RNA–Protein interactions for RNA: ENST00000439724.7

SMAD3-202, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-202ENST00000439724 GCNT3O95395 438 aa12.99□□□□□ -0.33
SMAD3-202ENST00000439724 MYCLP12524 364 aaPredicted RBP12.99□□□□□ -0.33
SMAD3-202ENST00000439724 NR2F2P24468 414 aa12.99□□□□□ -0.33
SMAD3-202ENST00000439724 HNRNPH3P31942 346 aaKnown RBP12.99□□□□□ -0.33
SMAD3-202ENST00000439724 JAK3P52333 1124 aa12.99□□□□□ -0.33
SMAD3-202ENST00000439724 ADAM9Q13443 819 aa12.99□□□□□ -0.33
SMAD3-202ENST00000439724 NFIL3Q16649 462 aa12.99□□□□□ -0.33
SMAD3-202ENST00000439724 STXBP4Q6ZWJ1 553 aa12.99□□□□□ -0.33
SMAD3-202ENST00000439724 VSIG10LQ86VR7 867 aa12.99□□□□□ -0.33
SMAD3-202ENST00000439724 SULF1Q8IWU6 871 aa12.99□□□□□ -0.33
SMAD3-202ENST00000439724 RDM1Q8NG50 284 aa12.99□□□□□ -0.33
SMAD3-202ENST00000439724 CHP1Q99653 195 aa12.99□□□□□ -0.33
SMAD3-202ENST00000439724 ACAD9Q9H845 621 aa12.99□□□□□ -0.33
SMAD3-202ENST00000439724 ZNHIT6Q9NWK9 470 aaKnown RBP12.99□□□□□ -0.33
SMAD3-202ENST00000439724 EPN1Q9Y6I3 576 aaPredicted RBP12.99□□□□□ -0.33
SMAD3-202ENST00000439724 LCTP09848 1927 aa12.99□□□□□ -0.33
SMAD3-202ENST00000439724 ASTN1O14525 1302 aa12.98□□□□□ -0.33
SMAD3-202ENST00000439724 FANCGO15287 622 aa12.98□□□□□ -0.33
SMAD3-202ENST00000439724 MAFGO15525 162 aa12.98□□□□□ -0.33
SMAD3-202ENST00000439724 NDUFA10O95299 355 aa12.98□□□□□ -0.33
SMAD3-202ENST00000439724 NR3C2P08235 984 aa12.98□□□□□ -0.33
SMAD3-202ENST00000439724 RPL13P26373 211 aaKnown RBP12.98□□□□□ -0.33
SMAD3-202ENST00000439724 SFNP31947 248 aa12.98□□□□□ -0.33
SMAD3-202ENST00000439724 QARSP47897 775 aaKnown RBP12.98□□□□□ -0.33
SMAD3-202ENST00000439724 GNG11P61952 73 aa12.98□□□□□ -0.33
SMAD3-202ENST00000439724 KRT76Q01546 638 aa12.98□□□□□ -0.33
SMAD3-202ENST00000439724 PPP2R3AQ06190 1150 aa12.98□□□□□ -0.33
SMAD3-202ENST00000439724 FRMD5Q7Z6J6 570 aa12.98□□□□□ -0.33
SMAD3-202ENST00000439724 NLRX1Q86UT6 975 aa12.98□□□□□ -0.33
SMAD3-202ENST00000439724 MYCT1Q8N699 235 aa12.98□□□□□ -0.33
SMAD3-202ENST00000439724 ACRBPQ8NEB7 543 aa12.98□□□□□ -0.33
SMAD3-202ENST00000439724 NSUN6Q8TEA1 469 aaKnown RBP12.98□□□□□ -0.33
SMAD3-202ENST00000439724 INPP4AQ96PE3 977 aaPredicted RBP12.98□□□□□ -0.33
SMAD3-202ENST00000439724 FIZ1Q96SL8 496 aa12.98□□□□□ -0.33
SMAD3-202ENST00000439724 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.98□□□□□ -0.33
SMAD3-202ENST00000439724 CSADQ9Y600 493 aa12.98□□□□□ -0.33
SMAD3-202ENST00000439724 KIAA1217Q5T5P2 1943 aa12.98□□□□□ -0.33
SMAD3-202ENST00000439724 ZMYM2Q9UBW7 1377 aa12.98□□□□□ -0.33
SMAD3-202ENST00000439724 ADM5C9JUS6 153 aa12.98□□□□□ -0.33
SMAD3-202ENST00000439724 SLC16A3O15427 465 aaKnown RBP12.98□□□□□ -0.33
SMAD3-202ENST00000439724 PPP1R12BO60237 982 aaPredicted RBP12.98□□□□□ -0.33
SMAD3-202ENST00000439724 STAM2O75886 525 aa12.98□□□□□ -0.33
SMAD3-202ENST00000439724 SLU7O95391 586 aaKnown RBP12.98□□□□□ -0.33
SMAD3-202ENST00000439724 KCNMA1Q12791 1236 aa12.98□□□□□ -0.33
SMAD3-202ENST00000439724 MAPK7Q13164 816 aa12.98□□□□□ -0.33
SMAD3-202ENST00000439724 PRKG1Q13976 671 aa12.98□□□□□ -0.33
SMAD3-202ENST00000439724 PADI6Q6TGC4 694 aa12.98□□□□□ -0.33
SMAD3-202ENST00000439724 C4orf19Q8IY42 314 aa12.98□□□□□ -0.33
SMAD3-202ENST00000439724 CCDC170Q8IYT3 715 aa12.98□□□□□ -0.33
SMAD3-202ENST00000439724 ERO1AQ96HE7 468 aa12.98□□□□□ -0.33
SMAD3-202ENST00000439724 PURBQ96QR8 312 aaKnown RBP12.98□□□□□ -0.33
SMAD3-202ENST00000439724 WDR24Q96S15 920 aa12.98□□□□□ -0.33
SMAD3-202ENST00000439724 SENP7Q9BQF6 1050 aa12.98□□□□□ -0.33
SMAD3-202ENST00000439724 SYT17Q9BSW7 474 aa12.98□□□□□ -0.33
SMAD3-202ENST00000439724 A1CFQ9NQ94 594 aaKnown RBP12.98□□□□□ -0.33
SMAD3-202ENST00000439724 CYP39A1Q9NYL5 469 aa12.98□□□□□ -0.33
SMAD3-202ENST00000439724 TCEAL9Q9UHQ7 104 aa12.98□□□□□ -0.33
SMAD3-202ENST00000439724 PLAGL2Q9UPG8 496 aa12.98□□□□□ -0.33
SMAD3-202ENST00000439724 WDR81Q562E7 1941 aa12.97□□□□□ -0.33
SMAD3-202ENST00000439724 TESPA1A2RU30 521 aaPredicted RBP12.97□□□□□ -0.33
SMAD3-202ENST00000439724 SFI1A8K8P3 1242 aa12.97□□□□□ -0.33
SMAD3-202ENST00000439724 WDR64B1ANS9 1081 aa12.97□□□□□ -0.33
SMAD3-202ENST00000439724 EPHB6O15197 1021 aa12.97□□□□□ -0.33
SMAD3-202ENST00000439724 ATP9AO75110 1047 aa12.97□□□□□ -0.33
SMAD3-202ENST00000439724 NR3C1P04150 777 aa12.97□□□□□ -0.33
SMAD3-202ENST00000439724 MAPTP10636 758 aaKnown RBP12.97□□□□□ -0.33
SMAD3-202ENST00000439724 YBX3P16989 372 aaKnown RBP eCLIP12.97□□□□□ -0.336e-6■□□□□ 10.6
SMAD3-202ENST00000439724 NMT1P30419 496 aaKnown RBP12.97□□□□□ -0.33
SMAD3-202ENST00000439724 CASQ1P31415 396 aa12.97□□□□□ -0.33
SMAD3-202ENST00000439724 CYLC1P35663 651 aaPredicted RBP12.97□□□□□ -0.33
SMAD3-202ENST00000439724 ARHGAP25P42331 645 aa12.97□□□□□ -0.33
SMAD3-202ENST00000439724 IREB2P48200 963 aaKnown RBP12.97□□□□□ -0.33
SMAD3-202ENST00000439724 ARHGAP29Q52LW3 1261 aa12.97□□□□□ -0.33
SMAD3-202ENST00000439724 C9orf131Q5VYM1 1079 aa12.97□□□□□ -0.33
SMAD3-202ENST00000439724 ZNF746Q6NUN9 644 aaPredicted RBP12.97□□□□□ -0.33
SMAD3-202ENST00000439724 ZNF662Q6ZS27 426 aa12.97□□□□□ -0.33
SMAD3-202ENST00000439724 ZNF720Q7Z2F6 126 aa12.97□□□□□ -0.33
SMAD3-202ENST00000439724 FAM178BQ8IXR5 827 aa12.97□□□□□ -0.33
SMAD3-202ENST00000439724 CHST13Q8NET6 341 aa12.97□□□□□ -0.33
SMAD3-202ENST00000439724 NEK11Q8NG66 645 aa12.97□□□□□ -0.33
SMAD3-202ENST00000439724 L3MBTL3Q96JM7 780 aaPredicted RBP12.97□□□□□ -0.33
SMAD3-202ENST00000439724 TIPINQ9BVW5 301 aa12.97□□□□□ -0.33
SMAD3-202ENST00000439724 BCAS3Q9H6U6 928 aa12.97□□□□□ -0.33
SMAD3-202ENST00000439724 MMRN2Q9H8L6 949 aa12.97□□□□□ -0.33
SMAD3-202ENST00000439724 METTL14Q9HCE5 456 aaKnown RBP12.97□□□□□ -0.33
SMAD3-202ENST00000439724 FAM207AQ9NSI2 230 aaPredicted RBP12.97□□□□□ -0.33
SMAD3-202ENST00000439724 MYO1AQ9UBC5 1043 aa12.97□□□□□ -0.33
SMAD3-202ENST00000439724 REXO2Q9Y3B8 237 aaKnown RBP12.97□□□□□ -0.33
SMAD3-202ENST00000439724 SAMM50Q9Y512 469 aa12.97□□□□□ -0.33
SMAD3-202ENST00000439724 NFASCO94856 1347 aa12.96□□□□□ -0.33
SMAD3-202ENST00000439724 EIF3CLB5ME19 914 aaKnown RBP12.96□□□□□ -0.33
SMAD3-202ENST00000439724 TGFB1I1O43294 461 aa12.96□□□□□ -0.33
SMAD3-202ENST00000439724 KIF5CO60282 957 aa12.96□□□□□ -0.33
SMAD3-202ENST00000439724 HIP1RO75146 1068 aa12.96□□□□□ -0.33
SMAD3-202ENST00000439724 PPP1R37O75864 691 aa12.96□□□□□ -0.33
SMAD3-202ENST00000439724 CCNE2O96020 404 aa12.96□□□□□ -0.33
SMAD3-202ENST00000439724 RARRES1P49788 294 aa12.96□□□□□ -0.33
SMAD3-202ENST00000439724 PSMC5P62195 406 aa12.96□□□□□ -0.33
SMAD3-202ENST00000439724 ALCAMQ13740 583 aa12.96□□□□□ -0.33
SMAD3-202ENST00000439724 ODR4Q5SWX8 454 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms