa20.4■□□□□ 0.86
PHTF1-207ENST00000446739 BADQ92934 168 aa20.4■□□□□ 0.86
PHTF1-207ENST00000446739 WNT8BQ93098 351 aa20.4■□□□□ 0.86
PHTF1-207ENST00000446739 ZDHHC9Q9Y397 364 aa20.4■□□□□ 0.86
PHTF1-207ENST00000446739 PPME1Q9Y570 386 aa20.4■□□□□ 0.86
PHTF1-207ENST00000446739 SMIM35A0A1B0GVV1 85 aa20.39■□□□□ 0.85
PHTF1-207ENST00000446739 MED24O75448 989 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms