RNA–Protein interactions for RNA: ENST00000439274.6

APP-208, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 2,517 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-208ENST00000439274 CDC42EP5Q6NZY7 148 aa16.84■□□□□ 0.29
APP-208ENST00000439274 DDX42Q86XP3 938 aaKnown RBP eCLIP16.84■□□□□ 0.29
APP-208ENST00000439274 IKZF4Q9H2S9 585 aa16.84■□□□□ 0.29
APP-208ENST00000439274 MYH4Q9Y623 1939 aa16.84■□□□□ 0.29
APP-208ENST00000439274 MEIS2O14770 477 aa16.84■□□□□ 0.29
APP-208ENST00000439274 AFPP02771 609 aaKnown RBP16.84■□□□□ 0.29
APP-208ENST00000439274 CASP4P49662 377 aa16.84■□□□□ 0.29
APP-208ENST00000439274 CACNB3P54284 484 aa16.84■□□□□ 0.29
APP-208ENST00000439274 TNNC1P63316 161 aa16.84■□□□□ 0.29
APP-208ENST00000439274 EXOC3L4Q17RC7 722 aa16.84■□□□□ 0.29
APP-208ENST00000439274 DOK7Q18PE1 504 aa16.84■□□□□ 0.29
APP-208ENST00000439274 KNOP1Q1ED39 458 aaKnown RBP16.84■□□□□ 0.29
APP-208ENST00000439274 TCERG1LQ5VWI1 586 aa16.84■□□□□ 0.29
APP-208ENST00000439274 NAGPAQ9UK23 515 aa16.84■□□□□ 0.29
APP-208ENST00000439274 TMEM59LQ9UK28 342 aa16.84■□□□□ 0.29
APP-208ENST00000439274 SPATA31C1P0DKV0 1188 aa16.83■□□□□ 0.28
APP-208ENST00000439274 ARHGAP4P98171 946 aa16.83■□□□□ 0.28
APP-208ENST00000439274 CYP4A11Q02928 519 aa16.83■□□□□ 0.28
APP-208ENST00000439274 KCNA1Q09470 495 aa16.83■□□□□ 0.28
APP-208ENST00000439274 HLTFQ14527 1009 aaKnown RBP eCLIP16.83■□□□□ 0.28
APP-208ENST00000439274 PPP4R3CPQ6ZMV5 832 aa16.83■□□□□ 0.28
APP-208ENST00000439274 MREGQ8N565 214 aa16.83■□□□□ 0.28
APP-208ENST00000439274 ETNPPLQ8TBG4 499 aa16.83■□□□□ 0.28
APP-208ENST00000439274 DNAJC18Q9H819 358 aa16.83■□□□□ 0.28
APP-208ENST00000439274 PITPNM2Q9BZ72 1349 aa16.83■□□□□ 0.28
APP-208ENST00000439274 A0A087WUV0 522 aaPredicted RBP16.83■□□□□ 0.28
APP-208ENST00000439274 NDUFAB1O14561 156 aa16.83■□□□□ 0.28
APP-208ENST00000439274 CLIC2O15247 247 aa16.83■□□□□ 0.28
APP-208ENST00000439274 USP11P51784 963 aa16.83■□□□□ 0.28
APP-208ENST00000439274 ALKBH5Q6P6C2 394 aaKnown RBP16.83■□□□□ 0.28
APP-208ENST00000439274 MAATS1Q7Z4T9 603 aa16.83■□□□□ 0.28
APP-208ENST00000439274 LRRC57Q8N9N7 239 aa16.83■□□□□ 0.28
APP-208ENST00000439274 PLAAQ9Y263 795 aa16.83■□□□□ 0.28
APP-208ENST00000439274 ATAD5Q96QE3 1844 aa16.82■□□□□ 0.28
APP-208ENST00000439274 CYP3A7-CYP3A51PA0A087WV96 503 aa16.82■□□□□ 0.28
APP-208ENST00000439274 XRCC5P13010 732 aaKnown RBP16.82■□□□□ 0.28
APP-208ENST00000439274 EEF2P13639 858 aaKnown RBP16.82■□□□□ 0.28
APP-208ENST00000439274 CYP3A7P24462 503 aa16.82■□□□□ 0.28
APP-208ENST00000439274 ECHS1P30084 290 aa16.82■□□□□ 0.28
APP-208ENST00000439274 USH1GQ495M9 461 aa16.82■□□□□ 0.28
APP-208ENST00000439274 FRMD5Q7Z6J6 570 aa16.82■□□□□ 0.28
APP-208ENST00000439274 NAP1L4Q99733 375 aaKnown RBP16.82■□□□□ 0.28
APP-208ENST00000439274 TRAF3IP3Q9Y228 551 aa16.82■□□□□ 0.28
APP-208ENST00000439274 PCDHAC2Q9Y5I4 1007 aa16.82■□□□□ 0.28
APP-208ENST00000439274 FAM86B1E9PN63 330 aa16.81■□□□□ 0.28
APP-208ENST00000439274 FAM86B2P0C5J1 330 aa16.81■□□□□ 0.28
APP-208ENST00000439274 NR1D1P20393 614 aa16.81■□□□□ 0.28
APP-208ENST00000439274 TCP10Q12799 353 aa16.81■□□□□ 0.28
APP-208ENST00000439274 EPHA7Q15375 998 aa16.81■□□□□ 0.28
APP-208ENST00000439274 CEP85LQ5SZL2 805 aa16.81■□□□□ 0.28
APP-208ENST00000439274 SLC30A10Q6XR72 485 aa16.81■□□□□ 0.28
APP-208ENST00000439274 KDM7AQ6ZMT4 941 aa16.81■□□□□ 0.28
APP-208ENST00000439274 EPM2AIP1Q7L775 607 aaPredicted RBP16.81■□□□□ 0.28
APP-208ENST00000439274 SLFN12Q8IYM2 578 aa16.81■□□□□ 0.28
APP-208ENST00000439274 OR2W6PQ8NHA6 318 aa16.81■□□□□ 0.28
APP-208ENST00000439274 WHAMMQ8TF30 809 aa16.81■□□□□ 0.28
APP-208ENST00000439274 MBOAT7Q96N66 472 aa16.81■□□□□ 0.28
APP-208ENST00000439274 NEUROG2Q9H2A3 272 aa16.81■□□□□ 0.28
APP-208ENST00000439274 TAF1DQ9H5J8 278 aaPredicted RBP16.81■□□□□ 0.28
APP-208ENST00000439274 PLCB1Q9NQ66 1216 aa16.81■□□□□ 0.28
APP-208ENST00000439274 DNM3Q9UQ16 869 aa16.81■□□□□ 0.28
APP-208ENST00000439274 SFI1A8K8P3 1242 aa16.81■□□□□ 0.28
APP-208ENST00000439274 TMCO5BA8MYB1 307 aa16.81■□□□□ 0.28
APP-208ENST00000439274 HLA-DOAP06340 250 aa16.81■□□□□ 0.28
APP-208ENST00000439274 POLD1P28340 1107 aa16.81■□□□□ 0.28
APP-208ENST00000439274 DDR1Q08345 913 aa16.81■□□□□ 0.28
APP-208ENST00000439274 SLFN13Q68D06 897 aa16.81■□□□□ 0.28
APP-208ENST00000439274 METTL13Q8N6R0 699 aa16.81■□□□□ 0.28
APP-208ENST00000439274 SYT2Q8N9I0 419 aaPredicted RBP16.81■□□□□ 0.28
APP-208ENST00000439274 LENG9Q96B70 501 aa16.81■□□□□ 0.28
APP-208ENST00000439274 RUSC1Q9BVN2 902 aa16.81■□□□□ 0.28
APP-208ENST00000439274 DDX47Q9H0S4 455 aaKnown RBP16.81■□□□□ 0.28
APP-208ENST00000439274 CENPHQ9H3R5 247 aa16.81■□□□□ 0.28
APP-208ENST00000439274 SIX2Q9NPC8 291 aa16.81■□□□□ 0.28
APP-208ENST00000439274 ASTN1O14525 1302 aa16.81■□□□□ 0.28
APP-208ENST00000439274 BTNL10A8MVZ5 291 aa16.8■□□□□ 0.28
APP-208ENST00000439274 NR3C1P04150 777 aa16.8■□□□□ 0.28
APP-208ENST00000439274 ITGA4P13612 1032 aa16.8■□□□□ 0.28
APP-208ENST00000439274 LSP1P33241 339 aa16.8■□□□□ 0.28
APP-208ENST00000439274 APOBEC3HQ6NTF7 200 aaKnown RBP16.8■□□□□ 0.28
APP-208ENST00000439274 TPCN2Q8NHX9 752 aa16.8■□□□□ 0.28
APP-208ENST00000439274 CYP2W1Q8TAV3 490 aa16.8■□□□□ 0.28
APP-208ENST00000439274 SCFD2Q8WU76 684 aa16.8■□□□□ 0.28
APP-208ENST00000439274 ATP6V1G3Q96LB4 118 aa16.8■□□□□ 0.28
APP-208ENST00000439274 BHMT2Q9H2M3 363 aa16.8■□□□□ 0.28
APP-208ENST00000439274 NOC2LQ9Y3T9 749 aaKnown RBP16.8■□□□□ 0.28
APP-208ENST00000439274 GOLGB1Q14789 3259 aaKnown RBP16.8■□□□□ 0.28
APP-208ENST00000439274 PPEF1O14829 653 aaPredicted RBP16.8■□□□□ 0.28
APP-208ENST00000439274 ZBTB48P10074 688 aaPredicted RBP16.8■□□□□ 0.28
APP-208ENST00000439274 RXRBP28702 533 aa16.8■□□□□ 0.28
APP-208ENST00000439274 HSPA9P38646 679 aaKnown RBP16.8■□□□□ 0.28
APP-208ENST00000439274 CD302Q8IX05 232 aa16.8■□□□□ 0.28
APP-208ENST00000439274 CRYGNQ8WXF5 182 aa16.8■□□□□ 0.28
APP-208ENST00000439274 KAT2BQ92831 832 aa16.8■□□□□ 0.28
APP-208ENST00000439274 ISCUQ9H1K1 167 aa16.8■□□□□ 0.28
APP-208ENST00000439274 GCNT4Q9P109 453 aa16.8■□□□□ 0.28
APP-208ENST00000439274 PCDHB13Q9Y5F0 798 aa16.8■□□□□ 0.28
APP-208ENST00000439274 MYO3BQ8WXR4 1341 aa16.8■□□□□ 0.28
APP-208ENST00000439274 GCNT3O95395 438 aa16.79■□□□□ 0.28
APP-208ENST00000439274 RPA1P27694 616 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms