RNA–Protein interactions for RNA: ENST00000446312.5

DDR1-238, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 5 BASIC

Gene DDR1, Length 3,202 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-238	ENST00000446312	TRIM49C	P0CI26	452 aa		13.69	□□□□□ -0.22
DDR1-238	ENST00000446312	CYP2J2	P51589	502 aa		13.69	□□□□□ -0.22
DDR1-238	ENST00000446312	FKBP3	Q00688	224 aa	Known RBP	13.69	□□□□□ -0.22
DDR1-238	ENST00000446312	ZC2HC1C	Q53FD0	456 aa	Predicted RBP	13.69	□□□□□ -0.22
DDR1-238	ENST00000446312	GLYCTK	Q8IVS8	523 aa		13.69	□□□□□ -0.22
DDR1-238	ENST00000446312	METTL13	Q8N6R0	699 aa		13.69	□□□□□ -0.22
DDR1-238	ENST00000446312	MYCBPAP	Q8TBZ2	947 aa		13.69	□□□□□ -0.22
DDR1-238	ENST00000446312	MRRF	Q96E11	262 aa	Known RBP	13.69	□□□□□ -0.22
DDR1-238	ENST00000446312	SPATS2L	Q9NUQ6	558 aa	Known RBP	13.69	□□□□□ -0.22
DDR1-238	ENST00000446312	SPEF2	Q9C093	1822 aa		13.69	□□□□□ -0.22
DDR1-238	ENST00000446312	GCOM1	H8Y6P7	765 aa	Predicted RBP	13.69	□□□□□ -0.22
DDR1-238	ENST00000446312	ATMIN	O43313	823 aa	Predicted RBP	13.69	□□□□□ -0.22
DDR1-238	ENST00000446312	PPP1R12B	O60237	982 aa	Predicted RBP	13.69	□□□□□ -0.22
DDR1-238	ENST00000446312	PPP1R11	O60927	126 aa	Predicted RBP	13.69	□□□□□ -0.22
DDR1-238	ENST00000446312	PPP1R37	O75864	691 aa		13.69	□□□□□ -0.22
DDR1-238	ENST00000446312	GCNT3	O95395	438 aa		13.69	□□□□□ -0.22
DDR1-238	ENST00000446312	MYZAP	P0CAP1	466 aa		13.69	□□□□□ -0.22
DDR1-238	ENST00000446312	POLD1	P28340	1107 aa		13.69	□□□□□ -0.22
DDR1-238	ENST00000446312	PLTP	P55058	493 aa		13.69	□□□□□ -0.22
DDR1-238	ENST00000446312	FAM133B	Q5BKY9	247 aa	Known RBP	13.69	□□□□□ -0.22
DDR1-238	ENST00000446312	ALKBH5	Q6P6C2	394 aa	Known RBP	13.69	□□□□□ -0.22
DDR1-238	ENST00000446312	SFR1	Q86XK3	245 aa		13.69	□□□□□ -0.22
DDR1-238	ENST00000446312	CABS1	Q96KC9	395 aa		13.69	□□□□□ -0.22
DDR1-238	ENST00000446312	ATP6V0A2	Q9Y487	856 aa		13.69	□□□□□ -0.22
DDR1-238	ENST00000446312	ITGB4	P16144	1822 aa		13.69	□□□□□ -0.22
DDR1-238	ENST00000446312	RPS6KA5	O75582	802 aa		13.68	□□□□□ -0.22
DDR1-238	ENST00000446312	AP1G2	O75843	785 aa		13.68	□□□□□ -0.22
DDR1-238	ENST00000446312	FGG	P02679	453 aa		13.68	□□□□□ -0.22
DDR1-238	ENST00000446312	COG2	Q14746	738 aa		13.68	□□□□□ -0.22
DDR1-238	ENST00000446312	EMB	Q6PCB8	327 aa		13.68	□□□□□ -0.22
DDR1-238	ENST00000446312	FAXDC2	Q96IV6	333 aa		13.68	□□□□□ -0.22
DDR1-238	ENST00000446312	FAM118B	Q9BPY3	351 aa		13.68	□□□□□ -0.22
DDR1-238	ENST00000446312	HDAC9	Q9UKV0	1011 aa		13.68	□□□□□ -0.22
DDR1-238	ENST00000446312	PNMA2	Q9UL42	364 aa		13.68	□□□□□ -0.22
DDR1-238	ENST00000446312	ZBTB21	Q9ULJ3	1066 aa		13.68	□□□□□ -0.22
DDR1-238	ENST00000446312	SCAF8	Q9UPN6	1271 aa	Known RBP	13.68	□□□□□ -0.22
DDR1-238	ENST00000446312	EDIL3	O43854	480 aa		13.68	□□□□□ -0.22
DDR1-238	ENST00000446312	TUBB4B	P68371	445 aa		13.68	□□□□□ -0.22
DDR1-238	ENST00000446312	ZYX	Q15942	572 aa	Known RBP	13.68	□□□□□ -0.22
DDR1-238	ENST00000446312	PTGIS	Q16647	500 aa		13.68	□□□□□ -0.22
DDR1-238	ENST00000446312	CCDC121	Q6ZUS5	278 aa		13.68	□□□□□ -0.22
DDR1-238	ENST00000446312	PNMA8A	Q86V59	439 aa	Predicted RBP	13.68	□□□□□ -0.22
DDR1-238	ENST00000446312	ADGRF4	Q8IZF3	695 aa		13.68	□□□□□ -0.22
DDR1-238	ENST00000446312	BORCS6	Q96GS4	357 aa		13.68	□□□□□ -0.22
DDR1-238	ENST00000446312	NOC2L	Q9Y3T9	749 aa	Known RBP	13.68	□□□□□ -0.22
DDR1-238	ENST00000446312	NID2	Q14112	1375 aa		13.68	□□□□□ -0.22
DDR1-238	ENST00000446312	RBAK-RBAKDN	I3L0D1	243 aa		13.68	□□□□□ -0.22
DDR1-238	ENST00000446312	MED24	O75448	989 aa		13.68	□□□□□ -0.22
DDR1-238	ENST00000446312	SCFD1	Q8WVM8	642 aa		13.68	□□□□□ -0.22
DDR1-238	ENST00000446312	ATP6V1G3	Q96LB4	118 aa		13.68	□□□□□ -0.22
DDR1-238	ENST00000446312	PSTPIP2	Q9H939	334 aa		13.68	□□□□□ -0.22
DDR1-238	ENST00000446312	LRP6	O75581	1613 aa		13.67	□□□□□ -0.22
DDR1-238	ENST00000446312	SHBG	P04278	402 aa		13.67	□□□□□ -0.22
DDR1-238	ENST00000446312	SERPING1	P05155	500 aa		13.67	□□□□□ -0.22
DDR1-238	ENST00000446312	MDH1	P40925	334 aa	Known RBP	13.67	□□□□□ -0.22
DDR1-238	ENST00000446312	CTTN	Q14247	550 aa	Known RBP	13.67	□□□□□ -0.22
DDR1-238	ENST00000446312	TRIP13	Q15645	432 aa	Predicted RBP	13.67	□□□□□ -0.22
DDR1-238	ENST00000446312	TPTE2	Q6XPS3	522 aa		13.67	□□□□□ -0.22
DDR1-238	ENST00000446312	HAS1	Q92839	578 aa		13.67	□□□□□ -0.22
DDR1-238	ENST00000446312	SH3GL2	Q99962	352 aa		13.67	□□□□□ -0.22
DDR1-238	ENST00000446312	BAIAP2L1	Q9UHR4	511 aa		13.67	□□□□□ -0.22
DDR1-238	ENST00000446312	SPDYE3	A6NKU9	549 aa		13.67	□□□□□ -0.22
DDR1-238	ENST00000446312	MEFV	O15553	781 aa	Predicted RBP	13.67	□□□□□ -0.22
DDR1-238	ENST00000446312	NMT1	P30419	496 aa	Known RBP	13.67	□□□□□ -0.22
DDR1-238	ENST00000446312	SSTR3	P32745	418 aa	Predicted RBP	13.67	□□□□□ -0.22
DDR1-238	ENST00000446312	UAP1	Q16222	522 aa	Predicted RBP	13.67	□□□□□ -0.22
DDR1-238	ENST00000446312	IQCK	Q8N0W5	287 aa		13.67	□□□□□ -0.22
DDR1-238	ENST00000446312	GUF1	Q8N442	669 aa	Known RBP	13.67	□□□□□ -0.22
DDR1-238	ENST00000446312	RPGR	Q92834	1020 aa	Known RBP	13.67	□□□□□ -0.22
DDR1-238	ENST00000446312	PCIF1	Q9H4Z3	704 aa		13.67	□□□□□ -0.22
DDR1-238	ENST00000446312	UPP2	O95045	317 aa		13.66	□□□□□ -0.22
DDR1-238	ENST00000446312	GDF11	O95390	407 aa		13.66	□□□□□ -0.22
DDR1-238	ENST00000446312	KCNJ1	P48048	391 aa		13.66	□□□□□ -0.22
DDR1-238	ENST00000446312	TNNC1	P63316	161 aa		13.66	□□□□□ -0.22
DDR1-238	ENST00000446312	PALB2	Q86YC2	1186 aa		13.66	□□□□□ -0.22
DDR1-238	ENST00000446312	TCP11	Q8WWU5	503 aa		13.66	□□□□□ -0.22
DDR1-238	ENST00000446312	BTBD6	Q96KE9	485 aa		13.66	□□□□□ -0.22
DDR1-238	ENST00000446312	TACO1	Q9BSH4	297 aa	Known RBP	13.66	□□□□□ -0.22
DDR1-238	ENST00000446312	BHMT2	Q9H2M3	363 aa		13.66	□□□□□ -0.22
DDR1-238	ENST00000446312	ETAA1	Q9NY74	926 aa		13.66	□□□□□ -0.22
DDR1-238	ENST00000446312	TAS2R14	Q9NYV8	317 aa		13.66	□□□□□ -0.22
DDR1-238	ENST00000446312	CETN3	O15182	167 aa		13.66	□□□□□ -0.22
DDR1-238	ENST00000446312	FGR	P09769	529 aa		13.66	□□□□□ -0.22
DDR1-238	ENST00000446312	GPSM2	P81274	684 aa		13.66	□□□□□ -0.22
DDR1-238	ENST00000446312	C2CD6	Q53TS8	623 aa		13.66	□□□□□ -0.22
DDR1-238	ENST00000446312	ZFPM1	Q8IX07	1006 aa		13.66	□□□□□ -0.22
DDR1-238	ENST00000446312	CCDC13	Q8IYE1	715 aa		13.66	□□□□□ -0.22
DDR1-238	ENST00000446312	USP38	Q8NB14	1042 aa		13.66	□□□□□ -0.22
DDR1-238	ENST00000446312	RBM46	Q8TBY0	533 aa	Known RBP	13.66	□□□□□ -0.22
DDR1-238	ENST00000446312	SPIRE2	Q8WWL2	714 aa		13.66	□□□□□ -0.22
DDR1-238	ENST00000446312	ANKS1A	Q92625	1134 aa		13.66	□□□□□ -0.22
DDR1-238	ENST00000446312	CYFIP2	Q96F07	1278 aa		13.66	□□□□□ -0.22
DDR1-238	ENST00000446312	MTA3	Q9BTC8	594 aa		13.66	□□□□□ -0.22
DDR1-238	ENST00000446312	MTFR1L	Q9H019	292 aa		13.66	□□□□□ -0.22
DDR1-238	ENST00000446312	DUOX1	Q9NRD9	1551 aa		13.66	□□□□□ -0.22
DDR1-238	ENST00000446312	TISP43	B9A030	160 aa		13.66	□□□□□ -0.22
DDR1-238	ENST00000446312	SHOX2	O60902	331 aa	Predicted RBP	13.66	□□□□□ -0.22
DDR1-238	ENST00000446312	VIM	P08670	466 aa	Known RBP	13.66	□□□□□ -0.22
DDR1-238	ENST00000446312	ZNF76	P36508	570 aa		13.66	□□□□□ -0.22
DDR1-238	ENST00000446312	CCNH	P51946	323 aa	Predicted RBP	13.66	□□□□□ -0.22

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