RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 POTEIP0CG38 1075 aa18.03■□□□□ 0.48
TCOF1-206ENST00000445265 AKR1B1P15121 316 aa18.03■□□□□ 0.48
TCOF1-206ENST00000445265 MAPK4P31152 587 aa18.03■□□□□ 0.48
TCOF1-206ENST00000445265 PKN1Q16512 942 aa18.03■□□□□ 0.48
TCOF1-206ENST00000445265 SGO2Q562F6 1265 aa18.03■□□□□ 0.48
TCOF1-206ENST00000445265 PDXDC2PQ6P474 469 aa18.03■□□□□ 0.48
TCOF1-206ENST00000445265 POTEGQ6S5H5 508 aa18.03■□□□□ 0.48
TCOF1-206ENST00000445265 POTEEQ6S8J3 1075 aa18.03■□□□□ 0.48
TCOF1-206ENST00000445265 RSRC2Q7L4I2 434 aaKnown RBP18.03■□□□□ 0.48
TCOF1-206ENST00000445265 NIM1KQ8IY84 436 aa18.03■□□□□ 0.48
TCOF1-206ENST00000445265 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.03■□□□□ 0.487e-7■□□□□ 9.5
TCOF1-206ENST00000445265 RIMS1Q86UR5 1692 aaKnown RBP18.02■□□□□ 0.48
TCOF1-206ENST00000445265 HNRNPDLO14979 420 aaKnown RBP18.02■□□□□ 0.48
TCOF1-206ENST00000445265 IFNAR2P48551 515 aa18.02■□□□□ 0.48
TCOF1-206ENST00000445265 SNCBQ16143 134 aa18.02■□□□□ 0.48
TCOF1-206ENST00000445265 WDR93Q6P2C0 686 aa18.02■□□□□ 0.48
TCOF1-206ENST00000445265 CALR3Q96L12 384 aaKnown RBP18.02■□□□□ 0.48
TCOF1-206ENST00000445265 JCADQ9P266 1359 aa18.02■□□□□ 0.48
TCOF1-206ENST00000445265 PODXLO00592 558 aa18.02■□□□□ 0.48
TCOF1-206ENST00000445265 NPR1P16066 1061 aa18.02■□□□□ 0.48
TCOF1-206ENST00000445265 FAM182BQ5T319 152 aa18.02■□□□□ 0.48
TCOF1-206ENST00000445265 RCSD1Q6JBY9 416 aa18.02■□□□□ 0.48
TCOF1-206ENST00000445265 C16orf86Q6ZW13 317 aa18.02■□□□□ 0.48
TCOF1-206ENST00000445265 SEL1LQ9UBV2 794 aa18.02■□□□□ 0.48
TCOF1-206ENST00000445265 LGSNQ5TDP6 509 aa18.02■□□□□ 0.48
TCOF1-206ENST00000445265 HPCAL4Q9UM19 191 aa18.02■□□□□ 0.48
TCOF1-206ENST00000445265 SUGT1Q9Y2Z0 365 aa18.02■□□□□ 0.48
TCOF1-206ENST00000445265 GPSM2P81274 684 aa18.02■□□□□ 0.47
TCOF1-206ENST00000445265 FAM160B2Q86V87 743 aa18.02■□□□□ 0.47
TCOF1-206ENST00000445265 STK32BQ9NY57 414 aa18.02■□□□□ 0.47
TCOF1-206ENST00000445265 PLAGL2Q9UPG8 496 aa18.02■□□□□ 0.47
TCOF1-206ENST00000445265 SYNGAP1Q96PV0 1343 aa18.02■□□□□ 0.47
TCOF1-206ENST00000445265 SFI1A8K8P3 1242 aa18.01■□□□□ 0.47
TCOF1-206ENST00000445265 SLC26A4O43511 780 aa18.01■□□□□ 0.47
TCOF1-206ENST00000445265 ANXA13P27216 316 aa18.01■□□□□ 0.47
TCOF1-206ENST00000445265 RC3H1Q5TC82 1133 aaKnown RBP18.01■□□□□ 0.47
TCOF1-206ENST00000445265 PIGOQ8TEQ8 1089 aa18.01■□□□□ 0.47
TCOF1-206ENST00000445265 ATP6V0A1Q93050 837 aa18.01■□□□□ 0.47
TCOF1-206ENST00000445265 SLITRK6Q9H5Y7 841 aa18.01■□□□□ 0.47
TCOF1-206ENST00000445265 AZI2Q9H6S1 392 aa18.01■□□□□ 0.47
TCOF1-206ENST00000445265 FLT1P17948 1338 aa18.01■□□□□ 0.47
TCOF1-206ENST00000445265 KNDC1Q76NI1 1749 aa18.01■□□□□ 0.47
TCOF1-206ENST00000445265 PHBP35232 272 aa18.01■□□□□ 0.47
TCOF1-206ENST00000445265 ZNF543Q08ER8 600 aa18.01■□□□□ 0.47
TCOF1-206ENST00000445265 ITPK1Q13572 414 aa18.01■□□□□ 0.47
TCOF1-206ENST00000445265 MUM1L1Q5H9M0 696 aa18.01■□□□□ 0.47
TCOF1-206ENST00000445265 C6orf118Q5T5N4 469 aa18.01■□□□□ 0.47
TCOF1-206ENST00000445265 SRLQ86TD4 932 aa18.01■□□□□ 0.47
TCOF1-206ENST00000445265 KBTBD4Q9NVX7 518 aa18.01■□□□□ 0.47
TCOF1-206ENST00000445265 ANKRD65E5RJM6 399 aa18.01■□□□□ 0.47
TCOF1-206ENST00000445265 PDXKO00764 312 aa18.01■□□□□ 0.47
TCOF1-206ENST00000445265 RASGRF2O14827 1237 aa18.01■□□□□ 0.47
TCOF1-206ENST00000445265 ADCY2Q08462 1091 aa18.01■□□□□ 0.47
TCOF1-206ENST00000445265 TRAPPC11Q7Z392 1133 aa18.01■□□□□ 0.47
TCOF1-206ENST00000445265 MMGT1Q8N4V1 131 aa18.01■□□□□ 0.47
TCOF1-206ENST00000445265 PNKPQ96T60 521 aa18.01■□□□□ 0.47
TCOF1-206ENST00000445265 TROVE2P10155 538 aaKnown RBP eCLIP18.01■□□□□ 0.47
TCOF1-206ENST00000445265 FXR2P51116 673 aaKnown RBP eCLIP18.01■□□□□ 0.473e-7■■■■□ 22.5
TCOF1-206ENST00000445265 FIGNQ5HY92 759 aa18.01■□□□□ 0.47
TCOF1-206ENST00000445265 L1RE1Q9UN81 338 aa18.01■□□□□ 0.47
TCOF1-206ENST00000445265 ZNF148Q9UQR1 794 aa18.01■□□□□ 0.47
TCOF1-206ENST00000445265 LMNTD2Q8IXW0 634 aa18■□□□□ 0.47
TCOF1-206ENST00000445265 ATP6V1G3Q96LB4 118 aa18■□□□□ 0.47
TCOF1-206ENST00000445265 ATF7P17544 494 aaPredicted RBP18■□□□□ 0.47
TCOF1-206ENST00000445265 CRKP46108 304 aa18■□□□□ 0.47
TCOF1-206ENST00000445265 ZNF131P52739 623 aa18■□□□□ 0.47
TCOF1-206ENST00000445265 SNX16P57768 344 aa18■□□□□ 0.47
TCOF1-206ENST00000445265 PPP1R2P3Q6NXS1 205 aa18■□□□□ 0.47
TCOF1-206ENST00000445265 MST1RQ04912 1400 aa18■□□□□ 0.47
TCOF1-206ENST00000445265 CCDC93Q567U6 631 aa18■□□□□ 0.47
TCOF1-206ENST00000445265 CCDC62Q6P9F0 684 aa18■□□□□ 0.47
TCOF1-206ENST00000445265 MCUR1Q96AQ8 359 aa18■□□□□ 0.47
TCOF1-206ENST00000445265 RAB3IPQ96QF0 476 aaPredicted RBP18■□□□□ 0.47
TCOF1-206ENST00000445265 MAD2L2Q9UI95 211 aa18■□□□□ 0.47
TCOF1-206ENST00000445265 PCK1P35558 622 aa18■□□□□ 0.47
TCOF1-206ENST00000445265 EDRF1Q3B7T1 1238 aa18■□□□□ 0.47
TCOF1-206ENST00000445265 TTI2Q6NXR4 508 aa18■□□□□ 0.47
TCOF1-206ENST00000445265 INTS5Q6P9B9 1019 aaKnown RBP18■□□□□ 0.47
TCOF1-206ENST00000445265 ARHGAP24Q8N264 748 aa18■□□□□ 0.47
TCOF1-206ENST00000445265 DDX47Q9H0S4 455 aaKnown RBP18■□□□□ 0.47
TCOF1-206ENST00000445265 ABCB11O95342 1321 aa18■□□□□ 0.47
TCOF1-206ENST00000445265 UBR1Q8IWV7 1749 aa17.99■□□□□ 0.47
TCOF1-206ENST00000445265 CLTAP09496 248 aa17.99■□□□□ 0.47
TCOF1-206ENST00000445265 PPP4CP60510 307 aa17.99■□□□□ 0.47
TCOF1-206ENST00000445265 KMT5AQ9NQR1 393 aa17.99■□□□□ 0.47
TCOF1-206ENST00000445265 PACSIN2Q9UNF0 486 aaPredicted RBP17.99■□□□□ 0.47
TCOF1-206ENST00000445265 AKAP12Q02952 1782 aa17.99■□□□□ 0.47
TCOF1-206ENST00000445265 NOP56O00567 594 aaKnown RBP17.99■□□□□ 0.47
TCOF1-206ENST00000445265 GH2P01242 217 aa17.99■□□□□ 0.47
TCOF1-206ENST00000445265 NFIXQ14938 502 aa17.99■□□□□ 0.47
TCOF1-206ENST00000445265 HADHQ16836 314 aaKnown RBP17.99■□□□□ 0.47
TCOF1-206ENST00000445265 MMS22LQ6ZRQ5 1243 aa17.99■□□□□ 0.47
TCOF1-206ENST00000445265 APBB1IPQ7Z5R6 666 aaPredicted RBP17.99■□□□□ 0.47
TCOF1-206ENST00000445265 VGLL2Q8N8G2 317 aa17.99■□□□□ 0.47
TCOF1-206ENST00000445265 RSAD2Q8WXG1 361 aa17.99■□□□□ 0.47
TCOF1-206ENST00000445265 PRELPP51888 382 aa17.99■□□□□ 0.47
TCOF1-206ENST00000445265 RWDD2BP57060 319 aa17.99■□□□□ 0.47
TCOF1-206ENST00000445265 MDM2Q00987 491 aaPredicted RBP17.99■□□□□ 0.47
TCOF1-206ENST00000445265 TSNAXIP1Q2TAA8 658 aa17.99■□□□□ 0.47
TCOF1-206ENST00000445265 CCDC14Q49A88 953 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms