RNA–Protein interactions for RNA: ENST00000441821.5

SYN3-204, Transcript of synapsin III, humanhuman

TSL 1 (best)

Gene SYN3, Length 855 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-204ENST00000441821 RASGRP4Q8TDF6 673 aa11.52□□□□□ -0.57
SYN3-204ENST00000441821 SMARCAD1Q9H4L7 1026 aa11.52□□□□□ -0.57
SYN3-204ENST00000441821 NR2E1Q9Y466 385 aa11.52□□□□□ -0.57
SYN3-204ENST00000441821 TRPV2Q9Y5S1 764 aa11.52□□□□□ -0.57
SYN3-204ENST00000441821 IGSF9BQ9UPX0 1349 aa11.52□□□□□ -0.57
SYN3-204ENST00000441821 M0QZ92 97 aa11.51□□□□□ -0.57
SYN3-204ENST00000441821 FSCN2O14926 492 aa11.51□□□□□ -0.57
SYN3-204ENST00000441821 CYTH3O43739 400 aa11.51□□□□□ -0.57
SYN3-204ENST00000441821 ATP9AO75110 1047 aa11.51□□□□□ -0.57
SYN3-204ENST00000441821 FGF18O76093 207 aa11.51□□□□□ -0.57
SYN3-204ENST00000441821 KCNA2P16389 499 aa11.51□□□□□ -0.57
SYN3-204ENST00000441821 HOXB8P17481 243 aaPredicted RBP11.51□□□□□ -0.57
SYN3-204ENST00000441821 MARK3P27448 753 aa11.51□□□□□ -0.57
SYN3-204ENST00000441821 TECP42680 631 aa11.51□□□□□ -0.57
SYN3-204ENST00000441821 ID4P47928 161 aa11.51□□□□□ -0.57
SYN3-204ENST00000441821 SARSP49591 514 aaKnown RBP11.51□□□□□ -0.57
SYN3-204ENST00000441821 GATMP50440 423 aa11.51□□□□□ -0.57
SYN3-204ENST00000441821 ERVFC1P60507 584 aa11.51□□□□□ -0.57
SYN3-204ENST00000441821 PAK2Q13177 524 aa11.51□□□□□ -0.57
SYN3-204ENST00000441821 MTMR3Q13615 1198 aa11.51□□□□□ -0.57
SYN3-204ENST00000441821 GRM4Q14833 912 aa11.51□□□□□ -0.57
SYN3-204ENST00000441821 SYCE2Q6PIF2 218 aa11.51□□□□□ -0.57
SYN3-204ENST00000441821 TMEM105Q8N8V8 129 aa11.51□□□□□ -0.57
SYN3-204ENST00000441821 GLG1Q92896 1179 aa11.51□□□□□ -0.57
SYN3-204ENST00000441821 RILPL2Q969X0 211 aa11.51□□□□□ -0.57
SYN3-204ENST00000441821 CDHR1Q96JP9 859 aa11.51□□□□□ -0.57
SYN3-204ENST00000441821 FAM49AQ9H0Q0 323 aaPredicted RBP11.51□□□□□ -0.57
SYN3-204ENST00000441821 TMX1Q9H3N1 280 aa11.51□□□□□ -0.57
SYN3-204ENST00000441821 RNF216Q9NWF9 866 aaPredicted RBP11.51□□□□□ -0.57
SYN3-204ENST00000441821 SORCS3Q9UPU3 1222 aa11.51□□□□□ -0.57
SYN3-204ENST00000441821 PCDHB7Q9Y5E2 793 aa11.51□□□□□ -0.57
SYN3-204ENST00000441821 ZNF292O60281 2723 aa11.5□□□□□ -0.57
SYN3-204ENST00000441821 PIK3CDO00329 1044 aa11.5□□□□□ -0.57
SYN3-204ENST00000441821 BRD1O95696 1058 aa11.5□□□□□ -0.57
SYN3-204ENST00000441821 INSRRP14616 1297 aa11.5□□□□□ -0.57
SYN3-204ENST00000441821 IGBP1P78318 339 aa11.5□□□□□ -0.57
SYN3-204ENST00000441821 SPOUT1Q5T280 376 aaKnown RBP11.5□□□□□ -0.57
SYN3-204ENST00000441821 MCTP2Q6DN12 878 aa11.5□□□□□ -0.57
SYN3-204ENST00000441821 ASTLQ6HA08 431 aaPredicted RBP11.5□□□□□ -0.57
SYN3-204ENST00000441821 NME8Q8N427 588 aa11.5□□□□□ -0.57
SYN3-204ENST00000441821 TNPO1Q92973 898 aaKnown RBP11.5□□□□□ -0.57
SYN3-204ENST00000441821 NKD2Q969F2 451 aaPredicted RBP11.5□□□□□ -0.57
SYN3-204ENST00000441821 GPRASP2Q96D09 838 aa11.5□□□□□ -0.57
SYN3-204ENST00000441821 ZBTB10Q96DT7 871 aa11.5□□□□□ -0.57
SYN3-204ENST00000441821 DSCC1Q9BVC3 393 aa11.5□□□□□ -0.57
SYN3-204ENST00000441821 CELF4Q9BZC1 486 aaKnown RBP11.5□□□□□ -0.57
SYN3-204ENST00000441821 TMEM260Q9NX78 707 aa11.5□□□□□ -0.57
SYN3-204ENST00000441821 LZTS1Q9Y250 596 aa11.5□□□□□ -0.57
SYN3-204ENST00000441821 PCDHA2Q9Y5H9 948 aa11.5□□□□□ -0.57
SYN3-204ENST00000441821 KDM3AQ9Y4C1 1321 aa11.5□□□□□ -0.57
SYN3-204ENST00000441821 TBKBP1A7MCY6 615 aa11.49□□□□□ -0.57
SYN3-204ENST00000441821 SP100P23497 879 aaPredicted RBP11.49□□□□□ -0.57
SYN3-204ENST00000441821 CLCN5P51795 746 aa11.49□□□□□ -0.57
SYN3-204ENST00000441821 PLCB3Q01970 1234 aa11.49□□□□□ -0.57
SYN3-204ENST00000441821 TMEM62Q0P6H9 643 aa11.49□□□□□ -0.57
SYN3-204ENST00000441821 CWC27Q6UX04 472 aaKnown RBP11.49□□□□□ -0.57
SYN3-204ENST00000441821 FRMD5Q7Z6J6 570 aa11.49□□□□□ -0.57
SYN3-204ENST00000441821 THNSL1Q8IYQ7 743 aa11.49□□□□□ -0.57
SYN3-204ENST00000441821 ADSSL1Q8N142 457 aa11.49□□□□□ -0.57
SYN3-204ENST00000441821 COLGALT1Q8NBJ5 622 aa11.49□□□□□ -0.57
SYN3-204ENST00000441821 SMARCC2Q8TAQ2 1214 aa11.49□□□□□ -0.57
SYN3-204ENST00000441821 CUL5Q93034 780 aa11.49□□□□□ -0.57
SYN3-204ENST00000441821 NECTIN4Q96NY8 510 aa11.49□□□□□ -0.57
SYN3-204ENST00000441821 APOL5Q9BWW9 433 aa11.49□□□□□ -0.57
SYN3-204ENST00000441821 NGRNQ9NPE2 291 aaKnown RBP11.49□□□□□ -0.57
SYN3-204ENST00000441821 TSHZ2Q9NRE2 1034 aa11.49□□□□□ -0.57
SYN3-204ENST00000441821 TYW1Q9NV66 732 aaKnown RBP11.49□□□□□ -0.57
SYN3-204ENST00000441821 PUF60Q9UHX1 559 aaKnown RBP11.49□□□□□ -0.57
SYN3-204ENST00000441821 FNDC1Q4ZHG4 1894 aaPredicted RBP11.49□□□□□ -0.57
SYN3-204ENST00000441821 PTPRZ1P23471 2315 aaPredicted RBP11.48□□□□□ -0.57
SYN3-204ENST00000441821 MEIS2O14770 477 aa11.48□□□□□ -0.57
SYN3-204ENST00000441821 ITGB5P18084 799 aa11.48□□□□□ -0.57
SYN3-204ENST00000441821 LAG3P18627 525 aa11.48□□□□□ -0.57
SYN3-204ENST00000441821 KRT76Q01546 638 aa11.48□□□□□ -0.57
SYN3-204ENST00000441821 ITIH3Q06033 890 aa11.48□□□□□ -0.57
SYN3-204ENST00000441821 TROAPQ12815 778 aa11.48□□□□□ -0.57
SYN3-204ENST00000441821 NFX1Q12986 1120 aaKnown RBP11.48□□□□□ -0.57
SYN3-204ENST00000441821 FAM102BQ5T8I3 360 aa11.48□□□□□ -0.57
SYN3-204ENST00000441821 PLPP4Q5VZY2 271 aa11.48□□□□□ -0.57
SYN3-204ENST00000441821 USP17L6PQ6QN14 398 aa11.48□□□□□ -0.57
SYN3-204ENST00000441821 CYB5R4Q7L1T6 521 aa11.48□□□□□ -0.57
SYN3-204ENST00000441821 MRPS27Q92552 414 aaKnown RBP11.48□□□□□ -0.57
SYN3-204ENST00000441821 CWH43Q9H720 699 aa11.48□□□□□ -0.57
SYN3-204ENST00000441821 RGS18Q9NS28 235 aa11.48□□□□□ -0.57
SYN3-204ENST00000441821 C1orf112Q9NSG2 853 aa11.48□□□□□ -0.57
SYN3-204ENST00000441821 CACNA1AO00555 2505 aa11.47□□□□□ -0.57
SYN3-204ENST00000441821 SMIM35A0A1B0GVV1 85 aa11.47□□□□□ -0.57
SYN3-204ENST00000441821 HIDE1A8MVS5 230 aa11.47□□□□□ -0.57
SYN3-204ENST00000441821 C2CD4DB7Z1M9 353 aa11.47□□□□□ -0.57
SYN3-204ENST00000441821 C9IYK1 514 aa11.47□□□□□ -0.57
SYN3-204ENST00000441821 MAFGO15525 162 aa11.47□□□□□ -0.57
SYN3-204ENST00000441821 MGEA5O60502 916 aa11.47□□□□□ -0.57
SYN3-204ENST00000441821 APOBRQ0VD83 1088 aa11.47□□□□□ -0.57
SYN3-204ENST00000441821 MTMR1Q13613 665 aa11.47□□□□□ -0.57
SYN3-204ENST00000441821 TMEM266Q2M3C6 531 aa11.47□□□□□ -0.57
SYN3-204ENST00000441821 TPRNQ4KMQ1 711 aa11.47□□□□□ -0.57
SYN3-204ENST00000441821 CES5AQ6NT32 575 aa11.47□□□□□ -0.57
SYN3-204ENST00000441821 LLGL2Q6P1M3 1020 aa11.47□□□□□ -0.57
SYN3-204ENST00000441821 SLC24A5Q71RS6 500 aa11.47□□□□□ -0.57
SYN3-204ENST00000441821 CASP10Q92851 521 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms