RNA–Protein interactions for RNA: ENST00000441123.1

BRPF3-203, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 1 (best)

Gene BRPF3, Length 5,380 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-203ENST00000441123 C7orf25Q9BPX7 421 aa13.91□□□□□ -0.18
BRPF3-203ENST00000441123 TBC1D22BQ9NU19 505 aa13.91□□□□□ -0.18
BRPF3-203ENST00000441123 TTC26A0AVF1 554 aa13.91□□□□□ -0.18
BRPF3-203ENST00000441123 MCF2LO15068 1137 aa13.91□□□□□ -0.18
BRPF3-203ENST00000441123 TLR3O15455 904 aaKnown RBP13.91□□□□□ -0.18
BRPF3-203ENST00000441123 TEX33O43247 280 aa13.91□□□□□ -0.18
BRPF3-203ENST00000441123 CTNND1O60716 968 aaKnown RBP13.91□□□□□ -0.18
BRPF3-203ENST00000441123 PDXDC1Q6P996 788 aa13.91□□□□□ -0.18
BRPF3-203ENST00000441123 RTKN2Q8IZC4 609 aa13.91□□□□□ -0.18
BRPF3-203ENST00000441123 ANKRD7Q92527 254 aa13.91□□□□□ -0.18
BRPF3-203ENST00000441123 MMS19Q96T76 1030 aa13.91□□□□□ -0.18
BRPF3-203ENST00000441123 DBNDD1Q9H9R9 158 aa13.91□□□□□ -0.18
BRPF3-203ENST00000441123 CPSF2Q9P2I0 782 aaKnown RBP13.91□□□□□ -0.18
BRPF3-203ENST00000441123 NFU1Q9UMS0 254 aa13.91□□□□□ -0.18
BRPF3-203ENST00000441123 NR1I3Q14994 352 aa13.91□□□□□ -0.18
BRPF3-203ENST00000441123 FAM83BQ5T0W9 1011 aa13.91□□□□□ -0.18
BRPF3-203ENST00000441123 KAZNQ674X7 775 aa13.91□□□□□ -0.18
BRPF3-203ENST00000441123 PCIF1Q9H4Z3 704 aa13.91□□□□□ -0.18
BRPF3-203ENST00000441123 CEP170BQ9Y4F5 1589 aaPredicted RBP13.91□□□□□ -0.18
BRPF3-203ENST00000441123 H7C0C1 242 aa13.91□□□□□ -0.18
BRPF3-203ENST00000441123 SMARCA1P28370 1054 aa13.91□□□□□ -0.18
BRPF3-203ENST00000441123 CRKP46108 304 aa13.91□□□□□ -0.18
BRPF3-203ENST00000441123 ATP5OP48047 213 aa13.91□□□□□ -0.18
BRPF3-203ENST00000441123 KCNH2Q12809 1159 aa13.91□□□□□ -0.18
BRPF3-203ENST00000441123 NR1H3Q13133 447 aa13.91□□□□□ -0.18
BRPF3-203ENST00000441123 SF3B3Q15393 1217 aaKnown RBP13.91□□□□□ -0.18
BRPF3-203ENST00000441123 PODNQ7Z5L7 613 aa13.91□□□□□ -0.18
BRPF3-203ENST00000441123 SFR1Q86XK3 245 aa13.91□□□□□ -0.18
BRPF3-203ENST00000441123 CEP95Q96GE4 821 aa13.91□□□□□ -0.18
BRPF3-203ENST00000441123 SLITRK6Q9H5Y7 841 aa13.91□□□□□ -0.18
BRPF3-203ENST00000441123 PLAAQ9Y263 795 aa13.91□□□□□ -0.18
BRPF3-203ENST00000441123 PFASO15067 1338 aa13.91□□□□□ -0.18
BRPF3-203ENST00000441123 POTEMA6NI47 508 aa13.91□□□□□ -0.18
BRPF3-203ENST00000441123 CTTNQ14247 550 aaKnown RBP13.91□□□□□ -0.18
BRPF3-203ENST00000441123 PDIA6Q15084 440 aa13.91□□□□□ -0.18
BRPF3-203ENST00000441123 KCTD17Q8N5Z5 321 aa13.91□□□□□ -0.18
BRPF3-203ENST00000441123 CELF1Q92879 486 aaKnown RBP13.91□□□□□ -0.18
BRPF3-203ENST00000441123 NSUN4Q96CB9 384 aaKnown RBP13.91□□□□□ -0.18
BRPF3-203ENST00000441123 NCAPGQ9BPX3 1015 aa13.91□□□□□ -0.18
BRPF3-203ENST00000441123 Q9H521 79 aa13.91□□□□□ -0.18
BRPF3-203ENST00000441123 SALL3Q9BXA9 1300 aa13.9□□□□□ -0.18
BRPF3-203ENST00000441123 IPO5O00410 1097 aaKnown RBP13.9□□□□□ -0.18
BRPF3-203ENST00000441123 GPC5P78333 572 aa13.9□□□□□ -0.18
BRPF3-203ENST00000441123 PRKG1Q13976 671 aa13.9□□□□□ -0.18
BRPF3-203ENST00000441123 TTC19Q6DKK2 380 aaPredicted RBP13.9□□□□□ -0.18
BRPF3-203ENST00000441123 GBP7Q8N8V2 638 aaPredicted RBP13.9□□□□□ -0.18
BRPF3-203ENST00000441123 NOVA2Q9UNW9 492 aaKnown RBP13.9□□□□□ -0.18
BRPF3-203ENST00000441123 FAM187AA6NFU0 413 aa13.9□□□□□ -0.18
BRPF3-203ENST00000441123 RHOBTB3O94955 611 aa13.9□□□□□ -0.18
BRPF3-203ENST00000441123 ANTXR2P58335 489 aa13.9□□□□□ -0.18
BRPF3-203ENST00000441123 UBXN2AP68543 259 aa13.9□□□□□ -0.18
BRPF3-203ENST00000441123 E4F1Q66K89 784 aaPredicted RBP13.9□□□□□ -0.18
BRPF3-203ENST00000441123 RBM43Q6ZSC3 357 aaKnown RBP13.9□□□□□ -0.18
BRPF3-203ENST00000441123 ADSSL1Q8N142 457 aa13.9□□□□□ -0.18
BRPF3-203ENST00000441123 MED10Q9BTT4 135 aa13.9□□□□□ -0.18
BRPF3-203ENST00000441123 ZNF233A6NK53 670 aa13.9□□□□□ -0.18
BRPF3-203ENST00000441123 CASQ2O14958 399 aaPredicted RBP13.9□□□□□ -0.18
BRPF3-203ENST00000441123 FGGP02679 453 aa13.9□□□□□ -0.18
BRPF3-203ENST00000441123 MSH2P43246 934 aa13.9□□□□□ -0.18
BRPF3-203ENST00000441123 YWHAGP61981 247 aaKnown RBP eCLIP13.9□□□□□ -0.18
BRPF3-203ENST00000441123 PRPSAP1Q14558 356 aa13.9□□□□□ -0.18
BRPF3-203ENST00000441123 SRBD1Q8N5C6 995 aaKnown RBP13.9□□□□□ -0.18
BRPF3-203ENST00000441123 SUGCTQ9HAC7 445 aa13.9□□□□□ -0.18
BRPF3-203ENST00000441123 MROH1Q8NDA8 1641 aa13.9□□□□□ -0.18
BRPF3-203ENST00000441123 ZNF335Q9H4Z2 1342 aaPredicted RBP13.9□□□□□ -0.18
BRPF3-203ENST00000441123 NMT2O60551 498 aa13.9□□□□□ -0.18
BRPF3-203ENST00000441123 SLC7A5Q01650 507 aa13.9□□□□□ -0.18
BRPF3-203ENST00000441123 KRT39Q6A163 491 aa13.9□□□□□ -0.18
BRPF3-203ENST00000441123 NCAPG2Q86XI2 1143 aa13.9□□□□□ -0.18
BRPF3-203ENST00000441123 GINS2Q9Y248 185 aa13.9□□□□□ -0.18
BRPF3-203ENST00000441123 A0A1W2PQJ5 194 aa13.89□□□□□ -0.19
BRPF3-203ENST00000441123 CTIFO43310 598 aaKnown RBP13.89□□□□□ -0.19
BRPF3-203ENST00000441123 MYBL1P10243 752 aa13.89□□□□□ -0.19
BRPF3-203ENST00000441123 SYNE4Q8N205 404 aa13.89□□□□□ -0.19
BRPF3-203ENST00000441123 MCPH1Q8NEM0 835 aa13.89□□□□□ -0.19
BRPF3-203ENST00000441123 UHMK1Q8TAS1 419 aaKnown RBP13.89□□□□□ -0.19
BRPF3-203ENST00000441123 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.89□□□□□ -0.198e-7■■□□□ 14.4
BRPF3-203ENST00000441123 HGSO14964 777 aaPredicted RBP13.89□□□□□ -0.19
BRPF3-203ENST00000441123 SRGNP10124 158 aa13.89□□□□□ -0.19
BRPF3-203ENST00000441123 CASP1P29466 404 aa13.89□□□□□ -0.19
BRPF3-203ENST00000441123 SFNP31947 248 aa13.89□□□□□ -0.19
BRPF3-203ENST00000441123 ARHGAP4P98171 946 aa13.89□□□□□ -0.19
BRPF3-203ENST00000441123 KCTD2Q14681 263 aa13.89□□□□□ -0.19
BRPF3-203ENST00000441123 XXYLT1Q8NBI6 393 aa13.89□□□□□ -0.19
BRPF3-203ENST00000441123 ENGASEQ8NFI3 743 aa13.89□□□□□ -0.19
BRPF3-203ENST00000441123 RBM41Q96IZ5 413 aaKnown RBP13.89□□□□□ -0.19
BRPF3-203ENST00000441123 MAP2P11137 1827 aaKnown RBP13.89□□□□□ -0.19
BRPF3-203ENST00000441123 CLRN2A0PK11 232 aa13.89□□□□□ -0.19
BRPF3-203ENST00000441123 CAPN9O14815 690 aa13.89□□□□□ -0.19
BRPF3-203ENST00000441123 ASNSP08243 561 aa13.89□□□□□ -0.19
BRPF3-203ENST00000441123 IRX5P78411 483 aaPredicted RBP13.89□□□□□ -0.19
BRPF3-203ENST00000441123 SUPT20HL1Q3ZLR7 823 aa13.89□□□□□ -0.19
BRPF3-203ENST00000441123 PAGR1Q9BTK6 254 aa13.89□□□□□ -0.19
BRPF3-203ENST00000441123 AP1M1Q9BXS5 423 aa13.89□□□□□ -0.19
BRPF3-203ENST00000441123 POC1B-GALNT4F8VUJ3 575 aa13.89□□□□□ -0.19
BRPF3-203ENST00000441123 GUCY1A2P33402 732 aa13.89□□□□□ -0.19
BRPF3-203ENST00000441123 MAGEA9P43362 315 aa13.89□□□□□ -0.19
BRPF3-203ENST00000441123 GFPT1Q06210 699 aaPredicted RBP13.89□□□□□ -0.19
BRPF3-203ENST00000441123 PCGF5Q86SE9 256 aa13.89□□□□□ -0.19
BRPF3-203ENST00000441123 DDX23Q9BUQ8 820 aaKnown RBP13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms