RNA–Protein interactions for RNA: ENST00000440835.6

PTPRR-204, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRR, Length 2,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-204ENST00000440835 ATG2AQ2TAZ0 1938 aa6.84□□□□□ -1.31
PTPRR-204ENST00000440835 TRANK1O15050 2925 aa6.84□□□□□ -1.31
PTPRR-204ENST00000440835 E7EWF7 191 aa6.84□□□□□ -1.31
PTPRR-204ENST00000440835 HOXA13P31271 388 aaPredicted RBP6.84□□□□□ -1.31
PTPRR-204ENST00000440835 MCM5P33992 734 aa6.84□□□□□ -1.31
PTPRR-204ENST00000440835 ARHGAP4P98171 946 aa6.84□□□□□ -1.31
PTPRR-204ENST00000440835 ZP2Q05996 745 aa6.84□□□□□ -1.31
PTPRR-204ENST00000440835 PPFIA1Q13136 1202 aa6.84□□□□□ -1.31
PTPRR-204ENST00000440835 SEMA3FQ13275 785 aa6.84□□□□□ -1.31
PTPRR-204ENST00000440835 CYFIP1Q7L576 1253 aa6.84□□□□□ -1.31
PTPRR-204ENST00000440835 FCHSD1Q86WN1 690 aa6.84□□□□□ -1.31
PTPRR-204ENST00000440835 MB21D2Q8IYB1 491 aaPredicted RBP6.84□□□□□ -1.31
PTPRR-204ENST00000440835 MAP4K1Q92918 833 aa6.84□□□□□ -1.31
PTPRR-204ENST00000440835 PDLIM2Q96JY6 352 aa6.84□□□□□ -1.31
PTPRR-204ENST00000440835 C22orf23Q9BZE7 217 aa6.84□□□□□ -1.31
PTPRR-204ENST00000440835 JADE2Q9NQC1 790 aa6.84□□□□□ -1.31
PTPRR-204ENST00000440835 AAASQ9NRG9 546 aa6.84□□□□□ -1.31
PTPRR-204ENST00000440835 C1orf112Q9NSG2 853 aa6.84□□□□□ -1.31
PTPRR-204ENST00000440835 CGNQ9P2M7 1197 aaKnown RBP6.84□□□□□ -1.31
PTPRR-204ENST00000440835 ZKSCAN5Q9Y2L8 839 aa6.84□□□□□ -1.31
PTPRR-204ENST00000440835 BDP1A6H8Y1 2624 aa6.84□□□□□ -1.31
PTPRR-204ENST00000440835 SGSM2O43147 1006 aa6.84□□□□□ -1.31
PTPRR-204ENST00000440835 CYTH3O43739 400 aa6.84□□□□□ -1.31
PTPRR-204ENST00000440835 EYA4O95677 639 aa6.84□□□□□ -1.31
PTPRR-204ENST00000440835 CYP21A2P08686 494 aa6.84□□□□□ -1.31
PTPRR-204ENST00000440835 SRGAP2BP0DMP2 458 aa6.84□□□□□ -1.31
PTPRR-204ENST00000440835 KCNA2P16389 499 aa6.84□□□□□ -1.31
PTPRR-204ENST00000440835 KCNA5P22460 613 aa6.84□□□□□ -1.31
PTPRR-204ENST00000440835 CHMLP26374 656 aa6.84□□□□□ -1.31
PTPRR-204ENST00000440835 MRPS6P82932 125 aaKnown RBP6.84□□□□□ -1.31
PTPRR-204ENST00000440835 ZNF200P98182 395 aaPredicted RBP6.84□□□□□ -1.31
PTPRR-204ENST00000440835 HIC1Q14526 733 aa6.84□□□□□ -1.31
PTPRR-204ENST00000440835 HERC4Q5GLZ8 1057 aaPredicted RBP6.84□□□□□ -1.31
PTPRR-204ENST00000440835 FBXO47Q5MNV8 452 aa6.84□□□□□ -1.31
PTPRR-204ENST00000440835 ZNF654Q8IZM8 581 aa6.84□□□□□ -1.31
PTPRR-204ENST00000440835 C11orf16Q9NQ32 467 aa6.84□□□□□ -1.31
PTPRR-204ENST00000440835 RBM28Q9NW13 759 aaKnown RBP6.84□□□□□ -1.31
PTPRR-204ENST00000440835 TUBE1Q9UJT0 475 aa6.84□□□□□ -1.31
PTPRR-204ENST00000440835 PCDHA2Q9Y5H9 948 aa6.84□□□□□ -1.31
PTPRR-204ENST00000440835 DOCK5Q9H7D0 1870 aa6.83□□□□□ -1.32
PTPRR-204ENST00000440835 SMIM35A0A1B0GVV1 85 aa6.83□□□□□ -1.32
PTPRR-204ENST00000440835 SPDYE3A6NKU9 549 aa6.83□□□□□ -1.32
PTPRR-204ENST00000440835 ENPP3O14638 875 aa6.83□□□□□ -1.32
PTPRR-204ENST00000440835 MEIS2O14770 477 aa6.83□□□□□ -1.32
PTPRR-204ENST00000440835 DGKIO75912 1065 aa6.83□□□□□ -1.32
PTPRR-204ENST00000440835 SSTR3P32745 418 aaPredicted RBP6.83□□□□□ -1.32
PTPRR-204ENST00000440835 CTNNB1P35222 781 aa6.83□□□□□ -1.32
PTPRR-204ENST00000440835 TCF7P36402 384 aaPredicted RBP6.83□□□□□ -1.32
PTPRR-204ENST00000440835 COASYQ13057 564 aa6.83□□□□□ -1.32
PTPRR-204ENST00000440835 GRIK4Q16099 956 aa6.83□□□□□ -1.32
PTPRR-204ENST00000440835 TCEAL5Q5H9L2 206 aa6.83□□□□□ -1.32
PTPRR-204ENST00000440835 KRT40Q6A162 431 aa6.83□□□□□ -1.32
PTPRR-204ENST00000440835 HOMER1Q86YM7 354 aa6.83□□□□□ -1.32
PTPRR-204ENST00000440835 EXOC8Q8IYI6 725 aa6.83□□□□□ -1.32
PTPRR-204ENST00000440835 EFHBQ8N7U6 833 aa6.83□□□□□ -1.32
PTPRR-204ENST00000440835 AZI2Q9H6S1 392 aa6.83□□□□□ -1.32
PTPRR-204ENST00000440835 PSTPIP2Q9H939 334 aa6.83□□□□□ -1.32
PTPRR-204ENST00000440835 LY9Q9HBG7 655 aa6.83□□□□□ -1.32
PTPRR-204ENST00000440835 SETD4Q9NVD3 440 aa6.83□□□□□ -1.32
PTPRR-204ENST00000440835 CD207Q9UJ71 328 aa6.83□□□□□ -1.32
PTPRR-204ENST00000440835 TRPV2Q9Y5S1 764 aa6.83□□□□□ -1.32
PTPRR-204ENST00000440835 KIAA1671Q9BY89 1806 aa6.83□□□□□ -1.32
PTPRR-204ENST00000440835 CCDC69A6NI79 296 aa6.83□□□□□ -1.32
PTPRR-204ENST00000440835 CHRNA1P02708 482 aa6.83□□□□□ -1.32
PTPRR-204ENST00000440835 GSPT1P15170 499 aaKnown RBP6.83□□□□□ -1.32
PTPRR-204ENST00000440835 ATF7P17544 494 aaPredicted RBP6.83□□□□□ -1.32
PTPRR-204ENST00000440835 AP3B2Q13367 1082 aa6.83□□□□□ -1.32
PTPRR-204ENST00000440835 LPIN1Q14693 890 aa6.83□□□□□ -1.32
PTPRR-204ENST00000440835 SKOR2Q2VWA4 1001 aaPredicted RBP6.83□□□□□ -1.32
PTPRR-204ENST00000440835 SGMS1Q86VZ5 419 aa6.83□□□□□ -1.32
PTPRR-204ENST00000440835 MYRIPQ8NFW9 859 aa6.83□□□□□ -1.32
PTPRR-204ENST00000440835 SDF4Q9BRK5 362 aa6.83□□□□□ -1.32
PTPRR-204ENST00000440835 LZTS1Q9Y250 596 aa6.83□□□□□ -1.32
PTPRR-204ENST00000440835 SPDYE4A6NLX3 237 aa6.82□□□□□ -1.32
PTPRR-204ENST00000440835 HOXA2O43364 376 aa6.82□□□□□ -1.32
PTPRR-204ENST00000440835 ATG7O95352 703 aa6.82□□□□□ -1.32
PTPRR-204ENST00000440835 ADAM15Q13444 863 aa6.82□□□□□ -1.32
PTPRR-204ENST00000440835 MTMR1Q13613 665 aa6.82□□□□□ -1.32
PTPRR-204ENST00000440835 CBX2Q14781 532 aaPredicted RBP6.82□□□□□ -1.32
PTPRR-204ENST00000440835 SLC35G1Q2M3R5 365 aa6.82□□□□□ -1.32
PTPRR-204ENST00000440835 ZNF484Q5JVG2 852 aa6.82□□□□□ -1.32
PTPRR-204ENST00000440835 FAM160B1Q5W0V3 765 aa6.82□□□□□ -1.32
PTPRR-204ENST00000440835 SYNE3Q6ZMZ3 975 aa6.82□□□□□ -1.32
PTPRR-204ENST00000440835 CRIPAKQ8N1N5 446 aa6.82□□□□□ -1.32
PTPRR-204ENST00000440835 CEP120Q8N960 986 aa6.82□□□□□ -1.32
PTPRR-204ENST00000440835 RBSNQ9H1K0 784 aa6.82□□□□□ -1.32
PTPRR-204ENST00000440835 ELAC1Q9H777 363 aaKnown RBP6.82□□□□□ -1.32
PTPRR-204ENST00000440835 IGSF9BQ9UPX0 1349 aa6.82□□□□□ -1.32
PTPRR-204ENST00000440835 GSTTP1A0A1W2PQM5 241 aa6.82□□□□□ -1.32
PTPRR-204ENST00000440835 MBTPS2O43462 519 aa6.82□□□□□ -1.32
PTPRR-204ENST00000440835 EPB41L2O43491 1005 aaKnown RBP6.82□□□□□ -1.32
PTPRR-204ENST00000440835 LINC00271P0C7V0 271 aa6.82□□□□□ -1.32
PTPRR-204ENST00000440835 BTG3Q14201 252 aaPredicted RBP6.82□□□□□ -1.32
PTPRR-204ENST00000440835 MXRA8Q9BRK3 442 aa6.82□□□□□ -1.32
PTPRR-204ENST00000440835 JPH1Q9HDC5 661 aaPredicted RBP6.82□□□□□ -1.32
PTPRR-204ENST00000440835 RIC8AQ9NPQ8 531 aa6.82□□□□□ -1.32
PTPRR-204ENST00000440835 SLC9A2Q9UBY0 812 aa6.82□□□□□ -1.32
PTPRR-204ENST00000440835 STK39Q9UEW8 545 aa6.82□□□□□ -1.32
PTPRR-204ENST00000440835 MTUS1Q9ULD2 1270 aa6.82□□□□□ -1.32
PTPRR-204ENST00000440835 SH2B2O14492 632 aaPredicted RBP6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms