RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 ECT2Q9H8V3 914 aa14.58□□□□□ -0.08
ACTN1-204ENST00000438964 SAMD15Q9P1V8 674 aa14.58□□□□□ -0.08
ACTN1-204ENST00000438964 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.58□□□□□ -0.08
ACTN1-204ENST00000438964 FRMPD2Q68DX3 1309 aaPredicted RBP14.58□□□□□ -0.08
ACTN1-204ENST00000438964 DUOX1Q9NRD9 1551 aa14.58□□□□□ -0.08
ACTN1-204ENST00000438964 MARCH6O60337 910 aa14.58□□□□□ -0.08
ACTN1-204ENST00000438964 EVI5O60447 810 aa14.58□□□□□ -0.08
ACTN1-204ENST00000438964 USP11P51784 963 aa14.58□□□□□ -0.08
ACTN1-204ENST00000438964 SARNPP82979 210 aaKnown RBP14.58□□□□□ -0.08
ACTN1-204ENST00000438964 CUL1Q13616 776 aa14.58□□□□□ -0.08
ACTN1-204ENST00000438964 ARMC3Q5W041 872 aa14.58□□□□□ -0.08
ACTN1-204ENST00000438964 CCDC50Q8IVM0 306 aa14.58□□□□□ -0.08
ACTN1-204ENST00000438964 MYOCDQ8IZQ8 938 aa14.58□□□□□ -0.08
ACTN1-204ENST00000438964 SPDYE1Q8NFV5 336 aaPredicted RBP14.58□□□□□ -0.08
ACTN1-204ENST00000438964 ZNF483Q8TF39 744 aaPredicted RBP14.58□□□□□ -0.08
ACTN1-204ENST00000438964 RNF25Q96BH1 459 aaPredicted RBP14.58□□□□□ -0.08
ACTN1-204ENST00000438964 ZNF317Q96PQ6 595 aaPredicted RBP14.58□□□□□ -0.08
ACTN1-204ENST00000438964 PIGSQ96S52 555 aa14.58□□□□□ -0.08
ACTN1-204ENST00000438964 TSG101Q99816 390 aa14.58□□□□□ -0.08
ACTN1-204ENST00000438964 RNF14Q9UBS8 474 aa14.58□□□□□ -0.08
ACTN1-204ENST00000438964 UTP11Q9Y3A2 253 aaKnown RBP14.58□□□□□ -0.08
ACTN1-204ENST00000438964 C5orf60A6NFR6 353 aa14.57□□□□□ -0.08
ACTN1-204ENST00000438964 TNNI2P48788 182 aa14.57□□□□□ -0.08
ACTN1-204ENST00000438964 INHBEP58166 350 aa14.57□□□□□ -0.08
ACTN1-204ENST00000438964 UNC13DQ70J99 1090 aa14.57□□□□□ -0.08
ACTN1-204ENST00000438964 NEK8Q86SG6 692 aa14.57□□□□□ -0.08
ACTN1-204ENST00000438964 RBM46Q8TBY0 533 aaKnown RBP14.57□□□□□ -0.08
ACTN1-204ENST00000438964 ADAM7Q9H2U9 754 aa14.57□□□□□ -0.08
ACTN1-204ENST00000438964 TIAM2Q8IVF5 1701 aa14.57□□□□□ -0.08
ACTN1-204ENST00000438964 PHRF1Q9P1Y6 1649 aaKnown RBP14.57□□□□□ -0.08
ACTN1-204ENST00000438964 RGS16O15492 202 aaPredicted RBP14.57□□□□□ -0.08
ACTN1-204ENST00000438964 DNAJC8O75937 253 aaPredicted RBP14.57□□□□□ -0.08
ACTN1-204ENST00000438964 TSPY3P0CV98 308 aa14.57□□□□□ -0.08
ACTN1-204ENST00000438964 TSPY8P0CW00 308 aa14.57□□□□□ -0.08
ACTN1-204ENST00000438964 EVA1CP58658 441 aa14.57□□□□□ -0.08
ACTN1-204ENST00000438964 KCNH2Q12809 1159 aa14.57□□□□□ -0.08
ACTN1-204ENST00000438964 COASYQ13057 564 aa14.57□□□□□ -0.08
ACTN1-204ENST00000438964 CALCRLQ16602 461 aa14.57□□□□□ -0.08
ACTN1-204ENST00000438964 LACTB2Q53H82 288 aaPredicted RBP14.57□□□□□ -0.08
ACTN1-204ENST00000438964 CAPRIN2Q6IMN6 1127 aaKnown RBP14.57□□□□□ -0.08
ACTN1-204ENST00000438964 CLEC10AQ8IUN9 316 aa14.57□□□□□ -0.08
ACTN1-204ENST00000438964 KDM4CQ9H3R0 1056 aa14.57□□□□□ -0.08
ACTN1-204ENST00000438964 BARHL2Q9NY43 387 aa14.57□□□□□ -0.08
ACTN1-204ENST00000438964 MAP3K13O43283 966 aa14.56□□□□□ -0.08
ACTN1-204ENST00000438964 PDHA1P08559 390 aa14.56□□□□□ -0.08
ACTN1-204ENST00000438964 UBE2SQ16763 222 aa14.56□□□□□ -0.08
ACTN1-204ENST00000438964 HERC4Q5GLZ8 1057 aaPredicted RBP14.56□□□□□ -0.08
ACTN1-204ENST00000438964 LUC7LQ9NQ29 371 aaKnown RBP14.56□□□□□ -0.08
ACTN1-204ENST00000438964 CTNNAL1Q9UBT7 734 aa14.56□□□□□ -0.08
ACTN1-204ENST00000438964 PPP1R9AQ9ULJ8 1098 aa14.56□□□□□ -0.08
ACTN1-204ENST00000438964 MYH3P11055 1940 aa14.56□□□□□ -0.08
ACTN1-204ENST00000438964 TAF1P21675 1872 aa14.56□□□□□ -0.08
ACTN1-204ENST00000438964 GFPT2O94808 682 aa14.56□□□□□ -0.08
ACTN1-204ENST00000438964 ADAM9Q13443 819 aa14.56□□□□□ -0.08
ACTN1-204ENST00000438964 DIXDC1Q155Q3 683 aa14.56□□□□□ -0.08
ACTN1-204ENST00000438964 GNPTABQ3T906 1256 aa14.56□□□□□ -0.08
ACTN1-204ENST00000438964 GUF1Q8N442 669 aaKnown RBP14.56□□□□□ -0.08
ACTN1-204ENST00000438964 TPCN2Q8NHX9 752 aa14.56□□□□□ -0.08
ACTN1-204ENST00000438964 ATP8B4Q8TF62 1192 aa14.56□□□□□ -0.08
ACTN1-204ENST00000438964 ATXN2LQ8WWM7 1075 aaKnown RBP14.56□□□□□ -0.08
ACTN1-204ENST00000438964 KLHL29Q96CT2 875 aa14.56□□□□□ -0.08
ACTN1-204ENST00000438964 C18orf8Q96DM3 657 aa14.56□□□□□ -0.08
ACTN1-204ENST00000438964 MTA3Q9BTC8 594 aa14.56□□□□□ -0.08
ACTN1-204ENST00000438964 ADAM33Q9BZ11 813 aa14.56□□□□□ -0.08
ACTN1-204ENST00000438964 NAGPAQ9UK23 515 aa14.56□□□□□ -0.08
ACTN1-204ENST00000438964 BCORQ6W2J9 1755 aa14.56□□□□□ -0.08
ACTN1-204ENST00000438964 COL4A1P02462 1669 aa14.56□□□□□ -0.08
ACTN1-204ENST00000438964 CICQ96RK0 1608 aaPredicted RBP14.55□□□□□ -0.08
ACTN1-204ENST00000438964 TCP11X1B4DZS4 312 aa14.55□□□□□ -0.08
ACTN1-204ENST00000438964 H0Y3Z8 333 aa14.55□□□□□ -0.08
ACTN1-204ENST00000438964 RBAK-RBAKDNI3L0D1 243 aa14.55□□□□□ -0.08
ACTN1-204ENST00000438964 GH1P01241 217 aa14.55□□□□□ -0.08
ACTN1-204ENST00000438964 CYP19A1P11511 503 aaPredicted RBP14.55□□□□□ -0.08
ACTN1-204ENST00000438964 PLCG2P16885 1265 aa14.55□□□□□ -0.08
ACTN1-204ENST00000438964 ATF3P18847 181 aa14.55□□□□□ -0.08
ACTN1-204ENST00000438964 CASP5P51878 434 aa14.55□□□□□ -0.08
ACTN1-204ENST00000438964 FKBP3Q00688 224 aaKnown RBP14.55□□□□□ -0.08
ACTN1-204ENST00000438964 LONRF1Q17RB8 773 aa14.55□□□□□ -0.08
ACTN1-204ENST00000438964 SH3RF3Q8TEJ3 882 aaPredicted RBP14.55□□□□□ -0.08
ACTN1-204ENST00000438964 ZMYND12Q9H0C1 365 aa14.55□□□□□ -0.08
ACTN1-204ENST00000438964 EPB41L4BQ9H329 900 aa14.55□□□□□ -0.08
ACTN1-204ENST00000438964 GGA2Q9UJY4 613 aa14.55□□□□□ -0.08
ACTN1-204ENST00000438964 NIP7Q9Y221 180 aaKnown RBP eCLIP14.55□□□□□ -0.08
ACTN1-204ENST00000438964 IGSF9BQ9UPX0 1349 aa14.55□□□□□ -0.08
ACTN1-204ENST00000438964 MYL1P05976 194 aa14.55□□□□□ -0.08
ACTN1-204ENST00000438964 NCALDP61601 193 aa14.55□□□□□ -0.08
ACTN1-204ENST00000438964 LRRC57Q8N9N7 239 aa14.55□□□□□ -0.08
ACTN1-204ENST00000438964 BRIP1Q9BX63 1249 aa14.55□□□□□ -0.08
ACTN1-204ENST00000438964 ZMYND8Q9ULU4 1186 aaPredicted RBP14.55□□□□□ -0.08
ACTN1-204ENST00000438964 KCNQ4P56696 695 aa14.55□□□□□ -0.08
ACTN1-204ENST00000438964 FAM26FQ5R3K3 315 aa14.55□□□□□ -0.08
ACTN1-204ENST00000438964 AGBL2Q5U5Z8 902 aa14.55□□□□□ -0.08
ACTN1-204ENST00000438964 DCAF12L1Q5VU92 463 aa14.55□□□□□ -0.08
ACTN1-204ENST00000438964 DENND2CQ68D51 928 aa14.55□□□□□ -0.08
ACTN1-204ENST00000438964 NSUN4Q96CB9 384 aaKnown RBP14.55□□□□□ -0.08
ACTN1-204ENST00000438964 POP1Q99575 1024 aaKnown RBP14.55□□□□□ -0.08
ACTN1-204ENST00000438964 TMEM47Q9BQJ4 181 aa14.55□□□□□ -0.08
ACTN1-204ENST00000438964 KCNK9Q9NPC2 374 aa14.55□□□□□ -0.08
ACTN1-204ENST00000438964 TBK1Q9UHD2 729 aa14.55□□□□□ -0.08
ACTN1-204ENST00000438964 SLC12A4Q9UP95 1085 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms