RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 PP2D1A8MPX8 630 aa13.01□□□□□ -0.33
LTBR-203ENST00000441074 BHMG1C9JSJ3 638 aaPredicted RBP13.01□□□□□ -0.33
LTBR-203ENST00000441074 ECE2O60344 883 aa13.01□□□□□ -0.33
LTBR-203ENST00000441074 VEGFAP15692 232 aaPredicted RBP13.01□□□□□ -0.33
LTBR-203ENST00000441074 RIPK1Q13546 671 aa13.01□□□□□ -0.33
LTBR-203ENST00000441074 CCDC178Q5BJE1 867 aa13.01□□□□□ -0.33
LTBR-203ENST00000441074 HGSNATQ68CP4 663 aa13.01□□□□□ -0.33
LTBR-203ENST00000441074 NAIF1Q69YI7 327 aaPredicted RBP13.01□□□□□ -0.33
LTBR-203ENST00000441074 ZFPM1Q8IX07 1006 aa13.01□□□□□ -0.33
LTBR-203ENST00000441074 OR2W6PQ8NHA6 318 aa13.01□□□□□ -0.33
LTBR-203ENST00000441074 C7orf25Q9BPX7 421 aa13.01□□□□□ -0.33
LTBR-203ENST00000441074 MKNK2Q9HBH9 465 aa13.01□□□□□ -0.33
LTBR-203ENST00000441074 SLC24A3Q9HC58 644 aa13.01□□□□□ -0.33
LTBR-203ENST00000441074 PCDHGC5Q9Y5F6 944 aa13.01□□□□□ -0.33
LTBR-203ENST00000441074 SLX4Q8IY92 1834 aa13.01□□□□□ -0.33
LTBR-203ENST00000441074 FAM205AQ6ZU69 1335 aa13□□□□□ -0.33
LTBR-203ENST00000441074 ADAMTS3O15072 1205 aa13□□□□□ -0.33
LTBR-203ENST00000441074 PPP1R12BO60237 982 aaPredicted RBP13□□□□□ -0.33
LTBR-203ENST00000441074 FTCDO95954 541 aa13□□□□□ -0.33
LTBR-203ENST00000441074 GSTA1P08263 222 aa13□□□□□ -0.33
LTBR-203ENST00000441074 RPSAP08865 295 aaKnown RBP13□□□□□ -0.33
LTBR-203ENST00000441074 PPP4CP60510 307 aa13□□□□□ -0.33
LTBR-203ENST00000441074 NFIAQ12857 509 aa13□□□□□ -0.33
LTBR-203ENST00000441074 MAN2A1Q16706 1144 aa13□□□□□ -0.33
LTBR-203ENST00000441074 CENPPQ6IPU0 288 aa13□□□□□ -0.33
LTBR-203ENST00000441074 CENPTQ96BT3 561 aa13□□□□□ -0.33
LTBR-203ENST00000441074 AK8Q96MA6 479 aa13□□□□□ -0.33
LTBR-203ENST00000441074 PLIN2Q99541 437 aa13□□□□□ -0.33
LTBR-203ENST00000441074 TRIM9Q9C026 710 aa13□□□□□ -0.33
LTBR-203ENST00000441074 BCCIPQ9P287 314 aaKnown RBP eCLIP13□□□□□ -0.33
LTBR-203ENST00000441074 NOVA2Q9UNW9 492 aaKnown RBP13□□□□□ -0.33
LTBR-203ENST00000441074 FRMD3A2A2Y4 597 aa13□□□□□ -0.33
LTBR-203ENST00000441074 PHF20L1A8MW92 1017 aa13□□□□□ -0.33
LTBR-203ENST00000441074 M0R2N6 131 aa13□□□□□ -0.33
LTBR-203ENST00000441074 ATP2C2O75185 946 aa13□□□□□ -0.33
LTBR-203ENST00000441074 LDHCP07864 332 aa13□□□□□ -0.33
LTBR-203ENST00000441074 RBM5P52756 815 aaKnown RBP eCLIP13□□□□□ -0.33
LTBR-203ENST00000441074 TCP10Q12799 353 aa13□□□□□ -0.33
LTBR-203ENST00000441074 ACCSLQ4AC99 568 aa13□□□□□ -0.33
LTBR-203ENST00000441074 DGKHQ86XP1 1220 aa13□□□□□ -0.33
LTBR-203ENST00000441074 CLEC10AQ8IUN9 316 aa13□□□□□ -0.33
LTBR-203ENST00000441074 KLHL7Q8IXQ5 586 aa13□□□□□ -0.33
LTBR-203ENST00000441074 LRRC15Q8TF66 581 aa13□□□□□ -0.33
LTBR-203ENST00000441074 SEMA6BQ9H3T3 888 aa13□□□□□ -0.33
LTBR-203ENST00000441074 CNOT10Q9H9A5 744 aaKnown RBP13□□□□□ -0.33
LTBR-203ENST00000441074 FGFR1OPO95684 399 aaKnown RBP12.99□□□□□ -0.33
LTBR-203ENST00000441074 EHHADHQ08426 723 aa12.99□□□□□ -0.33
LTBR-203ENST00000441074 HIBCHQ6NVY1 386 aaPredicted RBP12.99□□□□□ -0.33
LTBR-203ENST00000441074 CCDC197Q8NCU1 140 aa12.99□□□□□ -0.33
LTBR-203ENST00000441074 CCHCR1Q8TD31 782 aa12.99□□□□□ -0.33
LTBR-203ENST00000441074 SCFD2Q8WU76 684 aa12.99□□□□□ -0.33
LTBR-203ENST00000441074 ANKS1AQ92625 1134 aa12.99□□□□□ -0.33
LTBR-203ENST00000441074 SYN2Q92777 582 aaPredicted RBP12.99□□□□□ -0.33
LTBR-203ENST00000441074 CHMP6Q96FZ7 201 aa12.99□□□□□ -0.33
LTBR-203ENST00000441074 NUCKS1Q9H1E3 243 aaKnown RBP12.99□□□□□ -0.33
LTBR-203ENST00000441074 ZNF277Q9NRM2 450 aaPredicted RBP12.99□□□□□ -0.33
LTBR-203ENST00000441074 BAIAP2L1Q9UHR4 511 aa12.99□□□□□ -0.33
LTBR-203ENST00000441074 FAM196BA6NMK8 535 aa12.99□□□□□ -0.33
LTBR-203ENST00000441074 YDJCA8MPS7 323 aa12.99□□□□□ -0.33
LTBR-203ENST00000441074 BUB1BO60566 1050 aaPredicted RBP12.99□□□□□ -0.33
LTBR-203ENST00000441074 FCER1AP12319 257 aa12.99□□□□□ -0.33
LTBR-203ENST00000441074 DNA2P51530 1060 aa12.99□□□□□ -0.33
LTBR-203ENST00000441074 ASIC1P78348 528 aa12.99□□□□□ -0.33
LTBR-203ENST00000441074 GRM4Q14833 912 aa12.99□□□□□ -0.33
LTBR-203ENST00000441074 SLMAPQ14BN4 828 aa12.99□□□□□ -0.33
LTBR-203ENST00000441074 PPP1R7Q15435 360 aa12.99□□□□□ -0.33
LTBR-203ENST00000441074 SLC9C1Q4G0N8 1177 aa12.99□□□□□ -0.33
LTBR-203ENST00000441074 APOBEC3HQ6NTF7 200 aaKnown RBP12.99□□□□□ -0.33
LTBR-203ENST00000441074 CNNM4Q6P4Q7 775 aa12.99□□□□□ -0.33
LTBR-203ENST00000441074 CACNA2D4Q7Z3S7 1137 aa12.99□□□□□ -0.33
LTBR-203ENST00000441074 STAG2Q8N3U4 1231 aa12.99□□□□□ -0.33
LTBR-203ENST00000441074 ARMC2Q8NEN0 867 aa12.99□□□□□ -0.33
LTBR-203ENST00000441074 TAF4BQ92750 862 aa12.99□□□□□ -0.33
LTBR-203ENST00000441074 CPVLQ9H3G5 476 aa12.99□□□□□ -0.33
LTBR-203ENST00000441074 USP40Q9NVE5 1235 aa12.99□□□□□ -0.33
LTBR-203ENST00000441074 STX8Q9UNK0 236 aa12.99□□□□□ -0.33
LTBR-203ENST00000441074 BACH1O14867 736 aa12.98□□□□□ -0.33
LTBR-203ENST00000441074 SERPING1P05155 500 aa12.98□□□□□ -0.33
LTBR-203ENST00000441074 YBX3P16989 372 aaKnown RBP eCLIP12.98□□□□□ -0.33
LTBR-203ENST00000441074 HOXA7P31268 230 aaPredicted RBP12.98□□□□□ -0.33
LTBR-203ENST00000441074 CCNHP51946 323 aaPredicted RBP12.98□□□□□ -0.33
LTBR-203ENST00000441074 EIF6P56537 245 aaKnown RBP12.98□□□□□ -0.33
LTBR-203ENST00000441074 RNASE9P60153 205 aaKnown RBP12.98□□□□□ -0.33
LTBR-203ENST00000441074 MAGOHP61326 146 aaKnown RBP12.98□□□□□ -0.33
LTBR-203ENST00000441074 GPR162Q16538 588 aa12.98□□□□□ -0.33
LTBR-203ENST00000441074 SHROOM1Q2M3G4 852 aaPredicted RBP12.98□□□□□ -0.33
LTBR-203ENST00000441074 TDRD12Q587J7 1177 aaKnown RBP12.98□□□□□ -0.33
LTBR-203ENST00000441074 ERMARDQ5T6L9 678 aa12.98□□□□□ -0.33
LTBR-203ENST00000441074 KIRREL3Q8IZU9 778 aa12.98□□□□□ -0.33
LTBR-203ENST00000441074 CCDC63Q8NA47 563 aa12.98□□□□□ -0.33
LTBR-203ENST00000441074 NSMCE1Q8WV22 266 aa12.98□□□□□ -0.33
LTBR-203ENST00000441074 MAGOHBQ96A72 148 aaKnown RBP12.98□□□□□ -0.33
LTBR-203ENST00000441074 TBC1D31Q96DN5 1066 aa12.98□□□□□ -0.33
LTBR-203ENST00000441074 TMEM60Q9H2L4 133 aa12.98□□□□□ -0.33
LTBR-203ENST00000441074 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.98□□□□□ -0.331e-10■□□□□ 9.7
LTBR-203ENST00000441074 FBXL5Q9UKA1 691 aa12.98□□□□□ -0.33
LTBR-203ENST00000441074 SLC12A4Q9UP95 1085 aa12.98□□□□□ -0.33
LTBR-203ENST00000441074 GAKO14976 1311 aa12.98□□□□□ -0.33
LTBR-203ENST00000441074 CFAP73A6NFT4 308 aa12.97□□□□□ -0.33
LTBR-203ENST00000441074 RAD17O75943 681 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms