RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 BACH2Q9BYV9 841 aa26.71■■□□□ 1.87
VARS-217ENST00000440048 DISC1Q9NRI5 854 aa26.71■■□□□ 1.87
VARS-217ENST00000440048 GABBR1Q9UBS5 961 aa26.71■■□□□ 1.87
VARS-217ENST00000440048 GBF1Q92538 1859 aa26.7■■□□□ 1.87
VARS-217ENST00000440048 CHMP2AO43633 222 aa26.7■■□□□ 1.86
VARS-217ENST00000440048 HBP1O60381 514 aa26.7■■□□□ 1.86
VARS-217ENST00000440048 CCNT1O60563 726 aaKnown RBP26.7■■□□□ 1.86
VARS-217ENST00000440048 CD2BP2O95400 341 aaKnown RBP26.7■■□□□ 1.86
VARS-217ENST00000440048 CNKSR3Q6P9H4 555 aa26.7■■□□□ 1.86
VARS-217ENST00000440048 RPAINQ86UA6 219 aa26.7■■□□□ 1.86
VARS-217ENST00000440048 C8orf76Q96K31 380 aa26.7■■□□□ 1.86
VARS-217ENST00000440048 NAP1L4Q99733 375 aaKnown RBP26.7■■□□□ 1.86
VARS-217ENST00000440048 DNAJB2P25686 324 aa26.69■■□□□ 1.86
VARS-217ENST00000440048 SFNP31947 248 aa26.69■■□□□ 1.86
VARS-217ENST00000440048 JAK3P52333 1124 aa26.69■■□□□ 1.86
VARS-217ENST00000440048 TCTN1Q2MV58 587 aa26.69■■□□□ 1.86
VARS-217ENST00000440048 FAM26DQ5JW98 314 aa26.69■■□□□ 1.86
VARS-217ENST00000440048 B3GNT9Q6UX72 402 aa26.69■■□□□ 1.86
VARS-217ENST00000440048 CKAP2LQ8IYA6 745 aa26.69■■□□□ 1.86
VARS-217ENST00000440048 IGSF9BQ9UPX0 1349 aa26.68■■□□□ 1.86
VARS-217ENST00000440048 BAIAP3O94812 1187 aa26.68■■□□□ 1.86
VARS-217ENST00000440048 PBX2P40425 430 aa26.68■■□□□ 1.86
VARS-217ENST00000440048 FAM184AQ8NB25 1140 aa26.68■■□□□ 1.86
VARS-217ENST00000440048 DNAJB3Q8WWF6 145 aa26.68■■□□□ 1.86
VARS-217ENST00000440048 FAM20AQ96MK3 541 aa26.68■■□□□ 1.86
VARS-217ENST00000440048 PBX4Q9BYU1 374 aa26.68■■□□□ 1.86
VARS-217ENST00000440048 OSBPL7Q9BZF2 842 aa26.68■■□□□ 1.86
VARS-217ENST00000440048 SEMA6BQ9H3T3 888 aa26.68■■□□□ 1.86
VARS-217ENST00000440048 KCNMB3Q9NPA1 279 aa26.68■■□□□ 1.86
VARS-217ENST00000440048 PCDHA2Q9Y5H9 948 aa26.68■■□□□ 1.86
VARS-217ENST00000440048 EVPLQ92817 2033 aa26.67■■□□□ 1.86
VARS-217ENST00000440048 ATP2A2P16615 1042 aaKnown RBP26.67■■□□□ 1.86
VARS-217ENST00000440048 SAFBQ15424 915 aaKnown RBP eCLIP26.67■■□□□ 1.86
VARS-217ENST00000440048 ZNF484Q5JVG2 852 aa26.67■■□□□ 1.86
VARS-217ENST00000440048 MTHFD1LQ6UB35 978 aa26.67■■□□□ 1.86
VARS-217ENST00000440048 MIER3Q7Z3K6 550 aa26.67■■□□□ 1.86
VARS-217ENST00000440048 RSPH3Q86UC2 560 aa26.67■■□□□ 1.86
VARS-217ENST00000440048 RDM1Q8NG50 284 aa26.67■■□□□ 1.86
VARS-217ENST00000440048 BBXQ8WY36 941 aaPredicted RBP26.67■■□□□ 1.86
VARS-217ENST00000440048 TMX3Q96JJ7 454 aa26.67■■□□□ 1.86
VARS-217ENST00000440048 FAM161BQ96MY7 647 aa26.67■■□□□ 1.86
VARS-217ENST00000440048 COL1A2P08123 1366 aa26.67■■□□□ 1.86
VARS-217ENST00000440048 SIP14410 1827 aa26.67■■□□□ 1.86
VARS-217ENST00000440048 CHD9Q3L8U1 2897 aa26.67■■□□□ 1.86
VARS-217ENST00000440048 ZBTB42B2RXF5 422 aa26.66■■□□□ 1.86
VARS-217ENST00000440048 CHRNA1P02708 482 aa26.66■■□□□ 1.86
VARS-217ENST00000440048 TRMT1LQ7Z2T5 733 aaKnown RBP26.66■■□□□ 1.86
VARS-217ENST00000440048 POTEDQ86YR6 584 aa26.66■■□□□ 1.86
VARS-217ENST00000440048 FAM49AQ9H0Q0 323 aaPredicted RBP26.66■■□□□ 1.86
VARS-217ENST00000440048 TTYH1Q9H313 450 aaPredicted RBP26.66■■□□□ 1.86
VARS-217ENST00000440048 PTPRSQ13332 1948 aa26.66■■□□□ 1.86
VARS-217ENST00000440048 TBX3O15119 743 aa26.65■■□□□ 1.86
VARS-217ENST00000440048 ZNF862O60290 1169 aa26.65■■□□□ 1.86
VARS-217ENST00000440048 KLRC1P26715 233 aa26.65■■□□□ 1.86
VARS-217ENST00000440048 MCM2P49736 904 aa26.65■■□□□ 1.86
VARS-217ENST00000440048 MGAT3Q09327 533 aa26.65■■□□□ 1.86
VARS-217ENST00000440048 UGCGQ16739 394 aa26.65■■□□□ 1.86
VARS-217ENST00000440048 PLEKHG4Q58EX7 1191 aa26.65■■□□□ 1.86
VARS-217ENST00000440048 DBF4BQ8NFT6 615 aa26.65■■□□□ 1.86
VARS-217ENST00000440048 FBXO18Q8NFZ0 1043 aa26.65■■□□□ 1.86
VARS-217ENST00000440048 HAS1Q92839 578 aa26.65■■□□□ 1.86
VARS-217ENST00000440048 TIFAQ96CG3 184 aa26.65■■□□□ 1.86
VARS-217ENST00000440048 GUCD1Q96NT3 240 aa26.65■■□□□ 1.86
VARS-217ENST00000440048 SLC9A7Q96T83 725 aa26.65■■□□□ 1.86
VARS-217ENST00000440048 VAV3Q9UKW4 847 aa26.65■■□□□ 1.86
VARS-217ENST00000440048 ABHD14A-ACY1A0A1B0GW23 586 aa26.64■■□□□ 1.86
VARS-217ENST00000440048 RPLP2P05387 115 aaKnown RBP26.64■■□□□ 1.86
VARS-217ENST00000440048 RABGGTBP53611 331 aa26.64■■□□□ 1.86
VARS-217ENST00000440048 WDR5P61964 334 aaKnown RBP26.64■■□□□ 1.86
VARS-217ENST00000440048 IKBKEQ14164 716 aa26.64■■□□□ 1.86
VARS-217ENST00000440048 RAB30Q15771 203 aa26.64■■□□□ 1.86
VARS-217ENST00000440048 PHOSPHO2Q8TCD6 241 aa26.64■■□□□ 1.86
VARS-217ENST00000440048 FAM167AQ96KS9 214 aa26.64■■□□□ 1.86
VARS-217ENST00000440048 MSRAQ9UJ68 235 aa26.64■■□□□ 1.86
VARS-217ENST00000440048 MICAL3Q7RTP6 2002 aa26.64■■□□□ 1.86
VARS-217ENST00000440048 SMIM35A0A1B0GVV1 85 aa26.63■■□□□ 1.85
VARS-217ENST00000440048 WNT7AO00755 349 aa26.63■■□□□ 1.85
VARS-217ENST00000440048 KCNJ6P48051 423 aa26.63■■□□□ 1.85
VARS-217ENST00000440048 MRPS6P82932 125 aaKnown RBP26.63■■□□□ 1.85
VARS-217ENST00000440048 PRKCEQ02156 737 aa26.63■■□□□ 1.85
VARS-217ENST00000440048 PPP2R5CQ13362 524 aa26.63■■□□□ 1.85
VARS-217ENST00000440048 YBX2Q9Y2T7 364 aaKnown RBP26.63■■□□□ 1.85
VARS-217ENST00000440048 CDY2AQ9Y6F7 541 aa26.63■■□□□ 1.85
VARS-217ENST00000440048 LOXHD1Q8IVV2 1947 aa26.63■■□□□ 1.85
VARS-217ENST00000440048 EML1O00423 815 aa26.62■■□□□ 1.85
VARS-217ENST00000440048 MARCH6O60337 910 aa26.62■■□□□ 1.85
VARS-217ENST00000440048 OATP04181 439 aa26.62■■□□□ 1.85
VARS-217ENST00000440048 SEPT8Q92599 483 aa26.62■■□□□ 1.85
VARS-217ENST00000440048 FOXP1Q9H334 677 aaPredicted RBP26.62■■□□□ 1.85
VARS-217ENST00000440048 NRBP2Q9NSY0 501 aa26.62■■□□□ 1.85
VARS-217ENST00000440048 A0A0C4DFX4 3053 aa26.61■■□□□ 1.85
VARS-217ENST00000440048 EFCAB14O75071 495 aa26.61■■□□□ 1.85
VARS-217ENST00000440048 BAG4O95429 457 aaKnown RBP26.61■■□□□ 1.85
VARS-217ENST00000440048 C22orf31O95567 290 aa26.61■■□□□ 1.85
VARS-217ENST00000440048 DEFB103AP81534 67 aa26.61■■□□□ 1.85
VARS-217ENST00000440048 IER5Q5VY09 327 aa26.61■■□□□ 1.85
VARS-217ENST00000440048 CEP131Q9UPN4 1083 aa26.61■■□□□ 1.85
VARS-217ENST00000440048 PCDHA11Q9Y5I1 949 aa26.61■■□□□ 1.85
VARS-217ENST00000440048 GHRP10912 638 aa26.6■■□□□ 1.85
VARS-217ENST00000440048 MYOGP15173 224 aa26.6■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms