RNA–Protein interactions for RNA: ENST00000443727.1

LRCH3-208, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-208ENST00000443727 USP38Q8NB14 1042 aa22.74■■□□□ 1.23
LRCH3-208ENST00000443727 INSL6Q9Y581 213 aa22.74■■□□□ 1.23
LRCH3-208ENST00000443727 PCDHA2Q9Y5H9 948 aa22.74■■□□□ 1.23
LRCH3-208ENST00000443727 PCDHA10Q9Y5I2 948 aa22.74■■□□□ 1.23
LRCH3-208ENST00000443727 A0A0C4DFX4 3053 aa22.73■■□□□ 1.23
LRCH3-208ENST00000443727 ARHGEF15O94989 841 aa22.73■■□□□ 1.23
LRCH3-208ENST00000443727 TRMT1LQ7Z2T5 733 aaKnown RBP22.73■■□□□ 1.23
LRCH3-208ENST00000443727 DAGLBQ8NCG7 672 aa22.73■■□□□ 1.23
LRCH3-208ENST00000443727 LENG9Q96B70 501 aa22.73■■□□□ 1.23
LRCH3-208ENST00000443727 KCNJ14Q9UNX9 436 aa22.73■■□□□ 1.23
LRCH3-208ENST00000443727 MSH4O15457 936 aa22.72■■□□□ 1.23
LRCH3-208ENST00000443727 GAS7O60861 476 aa22.72■■□□□ 1.23
LRCH3-208ENST00000443727 UPP2O95045 317 aa22.72■■□□□ 1.23
LRCH3-208ENST00000443727 MGAT3Q09327 533 aa22.72■■□□□ 1.23
LRCH3-208ENST00000443727 TMEM62Q0P6H9 643 aa22.72■■□□□ 1.23
LRCH3-208ENST00000443727 LPIN1Q14693 890 aa22.72■■□□□ 1.23
LRCH3-208ENST00000443727 MTHFD1LQ6UB35 978 aa22.72■■□□□ 1.23
LRCH3-208ENST00000443727 MTUS1Q9ULD2 1270 aa22.72■■□□□ 1.23
LRCH3-208ENST00000443727 STK36Q9NRP7 1315 aa22.72■■□□□ 1.23
LRCH3-208ENST00000443727 WDR64B1ANS9 1081 aa22.71■■□□□ 1.23
LRCH3-208ENST00000443727 KLRC1P26715 233 aa22.71■■□□□ 1.23
LRCH3-208ENST00000443727 NEK4P51957 841 aa22.71■■□□□ 1.23
LRCH3-208ENST00000443727 MKRN4PQ13434 485 aaPredicted RBP22.71■■□□□ 1.23
LRCH3-208ENST00000443727 NONOQ15233 471 aaKnown RBP eCLIP22.71■■□□□ 1.23
LRCH3-208ENST00000443727 ZNF484Q5JVG2 852 aa22.71■■□□□ 1.23
LRCH3-208ENST00000443727 FBXO47Q5MNV8 452 aa22.71■■□□□ 1.23
LRCH3-208ENST00000443727 LRCH2Q5VUJ6 765 aa22.71■■□□□ 1.23
LRCH3-208ENST00000443727 KRT25Q7Z3Z0 450 aa22.71■■□□□ 1.23
LRCH3-208ENST00000443727 WASF1Q92558 559 aa22.71■■□□□ 1.23
LRCH3-208ENST00000443727 YME1L1Q96TA2 773 aa22.71■■□□□ 1.23
LRCH3-208ENST00000443727 RIT2Q99578 217 aa22.71■■□□□ 1.23
LRCH3-208ENST00000443727 GABBR1Q9UBS5 961 aa22.71■■□□□ 1.23
LRCH3-208ENST00000443727 EYSQ5T1H1 3165 aa22.71■■□□□ 1.23
LRCH3-208ENST00000443727 CHD7Q9P2D1 2997 aa22.7■■□□□ 1.22
LRCH3-208ENST00000443727 CCDC194A0A1B0GVG4 234 aa22.7■■□□□ 1.22
LRCH3-208ENST00000443727 SMIM35A0A1B0GVV1 85 aa22.7■■□□□ 1.22
LRCH3-208ENST00000443727 LINC01553A4QN01 128 aa22.7■■□□□ 1.22
LRCH3-208ENST00000443727 EPOPA6NHQ4 379 aa22.7■■□□□ 1.22
LRCH3-208ENST00000443727 CHMP2AO43633 222 aa22.7■■□□□ 1.22
LRCH3-208ENST00000443727 TSHZ1Q6ZSZ6 1077 aa22.7■■□□□ 1.22
LRCH3-208ENST00000443727 NME8Q8N427 588 aa22.7■■□□□ 1.22
LRCH3-208ENST00000443727 NECAB1Q8N987 351 aa22.7■■□□□ 1.22
LRCH3-208ENST00000443727 BBXQ8WY36 941 aaPredicted RBP22.7■■□□□ 1.22
LRCH3-208ENST00000443727 TGS1Q96RS0 853 aaKnown RBP22.7■■□□□ 1.22
LRCH3-208ENST00000443727 TEKT3Q9BXF9 490 aa22.7■■□□□ 1.22
LRCH3-208ENST00000443727 TSPYL2Q9H2G4 693 aaPredicted RBP22.7■■□□□ 1.22
LRCH3-208ENST00000443727 ORC3Q9UBD5 711 aaPredicted RBP22.7■■□□□ 1.22
LRCH3-208ENST00000443727 MAFBQ9Y5Q3 323 aaPredicted RBP22.7■■□□□ 1.22
LRCH3-208ENST00000443727 TRPV2Q9Y5S1 764 aa22.7■■□□□ 1.22
LRCH3-208ENST00000443727 COL1A2P08123 1366 aa22.7■■□□□ 1.22
LRCH3-208ENST00000443727 PTPRSQ13332 1948 aa22.69■■□□□ 1.22
LRCH3-208ENST00000443727 LOC101059915A0A1B0GWI6 518 aaPredicted RBP22.69■■□□□ 1.22
LRCH3-208ENST00000443727 DTNBO60941 627 aa22.69■■□□□ 1.22
LRCH3-208ENST00000443727 TDP2O95551 362 aa22.69■■□□□ 1.22
LRCH3-208ENST00000443727 Q4G0T1 1027 aa22.69■■□□□ 1.22
LRCH3-208ENST00000443727 SPRED2Q7Z698 418 aa22.69■■□□□ 1.22
LRCH3-208ENST00000443727 SLC5A5Q92911 643 aa22.69■■□□□ 1.22
LRCH3-208ENST00000443727 TOP1MTQ969P6 601 aa22.69■■□□□ 1.22
LRCH3-208ENST00000443727 PHF20Q9BVI0 1012 aa22.69■■□□□ 1.22
LRCH3-208ENST00000443727 DISC1Q9NRI5 854 aa22.69■■□□□ 1.22
LRCH3-208ENST00000443727 GINS2Q9Y248 185 aa22.69■■□□□ 1.22
LRCH3-208ENST00000443727 UNC80Q8N2C7 3258 aa22.69■■□□□ 1.22
LRCH3-208ENST00000443727 M0R2N6 131 aa22.68■■□□□ 1.22
LRCH3-208ENST00000443727 EDIL3O43854 480 aa22.68■■□□□ 1.22
LRCH3-208ENST00000443727 SEC24BO95487 1268 aa22.68■■□□□ 1.22
LRCH3-208ENST00000443727 ATP4AP20648 1035 aa22.68■■□□□ 1.22
LRCH3-208ENST00000443727 CD52P31358 61 aa22.68■■□□□ 1.22
LRCH3-208ENST00000443727 JAK3P52333 1124 aa22.68■■□□□ 1.22
LRCH3-208ENST00000443727 SKIV2LQ15477 1246 aaKnown RBP22.68■■□□□ 1.22
LRCH3-208ENST00000443727 NPY5RQ15761 445 aa22.68■■□□□ 1.22
LRCH3-208ENST00000443727 INF2Q27J81 1249 aa22.68■■□□□ 1.22
LRCH3-208ENST00000443727 IL17RAQ96F46 866 aa22.68■■□□□ 1.22
LRCH3-208ENST00000443727 FAM167AQ96KS9 214 aa22.68■■□□□ 1.22
LRCH3-208ENST00000443727 CELF4Q9BZC1 486 aaKnown RBP22.68■■□□□ 1.22
LRCH3-208ENST00000443727 CEP131Q9UPN4 1083 aa22.68■■□□□ 1.22
LRCH3-208ENST00000443727 MTCH2Q9Y6C9 303 aa22.68■■□□□ 1.22
LRCH3-208ENST00000443727 MICAL3Q7RTP6 2002 aa22.67■■□□□ 1.22
LRCH3-208ENST00000443727 CYP3A7-CYP3A51PA0A087WV96 503 aa22.67■■□□□ 1.22
LRCH3-208ENST00000443727 CTDNEP1O95476 244 aa22.67■■□□□ 1.22
LRCH3-208ENST00000443727 CYP3A7P24462 503 aa22.67■■□□□ 1.22
LRCH3-208ENST00000443727 SFNP31947 248 aa22.67■■□□□ 1.22
LRCH3-208ENST00000443727 ERVK-21P61565 698 aa22.67■■□□□ 1.22
LRCH3-208ENST00000443727 HTRA4P83105 476 aaPredicted RBP22.67■■□□□ 1.22
LRCH3-208ENST00000443727 PAK2Q13177 524 aa22.67■■□□□ 1.22
LRCH3-208ENST00000443727 GRB10Q13322 594 aa22.67■■□□□ 1.22
LRCH3-208ENST00000443727 ME3Q16798 604 aa22.67■■□□□ 1.22
LRCH3-208ENST00000443727 LETM2Q2VYF4 491 aa22.67■■□□□ 1.22
LRCH3-208ENST00000443727 METTL13Q8N6R0 699 aa22.67■■□□□ 1.22
LRCH3-208ENST00000443727 GTF3C6Q969F1 213 aa22.67■■□□□ 1.22
LRCH3-208ENST00000443727 GJA10Q969M2 543 aa22.67■■□□□ 1.22
LRCH3-208ENST00000443727 PRDM6Q9NQX0 595 aa22.67■■□□□ 1.22
LRCH3-208ENST00000443727 NRBP2Q9NSY0 501 aa22.67■■□□□ 1.22
LRCH3-208ENST00000443727 DDX25Q9UHL0 483 aaKnown RBP22.67■■□□□ 1.22
LRCH3-208ENST00000443727 SQORQ9Y6N5 450 aa22.67■■□□□ 1.22
LRCH3-208ENST00000443727 PRUNE2Q8WUY3 3088 aa22.66■■□□□ 1.22
LRCH3-208ENST00000443727 MOXD1Q6UVY6 613 aa22.66■■□□□ 1.22
LRCH3-208ENST00000443727 MIER3Q7Z3K6 550 aa22.66■■□□□ 1.22
LRCH3-208ENST00000443727 GDPD5Q8WTR4 605 aa22.66■■□□□ 1.22
LRCH3-208ENST00000443727 UNC45AQ9H3U1 944 aa22.66■■□□□ 1.22
LRCH3-208ENST00000443727 AGO3Q9H9G7 860 aaKnown RBP22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms