RNA–Protein interactions for RNA: ENST00000441730.2

BRPF3-204, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 5

Gene BRPF3, Length 3,329 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-204ENST00000441730 FAM217BQ9NTX9 383 aaPredicted RBP11.38□□□□□ -0.59
BRPF3-204ENST00000441730 MAD2L2Q9UI95 211 aa11.38□□□□□ -0.59
BRPF3-204ENST00000441730 SSX2IPQ9Y2D8 614 aa11.38□□□□□ -0.59
BRPF3-204ENST00000441730 CYTH3O43739 400 aa11.38□□□□□ -0.59
BRPF3-204ENST00000441730 NPM3O75607 178 aaKnown RBP11.38□□□□□ -0.59
BRPF3-204ENST00000441730 SEC31AO94979 1220 aaKnown RBP11.38□□□□□ -0.59
BRPF3-204ENST00000441730 GNAT1P11488 350 aa11.38□□□□□ -0.59
BRPF3-204ENST00000441730 ZNF543Q08ER8 600 aa11.38□□□□□ -0.59
BRPF3-204ENST00000441730 NR5A1Q13285 461 aa11.38□□□□□ -0.59
BRPF3-204ENST00000441730 C4orf46Q504U0 113 aa11.38□□□□□ -0.59
BRPF3-204ENST00000441730 SENP7Q9BQF6 1050 aa11.38□□□□□ -0.59
BRPF3-204ENST00000441730 IFT122Q9HBG6 1241 aa11.38□□□□□ -0.59
BRPF3-204ENST00000441730 PKD2L1Q9P0L9 805 aa11.38□□□□□ -0.59
BRPF3-204ENST00000441730 TMX2Q9Y320 296 aa11.38□□□□□ -0.59
BRPF3-204ENST00000441730 TMED5Q9Y3A6 229 aa11.38□□□□□ -0.59
BRPF3-204ENST00000441730 PPP2R3BQ9Y5P8 575 aa11.38□□□□□ -0.59
BRPF3-204ENST00000441730 BZW2Q9Y6E2 419 aaKnown RBP11.38□□□□□ -0.59
BRPF3-204ENST00000441730 PITPNM2Q9BZ72 1349 aa11.38□□□□□ -0.59
BRPF3-204ENST00000441730 STX6O43752 255 aa11.37□□□□□ -0.59
BRPF3-204ENST00000441730 IBSPP21815 317 aaPredicted RBP11.37□□□□□ -0.59
BRPF3-204ENST00000441730 PTGS1P23219 599 aa11.37□□□□□ -0.59
BRPF3-204ENST00000441730 ARHGEF6Q15052 776 aa11.37□□□□□ -0.59
BRPF3-204ENST00000441730 UBE2SQ16763 222 aa11.37□□□□□ -0.59
BRPF3-204ENST00000441730 TMTC3Q6ZXV5 915 aa11.37□□□□□ -0.59
BRPF3-204ENST00000441730 WDR75Q8IWA0 830 aaKnown RBP11.37□□□□□ -0.59
BRPF3-204ENST00000441730 PLPP6Q8IY26 295 aa11.37□□□□□ -0.59
BRPF3-204ENST00000441730 KLC4Q9NSK0 619 aa11.37□□□□□ -0.59
BRPF3-204ENST00000441730 PHF24Q9UPV7 400 aa11.37□□□□□ -0.59
BRPF3-204ENST00000441730 MYH1P12882 1939 aa11.37□□□□□ -0.59
BRPF3-204ENST00000441730 BTBD18B2RXH4 712 aa11.37□□□□□ -0.59
BRPF3-204ENST00000441730 USP17L15C9J2P7 530 aa11.37□□□□□ -0.59
BRPF3-204ENST00000441730 USP17L13C9JLJ4 530 aa11.37□□□□□ -0.59
BRPF3-204ENST00000441730 USP17L11C9JVI0 530 aa11.37□□□□□ -0.59
BRPF3-204ENST00000441730 USP17L18D6R9N7 530 aa11.37□□□□□ -0.59
BRPF3-204ENST00000441730 USP17L22D6RA61 530 aa11.37□□□□□ -0.59
BRPF3-204ENST00000441730 USP17L17D6RBQ6 530 aa11.37□□□□□ -0.59
BRPF3-204ENST00000441730 USP17L19D6RCP7 530 aa11.37□□□□□ -0.59
BRPF3-204ENST00000441730 USP17L20D6RJB6 530 aa11.37□□□□□ -0.59
BRPF3-204ENST00000441730 P4HA2O15460 535 aa11.37□□□□□ -0.59
BRPF3-204ENST00000441730 NDUFB5O43674 189 aa11.37□□□□□ -0.59
BRPF3-204ENST00000441730 SMNDC1O75940 238 aaKnown RBP eCLIP11.37□□□□□ -0.59
BRPF3-204ENST00000441730 FSBPO95073 299 aa11.37□□□□□ -0.59
BRPF3-204ENST00000441730 FGRP09769 529 aa11.37□□□□□ -0.59
BRPF3-204ENST00000441730 CALML3P27482 149 aa11.37□□□□□ -0.59
BRPF3-204ENST00000441730 USP17L24Q0WX57 530 aa11.37□□□□□ -0.59
BRPF3-204ENST00000441730 DYNC1I2Q13409 638 aaKnown RBP11.37□□□□□ -0.59
BRPF3-204ENST00000441730 QRICH1Q2TAL8 776 aa11.37□□□□□ -0.59
BRPF3-204ENST00000441730 SYDE2Q5VT97 1194 aa11.37□□□□□ -0.59
BRPF3-204ENST00000441730 USP17L6PQ6QN14 398 aa11.37□□□□□ -0.59
BRPF3-204ENST00000441730 ZMAT2Q96NC0 199 aaKnown RBP11.37□□□□□ -0.59
BRPF3-204ENST00000441730 SYNCQ9H7C4 482 aa11.37□□□□□ -0.59
BRPF3-204ENST00000441730 L2HGDHQ9H9P8 463 aa11.37□□□□□ -0.59
BRPF3-204ENST00000441730 PGAP2Q9UHJ9 254 aa11.37□□□□□ -0.59
BRPF3-204ENST00000441730 CCPG1Q9ULG6 757 aa11.37□□□□□ -0.59
BRPF3-204ENST00000441730 PRR12Q9ULL5 1215 aa11.37□□□□□ -0.59
BRPF3-204ENST00000441730 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.37□□□□□ -0.59
BRPF3-204ENST00000441730 GMEB1Q9Y692 573 aa11.37□□□□□ -0.59
BRPF3-204ENST00000441730 H3BQF6 201 aa11.37□□□□□ -0.59
BRPF3-204ENST00000441730 TBC1D12O60347 775 aa11.37□□□□□ -0.59
BRPF3-204ENST00000441730 DDAH1O94760 285 aa11.37□□□□□ -0.59
BRPF3-204ENST00000441730 SLC8A1P32418 973 aa11.37□□□□□ -0.59
BRPF3-204ENST00000441730 GNAQP50148 359 aa11.37□□□□□ -0.59
BRPF3-204ENST00000441730 WASHC5Q12768 1159 aa11.37□□□□□ -0.59
BRPF3-204ENST00000441730 KRT40Q6A162 431 aa11.37□□□□□ -0.59
BRPF3-204ENST00000441730 SMARCC2Q8TAQ2 1214 aa11.37□□□□□ -0.59
BRPF3-204ENST00000441730 CENPTQ96BT3 561 aa11.37□□□□□ -0.59
BRPF3-204ENST00000441730 ZWILCHQ9H900 591 aa11.37□□□□□ -0.59
BRPF3-204ENST00000441730 ATXN2Q99700 1313 aaKnown RBP11.36□□□□□ -0.59
BRPF3-204ENST00000441730 FDPSP14324 419 aaKnown RBP11.36□□□□□ -0.59
BRPF3-204ENST00000441730 CNGA3Q16281 694 aa11.36□□□□□ -0.59
BRPF3-204ENST00000441730 ANKRD13CQ8N6S4 541 aa11.36□□□□□ -0.59
BRPF3-204ENST00000441730 CHURC1Q8WUH1 139 aa11.36□□□□□ -0.59
BRPF3-204ENST00000441730 GSDMAQ96QA5 445 aa11.36□□□□□ -0.59
BRPF3-204ENST00000441730 P2RX7Q99572 595 aaKnown RBP11.36□□□□□ -0.59
BRPF3-204ENST00000441730 FTOQ9C0B1 505 aaKnown RBP eCLIP11.36□□□□□ -0.59
BRPF3-204ENST00000441730 NRDE2Q9H7Z3 1164 aa11.36□□□□□ -0.59
BRPF3-204ENST00000441730 PCDH18Q9HCL0 1135 aa11.36□□□□□ -0.59
BRPF3-204ENST00000441730 ARFGAP3Q9NP61 516 aa11.36□□□□□ -0.59
BRPF3-204ENST00000441730 TMEM88BA6NKF7 163 aa11.36□□□□□ -0.59
BRPF3-204ENST00000441730 MTA2O94776 668 aa11.36□□□□□ -0.59
BRPF3-204ENST00000441730 CHMP4BP1P59074 171 aa11.36□□□□□ -0.59
BRPF3-204ENST00000441730 CBX3Q13185 183 aa11.36□□□□□ -0.59
BRPF3-204ENST00000441730 CCSAPQ6IQ19 270 aaPredicted RBP11.36□□□□□ -0.59
BRPF3-204ENST00000441730 EEPD1Q7L9B9 569 aa11.36□□□□□ -0.59
BRPF3-204ENST00000441730 ZBTB8BQ8NAP8 495 aaPredicted RBP11.36□□□□□ -0.59
BRPF3-204ENST00000441730 OXER1Q8TDS5 423 aa11.36□□□□□ -0.59
BRPF3-204ENST00000441730 JMJD4Q9H9V9 463 aa11.36□□□□□ -0.59
BRPF3-204ENST00000441730 CPA4Q9UI42 421 aa11.36□□□□□ -0.59
BRPF3-204ENST00000441730 SMCO2A6NFE2 343 aa11.35□□□□□ -0.59
BRPF3-204ENST00000441730 LIN7AO14910 233 aaPredicted RBP11.35□□□□□ -0.59
BRPF3-204ENST00000441730 EVI5O60447 810 aa11.35□□□□□ -0.59
BRPF3-204ENST00000441730 KIAA0754O94854 1291 aa11.35□□□□□ -0.59
BRPF3-204ENST00000441730 GJA5P36382 358 aa11.35□□□□□ -0.59
BRPF3-204ENST00000441730 FNTAP49354 379 aa11.35□□□□□ -0.59
BRPF3-204ENST00000441730 ACTN3Q08043 901 aaPredicted RBP11.35□□□□□ -0.59
BRPF3-204ENST00000441730 GRM4Q14833 912 aa11.35□□□□□ -0.59
BRPF3-204ENST00000441730 GPATCH4Q5T3I0 446 aaKnown RBP11.35□□□□□ -0.59
BRPF3-204ENST00000441730 NCCRP1Q6ZVX7 275 aaPredicted RBP11.35□□□□□ -0.59
BRPF3-204ENST00000441730 DCLK2Q8N568 766 aa11.35□□□□□ -0.59
BRPF3-204ENST00000441730 PURBQ96QR8 312 aaKnown RBP11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms