RNA–Protein interactions for RNA: ENST00000436554.5

LINC00271-202, long intergenic non-protein coding RNA 271, humanhuman

TSL 5 BASIC

Gene LINC00271, Length 655 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-202ENST00000436554 PIK3CDO00329 1044 aa13.28□□□□□ -0.28
LINC00271-202ENST00000436554 ATF7P17544 494 aaPredicted RBP13.28□□□□□ -0.28
LINC00271-202ENST00000436554 ERVFC1P60507 584 aa13.28□□□□□ -0.28
LINC00271-202ENST00000436554 IRX6P78412 446 aaPredicted RBP13.28□□□□□ -0.28
LINC00271-202ENST00000436554 PAK2Q13177 524 aa13.28□□□□□ -0.28
LINC00271-202ENST00000436554 WTAPQ15007 396 aa13.28□□□□□ -0.28
LINC00271-202ENST00000436554 DUSP6Q16828 381 aa13.28□□□□□ -0.28
LINC00271-202ENST00000436554 TMEM266Q2M3C6 531 aa13.28□□□□□ -0.28
LINC00271-202ENST00000436554 SPOUT1Q5T280 376 aaKnown RBP13.28□□□□□ -0.28
LINC00271-202ENST00000436554 CATIPQ7Z7H3 387 aa13.28□□□□□ -0.28
LINC00271-202ENST00000436554 SMC5Q8IY18 1101 aa13.28□□□□□ -0.28
LINC00271-202ENST00000436554 CDHR1Q96JP9 859 aa13.28□□□□□ -0.28
LINC00271-202ENST00000436554 PCYT2Q99447 389 aa13.28□□□□□ -0.28
LINC00271-202ENST00000436554 CELF4Q9BZC1 486 aaKnown RBP13.28□□□□□ -0.28
LINC00271-202ENST00000436554 IRF2BPLQ9H1B7 796 aa13.28□□□□□ -0.28
LINC00271-202ENST00000436554 TLR9Q9NR96 1032 aa13.28□□□□□ -0.28
LINC00271-202ENST00000436554 PCDHB7Q9Y5E2 793 aa13.28□□□□□ -0.28
LINC00271-202ENST00000436554 PCDHB12Q9Y5F1 795 aa13.28□□□□□ -0.28
LINC00271-202ENST00000436554 PCDHA2Q9Y5H9 948 aa13.28□□□□□ -0.28
LINC00271-202ENST00000436554 ZFHX2Q9C0A1 2572 aaPredicted RBP13.28□□□□□ -0.28
LINC00271-202ENST00000436554 KAT6AQ92794 2004 aa13.28□□□□□ -0.28
LINC00271-202ENST00000436554 M0QZ92 97 aa13.27□□□□□ -0.29
LINC00271-202ENST00000436554 PDGFBP01127 241 aaPredicted RBP13.27□□□□□ -0.29
LINC00271-202ENST00000436554 RPLP2P05387 115 aaKnown RBP13.27□□□□□ -0.29
LINC00271-202ENST00000436554 UBE3AQ05086 875 aa13.27□□□□□ -0.29
LINC00271-202ENST00000436554 NFX1Q12986 1120 aaKnown RBP13.27□□□□□ -0.29
LINC00271-202ENST00000436554 FAM102BQ5T8I3 360 aa13.27□□□□□ -0.29
LINC00271-202ENST00000436554 TRAPPC12Q8WVT3 735 aa13.27□□□□□ -0.29
LINC00271-202ENST00000436554 RRP36Q96EU6 259 aaKnown RBP13.27□□□□□ -0.29
LINC00271-202ENST00000436554 NEK1Q96PY6 1258 aa13.27□□□□□ -0.29
LINC00271-202ENST00000436554 APOL5Q9BWW9 433 aa13.27□□□□□ -0.29
LINC00271-202ENST00000436554 S1PR5Q9H228 398 aa13.27□□□□□ -0.29
LINC00271-202ENST00000436554 PSTPIP2Q9H939 334 aa13.27□□□□□ -0.29
LINC00271-202ENST00000436554 UBIAD1Q9Y5Z9 338 aa13.27□□□□□ -0.29
LINC00271-202ENST00000436554 IGSF9BQ9UPX0 1349 aa13.27□□□□□ -0.29
LINC00271-202ENST00000436554 DOCK5Q9H7D0 1870 aa13.27□□□□□ -0.29
LINC00271-202ENST00000436554 PTPRZ1P23471 2315 aaPredicted RBP13.27□□□□□ -0.29
LINC00271-202ENST00000436554 TBKBP1A7MCY6 615 aa13.26□□□□□ -0.29
LINC00271-202ENST00000436554 FGF18O76093 207 aa13.26□□□□□ -0.29
LINC00271-202ENST00000436554 CYP21A2P08686 494 aa13.26□□□□□ -0.29
LINC00271-202ENST00000436554 SARSP49591 514 aaKnown RBP13.26□□□□□ -0.29
LINC00271-202ENST00000436554 KRT76Q01546 638 aa13.26□□□□□ -0.29
LINC00271-202ENST00000436554 MTMR1Q13613 665 aa13.26□□□□□ -0.29
LINC00271-202ENST00000436554 PLCB4Q15147 1175 aa13.26□□□□□ -0.29
LINC00271-202ENST00000436554 PTPN21Q16825 1174 aa13.26□□□□□ -0.29
LINC00271-202ENST00000436554 NME8Q8N427 588 aa13.26□□□□□ -0.29
LINC00271-202ENST00000436554 IGDCC4Q8TDY8 1250 aa13.26□□□□□ -0.29
LINC00271-202ENST00000436554 RIPOR3Q96MK2 946 aa13.26□□□□□ -0.29
LINC00271-202ENST00000436554 CDCA3Q99618 268 aaPredicted RBP13.26□□□□□ -0.29
LINC00271-202ENST00000436554 RWDD1Q9H446 243 aaPredicted RBP13.26□□□□□ -0.29
LINC00271-202ENST00000436554 AZI2Q9H6S1 392 aa13.26□□□□□ -0.29
LINC00271-202ENST00000436554 CDHR5Q9HBB8 845 aa13.26□□□□□ -0.29
LINC00271-202ENST00000436554 JADE2Q9NQC1 790 aa13.26□□□□□ -0.29
LINC00271-202ENST00000436554 AAASQ9NRG9 546 aa13.26□□□□□ -0.29
LINC00271-202ENST00000436554 TYW1Q9NV66 732 aaKnown RBP13.26□□□□□ -0.29
LINC00271-202ENST00000436554 TMEM260Q9NX78 707 aa13.26□□□□□ -0.29
LINC00271-202ENST00000436554 TRPC6Q9Y210 931 aa13.26□□□□□ -0.29
LINC00271-202ENST00000436554 TAF6LQ9Y6J9 622 aa13.26□□□□□ -0.29
LINC00271-202ENST00000436554 MAFGO15525 162 aa13.25□□□□□ -0.29
LINC00271-202ENST00000436554 MGEA5O60502 916 aa13.25□□□□□ -0.29
LINC00271-202ENST00000436554 IGHDP01880 384 aa13.25□□□□□ -0.29
LINC00271-202ENST00000436554 SP100P23497 879 aaPredicted RBP13.25□□□□□ -0.29
LINC00271-202ENST00000436554 TECP42680 631 aa13.25□□□□□ -0.29
LINC00271-202ENST00000436554 NUCB1Q02818 461 aa13.25□□□□□ -0.29
LINC00271-202ENST00000436554 PTH1RQ03431 593 aa13.25□□□□□ -0.29
LINC00271-202ENST00000436554 SART3Q15020 963 aaKnown RBP13.25□□□□□ -0.29
LINC00271-202ENST00000436554 ANKRD54Q6NXT1 300 aa13.25□□□□□ -0.29
LINC00271-202ENST00000436554 SYCE2Q6PIF2 218 aa13.25□□□□□ -0.29
LINC00271-202ENST00000436554 TMEM184AQ6ZMB5 413 aa13.25□□□□□ -0.29
LINC00271-202ENST00000436554 ZBTB33Q86T24 672 aa13.25□□□□□ -0.29
LINC00271-202ENST00000436554 THNSL1Q8IYQ7 743 aa13.25□□□□□ -0.29
LINC00271-202ENST00000436554 TNPO1Q92973 898 aaKnown RBP13.25□□□□□ -0.29
LINC00271-202ENST00000436554 ADAM2Q99965 735 aa13.25□□□□□ -0.29
LINC00271-202ENST00000436554 MYL10Q9BUA6 226 aa13.25□□□□□ -0.29
LINC00271-202ENST00000436554 SPZ1Q9BXG8 430 aa13.25□□□□□ -0.29
LINC00271-202ENST00000436554 HCSTQ9UBK5 93 aa13.25□□□□□ -0.29
LINC00271-202ENST00000436554 SEC63Q9UGP8 760 aaKnown RBP13.25□□□□□ -0.29
LINC00271-202ENST00000436554 GINS2Q9Y248 185 aa13.25□□□□□ -0.29
LINC00271-202ENST00000436554 NOC2LQ9Y3T9 749 aaKnown RBP13.25□□□□□ -0.29
LINC00271-202ENST00000436554 KDM3AQ9Y4C1 1321 aa13.24□□□□□ -0.29
LINC00271-202ENST00000436554 SMIM35A0A1B0GVV1 85 aa13.24□□□□□ -0.29
LINC00271-202ENST00000436554 E7EWF7 191 aa13.24□□□□□ -0.29
LINC00271-202ENST00000436554 FSCN2O14926 492 aa13.24□□□□□ -0.29
LINC00271-202ENST00000436554 KLRC1P26715 233 aa13.24□□□□□ -0.29
LINC00271-202ENST00000436554 SMARCA1P28370 1054 aa13.24□□□□□ -0.29
LINC00271-202ENST00000436554 STAT5BP51692 787 aa13.24□□□□□ -0.29
LINC00271-202ENST00000436554 APOBRQ0VD83 1088 aa13.24□□□□□ -0.29
LINC00271-202ENST00000436554 KCNC3Q14003 757 aa13.24□□□□□ -0.29
LINC00271-202ENST00000436554 UBE2SQ16763 222 aa13.24□□□□□ -0.29
LINC00271-202ENST00000436554 PLPP4Q5VZY2 271 aa13.24□□□□□ -0.29
LINC00271-202ENST00000436554 PDE12Q6L8Q7 609 aaKnown RBP13.24□□□□□ -0.29
LINC00271-202ENST00000436554 MTHFD1LQ6UB35 978 aa13.24□□□□□ -0.29
LINC00271-202ENST00000436554 PLPPR4Q7Z2D5 763 aa13.24□□□□□ -0.29
LINC00271-202ENST00000436554 RALYLQ86SE5 291 aaKnown RBP13.24□□□□□ -0.29
LINC00271-202ENST00000436554 CMTR1Q8N1G2 835 aaKnown RBP13.24□□□□□ -0.29
LINC00271-202ENST00000436554 SRBD1Q8N5C6 995 aaKnown RBP13.24□□□□□ -0.29
LINC00271-202ENST00000436554 COLGALT1Q8NBJ5 622 aa13.24□□□□□ -0.29
LINC00271-202ENST00000436554 NCOA7Q8NI08 942 aa13.24□□□□□ -0.29
LINC00271-202ENST00000436554 CTCFLQ8NI51 663 aaPredicted RBP13.24□□□□□ -0.29
LINC00271-202ENST00000436554 ERVK-5Q9HDB9 667 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms