RNA–Protein interactions for RNA: ENST00000439706.5

SLC38A1-202, Transcript of solute carrier family 38 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC38A1, Length 3,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1-202ENST00000439706 POTEBQ6S5H4 581 aa13.51□□□□□ -0.25
SLC38A1-202ENST00000439706 GPBP1Q86WP2 473 aa13.51□□□□□ -0.25
SLC38A1-202ENST00000439706 GUF1Q8N442 669 aaKnown RBP13.51□□□□□ -0.25
SLC38A1-202ENST00000439706 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.51□□□□□ -0.255e-16■■□□□ 12.3
SLC38A1-202ENST00000439706 FGFR1OP2Q9NVK5 253 aa13.51□□□□□ -0.25
SLC38A1-202ENST00000439706 SSU72P8A0A1W2PR75 194 aa13.51□□□□□ -0.25
SLC38A1-202ENST00000439706 H0Y3Z8 333 aa13.51□□□□□ -0.25
SLC38A1-202ENST00000439706 UBOX5O94941 541 aa13.51□□□□□ -0.25
SLC38A1-202ENST00000439706 TRIP13Q15645 432 aaPredicted RBP13.51□□□□□ -0.25
SLC38A1-202ENST00000439706 CCT6BQ92526 530 aa13.51□□□□□ -0.25
SLC38A1-202ENST00000439706 PNMA3Q9UL41 463 aa13.51□□□□□ -0.25
SLC38A1-202ENST00000439706 KIF1AQ12756 1690 aa13.51□□□□□ -0.25
SLC38A1-202ENST00000439706 BAZ2AQ9UIF9 1905 aaKnown RBP13.51□□□□□ -0.25
SLC38A1-202ENST00000439706 F8VZ95 297 aa13.51□□□□□ -0.25
SLC38A1-202ENST00000439706 PABPC4Q13310 644 aaKnown RBP eCLIP13.51□□□□□ -0.25
SLC38A1-202ENST00000439706 PICALMQ13492 652 aa13.51□□□□□ -0.25
SLC38A1-202ENST00000439706 ZNF526Q8TF50 670 aaPredicted RBP13.51□□□□□ -0.25
SLC38A1-202ENST00000439706 KLHL29Q96CT2 875 aa13.51□□□□□ -0.25
SLC38A1-202ENST00000439706 ZBTB10Q96DT7 871 aa13.51□□□□□ -0.25
SLC38A1-202ENST00000439706 RNF14Q9UBS8 474 aa13.51□□□□□ -0.25
SLC38A1-202ENST00000439706 TRPM3Q9HCF6 1732 aaPredicted RBP13.5□□□□□ -0.25
SLC38A1-202ENST00000439706 TMEM94Q12767 1356 aa13.5□□□□□ -0.25
SLC38A1-202ENST00000439706 EME2A4GXA9 379 aaPredicted RBP13.5□□□□□ -0.25
SLC38A1-202ENST00000439706 LGR5O75473 907 aa13.5□□□□□ -0.25
SLC38A1-202ENST00000439706 GNA11P29992 359 aa13.5□□□□□ -0.25
SLC38A1-202ENST00000439706 SLC8A1P32418 973 aa13.5□□□□□ -0.25
SLC38A1-202ENST00000439706 CASP5P51878 434 aa13.5□□□□□ -0.25
SLC38A1-202ENST00000439706 GRIK5Q16478 980 aa13.5□□□□□ -0.25
SLC38A1-202ENST00000439706 NUGGCQ68CJ6 796 aa13.5□□□□□ -0.25
SLC38A1-202ENST00000439706 FAXDC2Q96IV6 333 aa13.5□□□□□ -0.25
SLC38A1-202ENST00000439706 EMILIN3Q9NT22 766 aa13.5□□□□□ -0.25
SLC38A1-202ENST00000439706 NAGPAQ9UK23 515 aa13.5□□□□□ -0.25
SLC38A1-202ENST00000439706 HDAC9Q9UKV0 1011 aa13.5□□□□□ -0.25
SLC38A1-202ENST00000439706 MINPP1Q9UNW1 487 aa13.5□□□□□ -0.25
SLC38A1-202ENST00000439706 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.5□□□□□ -0.25
SLC38A1-202ENST00000439706 TJP1Q07157 1748 aa13.5□□□□□ -0.25
SLC38A1-202ENST00000439706 H2AFZP0C0S5 128 aa13.5□□□□□ -0.25
SLC38A1-202ENST00000439706 HIBADHP31937 336 aaKnown RBP13.5□□□□□ -0.25
SLC38A1-202ENST00000439706 CUL1Q13616 776 aa13.5□□□□□ -0.25
SLC38A1-202ENST00000439706 LONRF1Q17RB8 773 aa13.5□□□□□ -0.25
SLC38A1-202ENST00000439706 TBC1D10BQ4KMP7 808 aaPredicted RBP13.5□□□□□ -0.25
SLC38A1-202ENST00000439706 FAM47EQ6ZV65 393 aa13.5□□□□□ -0.25
SLC38A1-202ENST00000439706 H2AFVQ71UI9 128 aa13.5□□□□□ -0.25
SLC38A1-202ENST00000439706 ZNF572Q7Z3I7 529 aaPredicted RBP13.5□□□□□ -0.25
SLC38A1-202ENST00000439706 KRT25Q7Z3Z0 450 aa13.5□□□□□ -0.25
SLC38A1-202ENST00000439706 C18orf8Q96DM3 657 aa13.5□□□□□ -0.25
SLC38A1-202ENST00000439706 ZMYND12Q9H0C1 365 aa13.5□□□□□ -0.25
SLC38A1-202ENST00000439706 ERVK-5Q9HDB9 667 aa13.5□□□□□ -0.25
SLC38A1-202ENST00000439706 BTG4Q9NY30 223 aa13.5□□□□□ -0.25
SLC38A1-202ENST00000439706 PPP1R9AQ9ULJ8 1098 aa13.5□□□□□ -0.25
SLC38A1-202ENST00000439706 IGF2BP3O00425 579 aaKnown RBP eCLIP13.49□□□□□ -0.252e-6■■■■□ 20.3
SLC38A1-202ENST00000439706 ORC4O43929 436 aa13.49□□□□□ -0.25
SLC38A1-202ENST00000439706 MYL1P05976 194 aa13.49□□□□□ -0.25
SLC38A1-202ENST00000439706 PDHA1P08559 390 aa13.49□□□□□ -0.25
SLC38A1-202ENST00000439706 CASP4P49662 377 aa13.49□□□□□ -0.25
SLC38A1-202ENST00000439706 USP11P51784 963 aa13.49□□□□□ -0.25
SLC38A1-202ENST00000439706 DR1Q01658 176 aa13.49□□□□□ -0.25
SLC38A1-202ENST00000439706 KCNA1Q09470 495 aa13.49□□□□□ -0.25
SLC38A1-202ENST00000439706 BIRC3Q13489 604 aa13.49□□□□□ -0.25
SLC38A1-202ENST00000439706 EXOC3L4Q17RC7 722 aa13.49□□□□□ -0.25
SLC38A1-202ENST00000439706 ZNF746Q6NUN9 644 aaPredicted RBP13.49□□□□□ -0.25
SLC38A1-202ENST00000439706 PHLDB2Q86SQ0 1253 aa13.49□□□□□ -0.25
SLC38A1-202ENST00000439706 ZNF34Q8IZ26 560 aa13.49□□□□□ -0.25
SLC38A1-202ENST00000439706 RAD54LQ92698 747 aa13.49□□□□□ -0.25
SLC38A1-202ENST00000439706 ANKIB1Q9P2G1 1089 aa13.49□□□□□ -0.25
SLC38A1-202ENST00000439706 DAAM1Q9Y4D1 1078 aa13.49□□□□□ -0.25
SLC38A1-202ENST00000439706 PCDHGC5Q9Y5F6 944 aa13.49□□□□□ -0.25
SLC38A1-202ENST00000439706 DDX60Q8IY21 1712 aaKnown RBP13.49□□□□□ -0.25
SLC38A1-202ENST00000439706 CCDC189A1A4V9 331 aa13.49□□□□□ -0.25
SLC38A1-202ENST00000439706 TCP11X1B4DZS4 312 aa13.49□□□□□ -0.25
SLC38A1-202ENST00000439706 CETN3O15182 167 aa13.49□□□□□ -0.25
SLC38A1-202ENST00000439706 UCHL3P15374 230 aa13.49□□□□□ -0.25
SLC38A1-202ENST00000439706 SNAP25P60880 206 aa13.49□□□□□ -0.25
SLC38A1-202ENST00000439706 LRRC63Q05C16 580 aa13.49□□□□□ -0.25
SLC38A1-202ENST00000439706 CD302Q8IX05 232 aa13.49□□□□□ -0.25
SLC38A1-202ENST00000439706 AK8Q96MA6 479 aa13.49□□□□□ -0.25
SLC38A1-202ENST00000439706 MTA3Q9BTC8 594 aa13.49□□□□□ -0.25
SLC38A1-202ENST00000439706 AJAP1Q9UKB5 411 aaPredicted RBP13.49□□□□□ -0.25
SLC38A1-202ENST00000439706 PCDHA12Q9UN75 941 aa13.49□□□□□ -0.25
SLC38A1-202ENST00000439706 POTEFA5A3E0 1075 aa13.49□□□□□ -0.25
SLC38A1-202ENST00000439706 LCA5LO95447 670 aa13.49□□□□□ -0.25
SLC38A1-202ENST00000439706 ADAMTS2O95450 1211 aa13.49□□□□□ -0.25
SLC38A1-202ENST00000439706 POTEIP0CG38 1075 aa13.49□□□□□ -0.25
SLC38A1-202ENST00000439706 SNX1Q13596 522 aa13.49□□□□□ -0.25
SLC38A1-202ENST00000439706 POTEGQ6S5H5 508 aa13.49□□□□□ -0.25
SLC38A1-202ENST00000439706 POTEEQ6S8J3 1075 aa13.49□□□□□ -0.25
SLC38A1-202ENST00000439706 TPCN2Q8NHX9 752 aa13.49□□□□□ -0.25
SLC38A1-202ENST00000439706 ELMO3Q96BJ8 720 aa13.49□□□□□ -0.25
SLC38A1-202ENST00000439706 EYA3Q99504 573 aa13.49□□□□□ -0.25
SLC38A1-202ENST00000439706 POP1Q99575 1024 aaKnown RBP13.49□□□□□ -0.25
SLC38A1-202ENST00000439706 ECT2Q9H8V3 914 aa13.49□□□□□ -0.25
SLC38A1-202ENST00000439706 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.49□□□□□ -0.256e-8■□□□□ 9.8
SLC38A1-202ENST00000439706 NID2Q14112 1375 aa13.49□□□□□ -0.25
SLC38A1-202ENST00000439706 GLI3P10071 1580 aa13.49□□□□□ -0.25
SLC38A1-202ENST00000439706 EVI5O60447 810 aa13.48□□□□□ -0.25
SLC38A1-202ENST00000439706 TNFRSF8P28908 595 aa13.48□□□□□ -0.25
SLC38A1-202ENST00000439706 SESN3P58005 492 aa13.48□□□□□ -0.25
SLC38A1-202ENST00000439706 CAPN12Q6ZSI9 719 aa13.48□□□□□ -0.25
SLC38A1-202ENST00000439706 TRPM8Q7Z2W7 1104 aa13.48□□□□□ -0.25
SLC38A1-202ENST00000439706 ERICH1Q86X53 443 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms