RNA–Protein interactions for RNA: ENST00000442892.2

SLC48A1-202, Transcript of solute carrier family 48 member 1, humanhuman

TSL 1 (best) BASIC

Gene SLC48A1, Length 1,024 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-202ENST00000442892 RRN3P2A6NIE6 340 aa13.72□□□□□ -0.21
SLC48A1-202ENST00000442892 ZBBXA8MT70 800 aa13.72□□□□□ -0.21
SLC48A1-202ENST00000442892 PITPNM1O00562 1244 aa13.72□□□□□ -0.21
SLC48A1-202ENST00000442892 HBP1O60381 514 aa13.72□□□□□ -0.21
SLC48A1-202ENST00000442892 OATP04181 439 aa13.72□□□□□ -0.21
SLC48A1-202ENST00000442892 OR52Z1P0C646 297 aa13.72□□□□□ -0.21
SLC48A1-202ENST00000442892 SELPP16109 830 aa13.72□□□□□ -0.21
SLC48A1-202ENST00000442892 CYP4A11Q02928 519 aa13.72□□□□□ -0.21
SLC48A1-202ENST00000442892 PPP2R5CQ13362 524 aa13.72□□□□□ -0.21
SLC48A1-202ENST00000442892 SHHQ15465 462 aa13.72□□□□□ -0.21
SLC48A1-202ENST00000442892 ZNF618Q5T7W0 954 aa13.72□□□□□ -0.21
SLC48A1-202ENST00000442892 RDM1Q8NG50 284 aa13.72□□□□□ -0.21
SLC48A1-202ENST00000442892 INTS4Q96HW7 963 aaKnown RBP13.72□□□□□ -0.21
SLC48A1-202ENST00000442892 FAM167AQ96KS9 214 aa13.72□□□□□ -0.21
SLC48A1-202ENST00000442892 TTC12Q9H892 705 aaPredicted RBP13.72□□□□□ -0.21
SLC48A1-202ENST00000442892 IL23AQ9NPF7 189 aa13.72□□□□□ -0.21
SLC48A1-202ENST00000442892 PCDHA12Q9UN75 941 aa13.72□□□□□ -0.21
SLC48A1-202ENST00000442892 PCDHB6Q9Y5E3 794 aa13.72□□□□□ -0.21
SLC48A1-202ENST00000442892 POTEMA6NI47 508 aa13.71□□□□□ -0.21
SLC48A1-202ENST00000442892 DDX11L8A8MPP1 907 aa13.71□□□□□ -0.21
SLC48A1-202ENST00000442892 IQCF3P0C7M6 154 aa13.71□□□□□ -0.21
SLC48A1-202ENST00000442892 ATP4AP20648 1035 aa13.71□□□□□ -0.21
SLC48A1-202ENST00000442892 BMP8BP34820 402 aa13.71□□□□□ -0.21
SLC48A1-202ENST00000442892 TRAPPC10P48553 1259 aa13.71□□□□□ -0.21
SLC48A1-202ENST00000442892 TMEM62Q0P6H9 643 aa13.71□□□□□ -0.21
SLC48A1-202ENST00000442892 TMEM266Q2M3C6 531 aa13.71□□□□□ -0.21
SLC48A1-202ENST00000442892 MTERF2Q49AM1 385 aa13.71□□□□□ -0.21
SLC48A1-202ENST00000442892 HABP4Q5JVS0 413 aaKnown RBP13.71□□□□□ -0.21
SLC48A1-202ENST00000442892 FOXD4L5Q5VV16 416 aaPredicted RBP13.71□□□□□ -0.21
SLC48A1-202ENST00000442892 PSRC1Q6PGN9 363 aaPredicted RBP13.71□□□□□ -0.21
SLC48A1-202ENST00000442892 ZNF365Q70YC5 407 aa13.71□□□□□ -0.21
SLC48A1-202ENST00000442892 OTOP2Q7RTS6 562 aa13.71□□□□□ -0.21
SLC48A1-202ENST00000442892 RSPH3Q86UC2 560 aa13.71□□□□□ -0.21
SLC48A1-202ENST00000442892 RPUSD2Q8IZ73 545 aaKnown RBP13.71□□□□□ -0.21
SLC48A1-202ENST00000442892 METTL13Q8N6R0 699 aa13.71□□□□□ -0.21
SLC48A1-202ENST00000442892 DNAJB3Q8WWF6 145 aa13.71□□□□□ -0.21
SLC48A1-202ENST00000442892 FOXD4L4Q8WXT5 416 aaPredicted RBP13.71□□□□□ -0.21
SLC48A1-202ENST00000442892 BBXQ8WY36 941 aaPredicted RBP13.71□□□□□ -0.21
SLC48A1-202ENST00000442892 DYDC2Q96IM9 177 aa13.71□□□□□ -0.21
SLC48A1-202ENST00000442892 PPP1R16BQ96T49 567 aa13.71□□□□□ -0.21
SLC48A1-202ENST00000442892 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.71□□□□□ -0.21
SLC48A1-202ENST00000442892 SH2D3AQ9BRG2 576 aa13.71□□□□□ -0.21
SLC48A1-202ENST00000442892 NRBP2Q9NSY0 501 aa13.71□□□□□ -0.21
SLC48A1-202ENST00000442892 MAFBQ9Y5Q3 323 aaPredicted RBP13.71□□□□□ -0.21
SLC48A1-202ENST00000442892 SIP14410 1827 aa13.71□□□□□ -0.22
SLC48A1-202ENST00000442892 ARID2Q68CP9 1835 aa13.71□□□□□ -0.22
SLC48A1-202ENST00000442892 MYH15Q9Y2K3 1946 aa13.7□□□□□ -0.22
SLC48A1-202ENST00000442892 TMEM150BA6NC51 233 aa13.7□□□□□ -0.22
SLC48A1-202ENST00000442892 RSPH10B2B2RC85 870 aa13.7□□□□□ -0.22
SLC48A1-202ENST00000442892 ZNF862O60290 1169 aa13.7□□□□□ -0.22
SLC48A1-202ENST00000442892 RSPH10BP0C881 870 aa13.7□□□□□ -0.22
SLC48A1-202ENST00000442892 SYT1P21579 422 aa13.7□□□□□ -0.22
SLC48A1-202ENST00000442892 KLRC1P26715 233 aa13.7□□□□□ -0.22
SLC48A1-202ENST00000442892 HOXC8P31273 242 aa13.7□□□□□ -0.22
SLC48A1-202ENST00000442892 TECP42680 631 aa13.7□□□□□ -0.22
SLC48A1-202ENST00000442892 TOB1P50616 345 aaPredicted RBP13.7□□□□□ -0.22
SLC48A1-202ENST00000442892 PSMC5P62195 406 aa13.7□□□□□ -0.22
SLC48A1-202ENST00000442892 CTTNQ14247 550 aaKnown RBP13.7□□□□□ -0.22
SLC48A1-202ENST00000442892 TRIM71Q2Q1W2 868 aaKnown RBP13.7□□□□□ -0.22
SLC48A1-202ENST00000442892 RILPL1Q5EBL4 403 aa13.7□□□□□ -0.22
SLC48A1-202ENST00000442892 ZNF484Q5JVG2 852 aa13.7□□□□□ -0.22
SLC48A1-202ENST00000442892 MARCH8Q5T0T0 291 aa13.7□□□□□ -0.22
SLC48A1-202ENST00000442892 PLA2G4FQ68DD2 849 aa13.7□□□□□ -0.22
SLC48A1-202ENST00000442892 TAF2Q6P1X5 1199 aa13.7□□□□□ -0.22
SLC48A1-202ENST00000442892 MTHFD1LQ6UB35 978 aa13.7□□□□□ -0.22
SLC48A1-202ENST00000442892 TPH2Q8IWU9 490 aa13.7□□□□□ -0.22
SLC48A1-202ENST00000442892 CCDC43Q96MW1 224 aaKnown RBP13.7□□□□□ -0.22
SLC48A1-202ENST00000442892 LXNQ9BS40 222 aa13.7□□□□□ -0.22
SLC48A1-202ENST00000442892 PRO3102Q9H379 93 aa13.7□□□□□ -0.22
SLC48A1-202ENST00000442892 RGL1Q9NZL6 768 aa13.7□□□□□ -0.22
SLC48A1-202ENST00000442892 CEP131Q9UPN4 1083 aa13.7□□□□□ -0.22
SLC48A1-202ENST00000442892 GINS2Q9Y248 185 aa13.7□□□□□ -0.22
SLC48A1-202ENST00000442892 COL1A2P08123 1366 aa13.7□□□□□ -0.22
SLC48A1-202ENST00000442892 RANBP2P49792 3224 aaKnown RBP13.69□□□□□ -0.22
SLC48A1-202ENST00000442892 M0QZ92 97 aa13.69□□□□□ -0.22
SLC48A1-202ENST00000442892 FGBP02675 491 aa13.69□□□□□ -0.22
SLC48A1-202ENST00000442892 RFC2P35250 354 aa13.69□□□□□ -0.22
SLC48A1-202ENST00000442892 QARSP47897 775 aaKnown RBP13.69□□□□□ -0.22
SLC48A1-202ENST00000442892 ADAM17P78536 824 aa13.69□□□□□ -0.22
SLC48A1-202ENST00000442892 PTGDRQ13258 359 aa13.69□□□□□ -0.22
SLC48A1-202ENST00000442892 ORC2Q13416 577 aaPredicted RBP13.69□□□□□ -0.22
SLC48A1-202ENST00000442892 EPHA7Q15375 998 aa13.69□□□□□ -0.22
SLC48A1-202ENST00000442892 TMEM240Q5SV17 173 aa13.69□□□□□ -0.22
SLC48A1-202ENST00000442892 B3GNT9Q6UX72 402 aa13.69□□□□□ -0.22
SLC48A1-202ENST00000442892 MTMR9Q96QG7 549 aa13.69□□□□□ -0.22
SLC48A1-202ENST00000442892 EIF2AK1Q9BQI3 630 aaKnown RBP13.69□□□□□ -0.22
SLC48A1-202ENST00000442892 MTIF3Q9H2K0 278 aaKnown RBP13.69□□□□□ -0.22
SLC48A1-202ENST00000442892 BMP2KQ9NSY1 1161 aaPredicted RBP13.69□□□□□ -0.22
SLC48A1-202ENST00000442892 GBF1Q92538 1859 aa13.69□□□□□ -0.22
SLC48A1-202ENST00000442892 MBLAC1A4D2B0 266 aaPredicted RBP13.68□□□□□ -0.22
SLC48A1-202ENST00000442892 STX6O43752 255 aa13.68□□□□□ -0.22
SLC48A1-202ENST00000442892 DKC1O60832 514 aaKnown RBP eCLIP13.68□□□□□ -0.22
SLC48A1-202ENST00000442892 P4HBP07237 508 aaKnown RBP13.68□□□□□ -0.22
SLC48A1-202ENST00000442892 ACTN1P12814 892 aa13.68□□□□□ -0.22
SLC48A1-202ENST00000442892 CLCN3P51790 818 aa13.68□□□□□ -0.22
SLC48A1-202ENST00000442892 SPIRE1Q08AE8 756 aa13.68□□□□□ -0.22
SLC48A1-202ENST00000442892 TBC1D8BQ0IIM8 1120 aa13.68□□□□□ -0.22
SLC48A1-202ENST00000442892 XKR3Q5GH77 459 aa13.68□□□□□ -0.22
SLC48A1-202ENST00000442892 C16orf59Q7L2K0 433 aa13.68□□□□□ -0.22
SLC48A1-202ENST00000442892 BRAPQ7Z569 592 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms