RNA–Protein interactions for RNA: ENST00000439541.6

CBX5-202, Transcript of chromobox 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX5, Length 1,832 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-202ENST00000439541 NEK9Q8TD19 979 aa11.16□□□□□ -0.62
CBX5-202ENST00000439541 CUEDC2Q9H467 287 aa11.16□□□□□ -0.62
CBX5-202ENST00000439541 BMP2KQ9NSY1 1161 aaPredicted RBP11.16□□□□□ -0.62
CBX5-202ENST00000439541 SPTLC3Q9NUV7 552 aa11.16□□□□□ -0.62
CBX5-202ENST00000439541 MAN1B1Q9UKM7 699 aa11.16□□□□□ -0.62
CBX5-202ENST00000439541 PCDHA10Q9Y5I2 948 aa11.16□□□□□ -0.62
CBX5-202ENST00000439541 IGSF9BQ9UPX0 1349 aa11.15□□□□□ -0.62
CBX5-202ENST00000439541 RBM47A0AV96 593 aaKnown RBP11.15□□□□□ -0.62
CBX5-202ENST00000439541 BACH1O14867 736 aa11.15□□□□□ -0.62
CBX5-202ENST00000439541 TCF7P36402 384 aaPredicted RBP11.15□□□□□ -0.62
CBX5-202ENST00000439541 QARSP47897 775 aaKnown RBP11.15□□□□□ -0.62
CBX5-202ENST00000439541 SLC12A3P55017 1021 aa11.15□□□□□ -0.62
CBX5-202ENST00000439541 IRX5P78411 483 aaPredicted RBP11.15□□□□□ -0.62
CBX5-202ENST00000439541 UTP14CQ5TAP6 766 aaKnown RBP11.15□□□□□ -0.62
CBX5-202ENST00000439541 KANK3Q6NY19 840 aa11.15□□□□□ -0.62
CBX5-202ENST00000439541 C11orf57Q6ZUT1 292 aaPredicted RBP11.15□□□□□ -0.62
CBX5-202ENST00000439541 GPBP1Q86WP2 473 aa11.15□□□□□ -0.62
CBX5-202ENST00000439541 MSL3Q8N5Y2 521 aaKnown RBP11.15□□□□□ -0.62
CBX5-202ENST00000439541 MYRIPQ8NFW9 859 aa11.15□□□□□ -0.62
CBX5-202ENST00000439541 SMARCE1Q969G3 411 aa11.15□□□□□ -0.62
CBX5-202ENST00000439541 SPATA33Q96N06 139 aa11.15□□□□□ -0.62
CBX5-202ENST00000439541 PCYT2Q99447 389 aa11.15□□□□□ -0.62
CBX5-202ENST00000439541 GPR20Q99678 358 aa11.15□□□□□ -0.62
CBX5-202ENST00000439541 RUSC1Q9BVN2 902 aa11.15□□□□□ -0.62
CBX5-202ENST00000439541 TRIM9Q9C026 710 aa11.15□□□□□ -0.62
CBX5-202ENST00000439541 SAGE1Q9NXZ1 904 aa11.15□□□□□ -0.62
CBX5-202ENST00000439541 HOOK1Q9UJC3 728 aaKnown RBP11.15□□□□□ -0.62
CBX5-202ENST00000439541 TUBE1Q9UJT0 475 aa11.15□□□□□ -0.62
CBX5-202ENST00000439541 NOP56O00567 594 aaKnown RBP11.14□□□□□ -0.63
CBX5-202ENST00000439541 PSAPP07602 524 aa11.14□□□□□ -0.63
CBX5-202ENST00000439541 CYP11B2P19099 503 aa11.14□□□□□ -0.63
CBX5-202ENST00000439541 BMP6P22004 513 aa11.14□□□□□ -0.63
CBX5-202ENST00000439541 PSMC5P62195 406 aa11.14□□□□□ -0.63
CBX5-202ENST00000439541 ASIC1P78348 528 aa11.14□□□□□ -0.63
CBX5-202ENST00000439541 PRKCEQ02156 737 aa11.14□□□□□ -0.63
CBX5-202ENST00000439541 MIS18BP1Q6P0N0 1132 aa11.14□□□□□ -0.63
CBX5-202ENST00000439541 KCNV1Q6PIU1 500 aa11.14□□□□□ -0.63
CBX5-202ENST00000439541 SV2BQ7L1I2 683 aa11.14□□□□□ -0.63
CBX5-202ENST00000439541 ELOA2Q8IYF1 753 aaPredicted RBP11.14□□□□□ -0.63
CBX5-202ENST00000439541 SMYD4Q8IYR2 804 aaPredicted RBP11.14□□□□□ -0.63
CBX5-202ENST00000439541 GIMAP8Q8ND71 665 aaPredicted RBP11.14□□□□□ -0.63
CBX5-202ENST00000439541 RDM1Q8NG50 284 aa11.14□□□□□ -0.63
CBX5-202ENST00000439541 AFG1LQ8WV93 481 aa11.14□□□□□ -0.63
CBX5-202ENST00000439541 HPS3Q969F9 1004 aa11.14□□□□□ -0.63
CBX5-202ENST00000439541 DNAJC25Q9H1X3 360 aa11.14□□□□□ -0.63
CBX5-202ENST00000439541 ZSWIM4Q9H7M6 989 aa11.14□□□□□ -0.63
CBX5-202ENST00000439541 MAGEF1Q9HAY2 307 aa11.14□□□□□ -0.63
CBX5-202ENST00000439541 POLD4Q9HCU8 107 aa11.14□□□□□ -0.63
CBX5-202ENST00000439541 SRRDQ9UH36 339 aa11.14□□□□□ -0.63
CBX5-202ENST00000439541 DNM3Q9UQ16 869 aa11.14□□□□□ -0.63
CBX5-202ENST00000439541 STK24Q9Y6E0 443 aa11.14□□□□□ -0.63
CBX5-202ENST00000439541 CASP8AP2Q9UKL3 1982 aa11.14□□□□□ -0.63
CBX5-202ENST00000439541 SLC26A4O43511 780 aa11.14□□□□□ -0.63
CBX5-202ENST00000439541 KLRC4O43908 158 aa11.14□□□□□ -0.63
CBX5-202ENST00000439541 FKTNO75072 461 aa11.14□□□□□ -0.63
CBX5-202ENST00000439541 ATG7O95352 703 aa11.14□□□□□ -0.63
CBX5-202ENST00000439541 EYA4O95677 639 aa11.14□□□□□ -0.63
CBX5-202ENST00000439541 GH1P01241 217 aa11.14□□□□□ -0.63
CBX5-202ENST00000439541 RPN1P04843 607 aaKnown RBP11.14□□□□□ -0.63
CBX5-202ENST00000439541 XRCC5P13010 732 aaKnown RBP11.14□□□□□ -0.63
CBX5-202ENST00000439541 ATP4AP20648 1035 aa11.14□□□□□ -0.63
CBX5-202ENST00000439541 MARK3P27448 753 aa11.14□□□□□ -0.63
CBX5-202ENST00000439541 YWHABP31946 246 aaKnown RBP11.14□□□□□ -0.63
CBX5-202ENST00000439541 SARSP49591 514 aaKnown RBP11.14□□□□□ -0.63
CBX5-202ENST00000439541 ANO6Q4KMQ2 910 aa11.14□□□□□ -0.63
CBX5-202ENST00000439541 ARSHQ5FYA8 562 aa11.14□□□□□ -0.63
CBX5-202ENST00000439541 SPATA20Q8TB22 786 aa11.14□□□□□ -0.63
CBX5-202ENST00000439541 DDX12PQ92771 950 aa11.14□□□□□ -0.63
CBX5-202ENST00000439541 ZNF302Q9NR11 478 aa11.14□□□□□ -0.63
CBX5-202ENST00000439541 IGKV6D-21A0A0A0MT36 114 aa11.13□□□□□ -0.63
CBX5-202ENST00000439541 STBD1O95210 358 aa11.13□□□□□ -0.63
CBX5-202ENST00000439541 ZNF286BP0CG31 522 aa11.13□□□□□ -0.63
CBX5-202ENST00000439541 CYBAP13498 195 aa11.13□□□□□ -0.63
CBX5-202ENST00000439541 NPEPPSP55786 919 aa11.13□□□□□ -0.63
CBX5-202ENST00000439541 MAP2K1Q02750 393 aaPredicted RBP11.13□□□□□ -0.63
CBX5-202ENST00000439541 TNFAIP2Q03169 654 aa11.13□□□□□ -0.63
CBX5-202ENST00000439541 STX1AQ16623 288 aa11.13□□□□□ -0.63
CBX5-202ENST00000439541 KMT5BQ4FZB7 885 aa11.13□□□□□ -0.63
CBX5-202ENST00000439541 DUSP28Q4G0W2 176 aa11.13□□□□□ -0.63
CBX5-202ENST00000439541 NT5DC1Q5TFE4 455 aa11.13□□□□□ -0.63
CBX5-202ENST00000439541 ANO5Q75V66 913 aa11.13□□□□□ -0.63
CBX5-202ENST00000439541 SYT2Q8N9I0 419 aaPredicted RBP11.13□□□□□ -0.63
CBX5-202ENST00000439541 OR6J1Q8NGC5 347 aa11.13□□□□□ -0.63
CBX5-202ENST00000439541 SEPT1Q8WYJ6 367 aa11.13□□□□□ -0.63
CBX5-202ENST00000439541 ATP6V0A1Q93050 837 aa11.13□□□□□ -0.63
CBX5-202ENST00000439541 ERO1AQ96HE7 468 aa11.13□□□□□ -0.63
CBX5-202ENST00000439541 CCDC34Q96HJ3 373 aa11.13□□□□□ -0.63
CBX5-202ENST00000439541 NACC1Q96RE7 527 aa11.13□□□□□ -0.63
CBX5-202ENST00000439541 C7orf25Q9BPX7 421 aa11.13□□□□□ -0.63
CBX5-202ENST00000439541 SEPT9Q9UHD8 586 aaPredicted RBP11.13□□□□□ -0.63
CBX5-202ENST00000439541 WDR81Q562E7 1941 aa11.13□□□□□ -0.63
CBX5-202ENST00000439541 ARID2Q68CP9 1835 aa11.13□□□□□ -0.63
CBX5-202ENST00000439541 ARHGEF35A5YM69 484 aa11.12□□□□□ -0.63
CBX5-202ENST00000439541 RSPH10B2B2RC85 870 aa11.12□□□□□ -0.63
CBX5-202ENST00000439541 USO1O60763 962 aaKnown RBP11.12□□□□□ -0.63
CBX5-202ENST00000439541 SMC2O95347 1197 aa11.12□□□□□ -0.63
CBX5-202ENST00000439541 RSPH10BP0C881 870 aa11.12□□□□□ -0.63
CBX5-202ENST00000439541 PRKAR2AP13861 404 aaKnown RBP11.12□□□□□ -0.63
CBX5-202ENST00000439541 IDEP14735 1019 aa11.12□□□□□ -0.63
CBX5-202ENST00000439541 GTF2F1P35269 517 aaKnown RBP eCLIP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms