RNA–Protein interactions for RNA: ENST00000436289.6

NELFE-204, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 906 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-204ENST00000436289 ZFP91Q96JP5 570 aaPredicted RBP17.3■□□□□ 0.36
NELFE-204ENST00000436289 KRT23Q9C075 422 aa17.3■□□□□ 0.36
NELFE-204ENST00000436289 C1orf112Q9NSG2 853 aa17.3■□□□□ 0.36
NELFE-204ENST00000436289 RTEL1Q9NZ71 1219 aa17.3■□□□□ 0.36
NELFE-204ENST00000436289 RCAN3Q9UKA8 241 aa17.3■□□□□ 0.36
NELFE-204ENST00000436289 TRPV2Q9Y5S1 764 aa17.3■□□□□ 0.36
NELFE-204ENST00000436289 ZNF292O60281 2723 aa17.3■□□□□ 0.36
NELFE-204ENST00000436289 IGSF9BQ9UPX0 1349 aa17.29■□□□□ 0.36
NELFE-204ENST00000436289 KDM3AQ9Y4C1 1321 aa17.29■□□□□ 0.36
NELFE-204ENST00000436289 CACNA1BQ00975 2339 aa17.29■□□□□ 0.36
NELFE-204ENST00000436289 BRD1O95696 1058 aa17.29■□□□□ 0.36
NELFE-204ENST00000436289 ERVFC1P60507 584 aa17.29■□□□□ 0.36
NELFE-204ENST00000436289 PLCB3Q01970 1234 aa17.29■□□□□ 0.36
NELFE-204ENST00000436289 SEMA3FQ13275 785 aa17.29■□□□□ 0.36
NELFE-204ENST00000436289 IFIT1BQ5T764 474 aaKnown RBP17.29■□□□□ 0.36
NELFE-204ENST00000436289 PCNX4Q63HM2 1172 aa17.29■□□□□ 0.36
NELFE-204ENST00000436289 STAG2Q8N3U4 1231 aa17.29■□□□□ 0.36
NELFE-204ENST00000436289 GLG1Q92896 1179 aa17.29■□□□□ 0.36
NELFE-204ENST00000436289 ADAM7Q9H2U9 754 aa17.29■□□□□ 0.36
NELFE-204ENST00000436289 RIOX1Q9H6W3 641 aa17.29■□□□□ 0.36
NELFE-204ENST00000436289 CNNM2Q9H8M5 875 aa17.29■□□□□ 0.36
NELFE-204ENST00000436289 SUPT16HQ9Y5B9 1047 aaKnown RBP17.29■□□□□ 0.36
NELFE-204ENST00000436289 PCDHGC5Q9Y5F6 944 aa17.29■□□□□ 0.36
NELFE-204ENST00000436289 SALL3Q9BXA9 1300 aa17.28■□□□□ 0.36
NELFE-204ENST00000436289 PNMA6FA0A0J9YX94 578 aa17.28■□□□□ 0.36
NELFE-204ENST00000436289 PALM3A6NDB9 673 aaPredicted RBP17.28■□□□□ 0.36
NELFE-204ENST00000436289 LAG3P18627 525 aa17.28■□□□□ 0.36
NELFE-204ENST00000436289 MTHFRP42898 656 aa17.28■□□□□ 0.36
NELFE-204ENST00000436289 ZNF589Q86UQ0 364 aaPredicted RBP17.28■□□□□ 0.36
NELFE-204ENST00000436289 ZDHHC14Q8IZN3 488 aa17.28■□□□□ 0.36
NELFE-204ENST00000436289 MRPS27Q92552 414 aaKnown RBP17.28■□□□□ 0.36
NELFE-204ENST00000436289 CELF4Q9BZC1 486 aaKnown RBP17.28■□□□□ 0.36
NELFE-204ENST00000436289 TSHZ2Q9NRE2 1034 aa17.28■□□□□ 0.36
NELFE-204ENST00000436289 MAD2L2Q9UI95 211 aa17.28■□□□□ 0.36
NELFE-204ENST00000436289 PCDHA2Q9Y5H9 948 aa17.28■□□□□ 0.36
NELFE-204ENST00000436289 VPS13AQ96RL7 3174 aa17.28■□□□□ 0.36
NELFE-204ENST00000436289 WDR87Q6ZQQ6 2873 aa17.27■□□□□ 0.36
NELFE-204ENST00000436289 MYO10Q9HD67 2058 aa17.27■□□□□ 0.36
NELFE-204ENST00000436289 B4E1Z4 1266 aa17.27■□□□□ 0.36
NELFE-204ENST00000436289 MAFGO15525 162 aa17.27■□□□□ 0.36
NELFE-204ENST00000436289 RBM10P98175 930 aaKnown RBP17.27■□□□□ 0.36
NELFE-204ENST00000436289 SP4Q02446 784 aa17.27■□□□□ 0.36
NELFE-204ENST00000436289 KRT17Q04695 432 aa17.27■□□□□ 0.36
NELFE-204ENST00000436289 BMS1Q14692 1282 aaKnown RBP17.27■□□□□ 0.36
NELFE-204ENST00000436289 SLC24A5Q71RS6 500 aa17.27■□□□□ 0.36
NELFE-204ENST00000436289 GPRASP2Q96D09 838 aa17.27■□□□□ 0.36
NELFE-204ENST00000436289 USTQ9Y2C2 406 aa17.27■□□□□ 0.36
NELFE-204ENST00000436289 DMDP11532 3685 aa17.27■□□□□ 0.35
NELFE-204ENST00000436289 TBKBP1A7MCY6 615 aa17.26■□□□□ 0.35
NELFE-204ENST00000436289 PPM1AP35813 382 aa17.26■□□□□ 0.35
NELFE-204ENST00000436289 NMIQ13287 307 aaPredicted RBP17.26■□□□□ 0.35
NELFE-204ENST00000436289 IMMTQ16891 758 aaKnown RBP17.26■□□□□ 0.35
NELFE-204ENST00000436289 C20orf194Q5TEA3 1177 aa17.26■□□□□ 0.35
NELFE-204ENST00000436289 DGLUCYQ7Z3D6 616 aa17.26■□□□□ 0.35
NELFE-204ENST00000436289 HOMER1Q86YM7 354 aa17.26■□□□□ 0.35
NELFE-204ENST00000436289 COLGALT1Q8NBJ5 622 aa17.26■□□□□ 0.35
NELFE-204ENST00000436289 CUL5Q93034 780 aa17.26■□□□□ 0.35
NELFE-204ENST00000436289 TCF25Q9BQ70 676 aa17.26■□□□□ 0.35
NELFE-204ENST00000436289 RTP3Q9BQQ7 232 aa17.26■□□□□ 0.35
NELFE-204ENST00000436289 FAM49AQ9H0Q0 323 aaPredicted RBP17.26■□□□□ 0.35
NELFE-204ENST00000436289 TYW1Q9NV66 732 aaKnown RBP17.26■□□□□ 0.35
NELFE-204ENST00000436289 GSTTP1A0A1W2PQM5 241 aa17.25■□□□□ 0.35
NELFE-204ENST00000436289 C2CD4DB7Z1M9 353 aa17.25■□□□□ 0.35
NELFE-204ENST00000436289 INSRRP14616 1297 aa17.25■□□□□ 0.35
NELFE-204ENST00000436289 PDE1AP54750 535 aa17.25■□□□□ 0.35
NELFE-204ENST00000436289 KRT76Q01546 638 aa17.25■□□□□ 0.35
NELFE-204ENST00000436289 PUM1Q14671 1186 aaKnown RBP eCLIP17.25■□□□□ 0.35
NELFE-204ENST00000436289 SMARCC2Q8TAQ2 1214 aa17.25■□□□□ 0.35
NELFE-204ENST00000436289 PIGSQ96S52 555 aa17.25■□□□□ 0.35
NELFE-204ENST00000436289 AZI2Q9H6S1 392 aa17.25■□□□□ 0.35
NELFE-204ENST00000436289 ELAC1Q9H777 363 aaKnown RBP17.25■□□□□ 0.35
NELFE-204ENST00000436289 ENTPD7Q9NQZ7 604 aa17.25■□□□□ 0.35
NELFE-204ENST00000436289 RGS18Q9NS28 235 aa17.25■□□□□ 0.35
NELFE-204ENST00000436289 EPG5Q9HCE0 2579 aa17.24■□□□□ 0.35
NELFE-204ENST00000436289 SMIM35A0A1B0GVV1 85 aa17.24■□□□□ 0.35
NELFE-204ENST00000436289 DENND3A2RUS2 1198 aa17.24■□□□□ 0.35
NELFE-204ENST00000436289 PIK3CDO00329 1044 aa17.24■□□□□ 0.35
NELFE-204ENST00000436289 HOXA2O43364 376 aa17.24■□□□□ 0.35
NELFE-204ENST00000436289 LMNAP02545 664 aaKnown RBP17.24■□□□□ 0.35
NELFE-204ENST00000436289 AOC1P19801 751 aa17.24■□□□□ 0.35
NELFE-204ENST00000436289 MARK3P27448 753 aa17.24■□□□□ 0.35
NELFE-204ENST00000436289 IGBP1P78318 339 aa17.24■□□□□ 0.35
NELFE-204ENST00000436289 NFX1Q12986 1120 aaKnown RBP17.24■□□□□ 0.35
NELFE-204ENST00000436289 ATAT1Q5SQI0 421 aa17.24■□□□□ 0.35
NELFE-204ENST00000436289 PLPP4Q5VZY2 271 aa17.24■□□□□ 0.35
NELFE-204ENST00000436289 TMX1Q9H3N1 280 aa17.24■□□□□ 0.35
NELFE-204ENST00000436289 ATP6V0A4Q9HBG4 840 aa17.24■□□□□ 0.35
NELFE-204ENST00000436289 GPR182O15218 404 aa17.23■□□□□ 0.35
NELFE-204ENST00000436289 KCNA2P16389 499 aa17.23■□□□□ 0.35
NELFE-204ENST00000436289 SP100P23497 879 aaPredicted RBP17.23■□□□□ 0.35
NELFE-204ENST00000436289 GATMP50440 423 aa17.23■□□□□ 0.35
NELFE-204ENST00000436289 LLGL2Q6P1M3 1020 aa17.23■□□□□ 0.35
NELFE-204ENST00000436289 TMC7Q7Z402 723 aa17.23■□□□□ 0.35
NELFE-204ENST00000436289 CCDC105Q8IYK2 499 aa17.23■□□□□ 0.35
NELFE-204ENST00000436289 MRPL43Q8N983 215 aaKnown RBP17.23■□□□□ 0.35
NELFE-204ENST00000436289 TDRD5Q8NAT2 981 aaKnown RBP17.23■□□□□ 0.35
NELFE-204ENST00000436289 KCNG4Q8TDN1 519 aa17.23■□□□□ 0.35
NELFE-204ENST00000436289 APOL5Q9BWW9 433 aa17.23■□□□□ 0.35
NELFE-204ENST00000436289 POMKQ9H5K3 350 aa17.23■□□□□ 0.35
NELFE-204ENST00000436289 TMEM161AQ9NX61 479 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms