RNA–Protein interactions for RNA: ENST00000441871.5

R3HDM1-209, Transcript of R3H domain containing 1, humanhuman

TSL 4

Gene R3HDM1, Length 556 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-209ENST00000441871 PCP11498 1178 aaKnown RBP4.38□□□□□ -1.71
R3HDM1-209ENST00000441871 ALAS1P13196 640 aa4.38□□□□□ -1.71
R3HDM1-209ENST00000441871 ATP4AP20648 1035 aa4.38□□□□□ -1.71
R3HDM1-209ENST00000441871 ATP5F1P24539 256 aaPredicted RBP4.38□□□□□ -1.71
R3HDM1-209ENST00000441871 MCM4P33991 863 aa4.38□□□□□ -1.71
R3HDM1-209ENST00000441871 EPS15P42566 896 aa4.38□□□□□ -1.71
R3HDM1-209ENST00000441871 PSMC4P43686 418 aa4.38□□□□□ -1.71
R3HDM1-209ENST00000441871 CTCFP49711 727 aaPredicted RBP4.38□□□□□ -1.71
R3HDM1-209ENST00000441871 YARSP54577 528 aaKnown RBP4.38□□□□□ -1.71
R3HDM1-209ENST00000441871 USP14P54578 494 aa4.38□□□□□ -1.71
R3HDM1-209ENST00000441871 GPR85P60893 370 aa4.38□□□□□ -1.71
R3HDM1-209ENST00000441871 NUCB2P80303 420 aa4.38□□□□□ -1.71
R3HDM1-209ENST00000441871 TMPRSS15P98073 1019 aa4.38□□□□□ -1.71
R3HDM1-209ENST00000441871 KLHL30Q0D2K2 578 aa4.38□□□□□ -1.71
R3HDM1-209ENST00000441871 NMIQ13287 307 aaPredicted RBP4.38□□□□□ -1.71
R3HDM1-209ENST00000441871 SMAD4Q13485 552 aaKnown RBP4.38□□□□□ -1.71
R3HDM1-209ENST00000441871 MLECQ14165 292 aa4.38□□□□□ -1.71
R3HDM1-209ENST00000441871 INAQ16352 499 aa4.38□□□□□ -1.71
R3HDM1-209ENST00000441871 GEN1Q17RS7 908 aa4.38□□□□□ -1.71
R3HDM1-209ENST00000441871 PLA2G4EQ3MJ16 856 aa4.38□□□□□ -1.71
R3HDM1-209ENST00000441871 CEP135Q66GS9 1140 aa4.38□□□□□ -1.71
R3HDM1-209ENST00000441871 LIN54Q6MZP7 749 aa4.38□□□□□ -1.71
R3HDM1-209ENST00000441871 PLEKHM3Q6ZWE6 761 aa4.38□□□□□ -1.71
R3HDM1-209ENST00000441871 INTS8Q75QN2 995 aaKnown RBP4.38□□□□□ -1.71
R3HDM1-209ENST00000441871 PDZD4Q76G19 769 aaPredicted RBP4.38□□□□□ -1.71
R3HDM1-209ENST00000441871 LURAP1LQ8IV03 231 aa4.38□□□□□ -1.71
R3HDM1-209ENST00000441871 TRMT2AQ8IZ69 625 aaKnown RBP4.38□□□□□ -1.71
R3HDM1-209ENST00000441871 TMEM57Q8N5G2 664 aa4.38□□□□□ -1.71
R3HDM1-209ENST00000441871 PCYOX1LQ8NBM8 494 aa4.38□□□□□ -1.71
R3HDM1-209ENST00000441871 FAM76AQ8TAV0 307 aa4.38□□□□□ -1.71
R3HDM1-209ENST00000441871 ACMSDQ8TDX5 336 aa4.38□□□□□ -1.71
R3HDM1-209ENST00000441871 DENND1AQ8TEH3 1009 aa4.38□□□□□ -1.71
R3HDM1-209ENST00000441871 ANKRD24Q8TF21 1146 aa4.38□□□□□ -1.71
R3HDM1-209ENST00000441871 COG1Q8WTW3 980 aa4.38□□□□□ -1.71
R3HDM1-209ENST00000441871 USP13Q92995 863 aaPredicted RBP4.38□□□□□ -1.71
R3HDM1-209ENST00000441871 SCARF2Q96GP6 870 aaPredicted RBP4.38□□□□□ -1.71
R3HDM1-209ENST00000441871 EPSTI1Q96J88 318 aa4.38□□□□□ -1.71
R3HDM1-209ENST00000441871 CEP295NLQ96MC4 621 aa4.38□□□□□ -1.71
R3HDM1-209ENST00000441871 MFSD14AQ96MC6 490 aa4.38□□□□□ -1.71
R3HDM1-209ENST00000441871 RUSC1Q9BVN2 902 aa4.38□□□□□ -1.71
R3HDM1-209ENST00000441871 HERC2P3Q9BVR0 1158 aa4.38□□□□□ -1.71
R3HDM1-209ENST00000441871 TTLL2Q9BWV7 592 aa4.38□□□□□ -1.71
R3HDM1-209ENST00000441871 EDEM3Q9BZQ6 932 aa4.38□□□□□ -1.71
R3HDM1-209ENST00000441871 SAP130Q9H0E3 1048 aa4.38□□□□□ -1.71
R3HDM1-209ENST00000441871 PNNQ9H307 717 aaKnown RBP4.38□□□□□ -1.71
R3HDM1-209ENST00000441871 MCM9Q9NXL9 1143 aa4.38□□□□□ -1.71
R3HDM1-209ENST00000441871 HECAQ9UBI9 543 aaPredicted RBP4.38□□□□□ -1.71
R3HDM1-209ENST00000441871 KIF3AQ9Y496 699 aa4.38□□□□□ -1.71
R3HDM1-209ENST00000441871 ZNF804BA4D1E1 1349 aa4.38□□□□□ -1.71
R3HDM1-209ENST00000441871 SMARCA2P51531 1590 aa4.37□□□□□ -1.71
R3HDM1-209ENST00000441871 CYP2D7A0A087X1C5 515 aa4.37□□□□□ -1.71
R3HDM1-209ENST00000441871 LRRC72A6NJI9 287 aa4.37□□□□□ -1.71
R3HDM1-209ENST00000441871 UBXN8O00124 270 aa4.37□□□□□ -1.71
R3HDM1-209ENST00000441871 CACNB4O00305 520 aaPredicted RBP4.37□□□□□ -1.71
R3HDM1-209ENST00000441871 EIF1AYO14602 144 aaKnown RBP4.37□□□□□ -1.71
R3HDM1-209ENST00000441871 GIPC1O14908 333 aa4.37□□□□□ -1.71
R3HDM1-209ENST00000441871 TSPAN3O60637 253 aa4.37□□□□□ -1.71
R3HDM1-209ENST00000441871 SOCS5O75159 536 aa4.37□□□□□ -1.71
R3HDM1-209ENST00000441871 SLITRK5O94991 958 aa4.37□□□□□ -1.71
R3HDM1-209ENST00000441871 ASGR2P07307 311 aa4.37□□□□□ -1.71
R3HDM1-209ENST00000441871 MYCLP12524 364 aaPredicted RBP4.37□□□□□ -1.71
R3HDM1-209ENST00000441871 BMP4P12644 408 aa4.37□□□□□ -1.71
R3HDM1-209ENST00000441871 RHCEP18577 417 aa4.37□□□□□ -1.71
R3HDM1-209ENST00000441871 HDCP19113 662 aa4.37□□□□□ -1.71
R3HDM1-209ENST00000441871 S100A5P33763 92 aa4.37□□□□□ -1.71
R3HDM1-209ENST00000441871 HSD17B2P37059 387 aa4.37□□□□□ -1.71
R3HDM1-209ENST00000441871 ATP5OP48047 213 aa4.37□□□□□ -1.71
R3HDM1-209ENST00000441871 PEX5P50542 639 aa4.37□□□□□ -1.71
R3HDM1-209ENST00000441871 CLCN2P51788 898 aa4.37□□□□□ -1.71
R3HDM1-209ENST00000441871 IRX1P78414 480 aaPredicted RBP4.37□□□□□ -1.71
R3HDM1-209ENST00000441871 RHDQ02161 417 aa4.37□□□□□ -1.71
R3HDM1-209ENST00000441871 BTKQ06187 659 aa4.37□□□□□ -1.71
R3HDM1-209ENST00000441871 ORC1Q13415 861 aa4.37□□□□□ -1.71
R3HDM1-209ENST00000441871 PRKG1Q13976 671 aa4.37□□□□□ -1.71
R3HDM1-209ENST00000441871 COG2Q14746 738 aa4.37□□□□□ -1.71
R3HDM1-209ENST00000441871 ABCB5Q2M3G0 1257 aa4.37□□□□□ -1.71
R3HDM1-209ENST00000441871 PROSER3Q2NL68 480 aa4.37□□□□□ -1.71
R3HDM1-209ENST00000441871 BOLA3Q53S33 107 aa4.37□□□□□ -1.71
R3HDM1-209ENST00000441871 CCDC183Q5T5S1 534 aa4.37□□□□□ -1.71
R3HDM1-209ENST00000441871 SFMBT2Q5VUG0 894 aa4.37□□□□□ -1.71
R3HDM1-209ENST00000441871 ZNF385CQ66K41 422 aaPredicted RBP4.37□□□□□ -1.71
R3HDM1-209ENST00000441871 KAZNQ674X7 775 aa4.37□□□□□ -1.71
R3HDM1-209ENST00000441871 GPR139Q6DWJ6 353 aa4.37□□□□□ -1.71
R3HDM1-209ENST00000441871 RAB12Q6IQ22 244 aa4.37□□□□□ -1.71
R3HDM1-209ENST00000441871 LPCAT2Q7L5N7 544 aa4.37□□□□□ -1.71
R3HDM1-209ENST00000441871 CHST15Q7LFX5 561 aaPredicted RBP4.37□□□□□ -1.71
R3HDM1-209ENST00000441871 NUP54Q7Z3B4 507 aa4.37□□□□□ -1.71
R3HDM1-209ENST00000441871 GALNT7Q86SF2 657 aa4.37□□□□□ -1.71
R3HDM1-209ENST00000441871 TMEM110Q86TL2 294 aa4.37□□□□□ -1.71
R3HDM1-209ENST00000441871 CCDC84Q86UT8 332 aaPredicted RBP4.37□□□□□ -1.71
R3HDM1-209ENST00000441871 TRIM42Q8IWZ5 723 aa4.37□□□□□ -1.71
R3HDM1-209ENST00000441871 SLC7A5P1Q8MH63 180 aa4.37□□□□□ -1.71
R3HDM1-209ENST00000441871 CPA6Q8N4T0 437 aa4.37□□□□□ -1.71
R3HDM1-209ENST00000441871 GBP7Q8N8V2 638 aaPredicted RBP4.37□□□□□ -1.71
R3HDM1-209ENST00000441871 SERBP1Q8NC51 408 aaKnown RBP eCLIP4.37□□□□□ -1.71
R3HDM1-209ENST00000441871 TSEN2Q8NCE0 465 aaKnown RBP4.37□□□□□ -1.71
R3HDM1-209ENST00000441871 GOT1L1Q8NHS2 421 aaPredicted RBP4.37□□□□□ -1.71
R3HDM1-209ENST00000441871 ZBTB9Q96C00 473 aa4.37□□□□□ -1.71
R3HDM1-209ENST00000441871 LRRC45Q96CN5 670 aa4.37□□□□□ -1.71
R3HDM1-209ENST00000441871 NRBF2Q96F24 287 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms