RNA–Protein interactions for RNA: ENST00000435891.5

CLSTN1-203, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 3,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-203ENST00000435891 SLC18A3Q16572 532 aa11.43□□□□□ -0.58
CLSTN1-203ENST00000435891 MSL1Q68DK7 614 aa11.43□□□□□ -0.58
CLSTN1-203ENST00000435891 MMS22LQ6ZRQ5 1243 aa11.43□□□□□ -0.58
CLSTN1-203ENST00000435891 ZC3H3Q8IXZ2 948 aaKnown RBP11.43□□□□□ -0.58
CLSTN1-203ENST00000435891 RUSC1Q9BVN2 902 aa11.43□□□□□ -0.58
CLSTN1-203ENST00000435891 PI4KBQ9UBF8 816 aa11.43□□□□□ -0.58
CLSTN1-203ENST00000435891 A0A1W2PRG0 241 aa11.43□□□□□ -0.58
CLSTN1-203ENST00000435891 FAM170AA1A519 330 aa11.43□□□□□ -0.58
CLSTN1-203ENST00000435891 AKAP3O75969 853 aa11.43□□□□□ -0.58
CLSTN1-203ENST00000435891 KLHL30Q0D2K2 578 aa11.43□□□□□ -0.58
CLSTN1-203ENST00000435891 KIAA0753Q2KHM9 967 aa11.43□□□□□ -0.58
CLSTN1-203ENST00000435891 DCAF4Q8WV16 495 aa11.43□□□□□ -0.58
CLSTN1-203ENST00000435891 BHMT2Q9H2M3 363 aa11.43□□□□□ -0.58
CLSTN1-203ENST00000435891 HDAC9Q9UKV0 1011 aa11.43□□□□□ -0.58
CLSTN1-203ENST00000435891 MSH4O15457 936 aa11.42□□□□□ -0.58
CLSTN1-203ENST00000435891 GLI1P08151 1106 aa11.42□□□□□ -0.58
CLSTN1-203ENST00000435891 SATB1Q01826 763 aa11.42□□□□□ -0.58
CLSTN1-203ENST00000435891 PTK2Q05397 1052 aa11.42□□□□□ -0.58
CLSTN1-203ENST00000435891 TRADDQ15628 312 aa11.42□□□□□ -0.58
CLSTN1-203ENST00000435891 AMNQ9BXJ7 453 aa11.42□□□□□ -0.58
CLSTN1-203ENST00000435891 ACBD3Q9H3P7 528 aa11.42□□□□□ -0.58
CLSTN1-203ENST00000435891 DONSONQ9NYP3 566 aa11.42□□□□□ -0.58
CLSTN1-203ENST00000435891 CETN3O15182 167 aa11.42□□□□□ -0.58
CLSTN1-203ENST00000435891 CLIC2O15247 247 aa11.42□□□□□ -0.58
CLSTN1-203ENST00000435891 RPA1P27694 616 aa11.42□□□□□ -0.58
CLSTN1-203ENST00000435891 RDXP35241 583 aaKnown RBP11.42□□□□□ -0.58
CLSTN1-203ENST00000435891 ITIH3Q06033 890 aa11.42□□□□□ -0.58
CLSTN1-203ENST00000435891 NAB2Q15742 525 aa11.42□□□□□ -0.58
CLSTN1-203ENST00000435891 IQCEQ6IPM2 695 aa11.42□□□□□ -0.58
CLSTN1-203ENST00000435891 TATDN1Q6P1N9 297 aa11.42□□□□□ -0.58
CLSTN1-203ENST00000435891 LRRC31Q6UY01 552 aa11.42□□□□□ -0.58
CLSTN1-203ENST00000435891 ZNF571Q7Z3V5 609 aaPredicted RBP11.42□□□□□ -0.58
CLSTN1-203ENST00000435891 IRF2BP2Q7Z5L9 587 aa11.42□□□□□ -0.58
CLSTN1-203ENST00000435891 SYT2Q8N9I0 419 aaPredicted RBP11.42□□□□□ -0.58
CLSTN1-203ENST00000435891 RBM46Q8TBY0 533 aaKnown RBP11.42□□□□□ -0.58
CLSTN1-203ENST00000435891 SYN2Q92777 582 aaPredicted RBP11.42□□□□□ -0.58
CLSTN1-203ENST00000435891 TDRD3Q9H7E2 651 aaKnown RBP11.42□□□□□ -0.58
CLSTN1-203ENST00000435891 GH2P01242 217 aa11.42□□□□□ -0.58
CLSTN1-203ENST00000435891 MMP10P09238 476 aa11.42□□□□□ -0.58
CLSTN1-203ENST00000435891 DACT2Q5SW24 774 aa11.42□□□□□ -0.58
CLSTN1-203ENST00000435891 GJB7Q6PEY0 223 aa11.42□□□□□ -0.58
CLSTN1-203ENST00000435891 SLFN12Q8IYM2 578 aa11.42□□□□□ -0.58
CLSTN1-203ENST00000435891 RNF10Q8N5U6 811 aaKnown RBP11.42□□□□□ -0.58
CLSTN1-203ENST00000435891 PIGOQ8TEQ8 1089 aa11.42□□□□□ -0.58
CLSTN1-203ENST00000435891 AIPL1Q9NZN9 384 aa11.42□□□□□ -0.58
CLSTN1-203ENST00000435891 STIM2Q9P246 746 aa11.42□□□□□ -0.58
CLSTN1-203ENST00000435891 VAV3Q9UKW4 847 aa11.42□□□□□ -0.58
CLSTN1-203ENST00000435891 PITPNM2Q9BZ72 1349 aa11.42□□□□□ -0.58
CLSTN1-203ENST00000435891 COL11A2P13942 1736 aaPredicted RBP11.41□□□□□ -0.58
CLSTN1-203ENST00000435891 GRID2IPA4D2P6 1211 aa11.41□□□□□ -0.58
CLSTN1-203ENST00000435891 GOLGA6BA6NDN3 693 aa11.41□□□□□ -0.58
CLSTN1-203ENST00000435891 GNA14O95837 355 aa11.41□□□□□ -0.58
CLSTN1-203ENST00000435891 EPS15P42566 896 aa11.41□□□□□ -0.58
CLSTN1-203ENST00000435891 KNOP1Q1ED39 458 aaKnown RBP11.41□□□□□ -0.58
CLSTN1-203ENST00000435891 EDRF1Q3B7T1 1238 aa11.41□□□□□ -0.58
CLSTN1-203ENST00000435891 DCAF17Q5H9S7 520 aaPredicted RBP11.41□□□□□ -0.58
CLSTN1-203ENST00000435891 KIAA1755Q5JYT7 1200 aa11.41□□□□□ -0.58
CLSTN1-203ENST00000435891 EPM2AIP1Q7L775 607 aaPredicted RBP11.41□□□□□ -0.58
CLSTN1-203ENST00000435891 FBXO11Q86XK2 927 aa11.41□□□□□ -0.58
CLSTN1-203ENST00000435891 AFAP1L1Q8TED9 768 aa11.41□□□□□ -0.58
CLSTN1-203ENST00000435891 DNM3Q9UQ16 869 aa11.41□□□□□ -0.58
CLSTN1-203ENST00000435891 ECM2O94769 699 aaPredicted RBP11.41□□□□□ -0.58
CLSTN1-203ENST00000435891 UCHL3P15374 230 aa11.41□□□□□ -0.58
CLSTN1-203ENST00000435891 AP3B2Q13367 1082 aa11.41□□□□□ -0.58
CLSTN1-203ENST00000435891 PODNQ7Z5L7 613 aa11.41□□□□□ -0.58
CLSTN1-203ENST00000435891 KSR1Q8IVT5 923 aa11.41□□□□□ -0.58
CLSTN1-203ENST00000435891 ASTN1O14525 1302 aa11.41□□□□□ -0.58
CLSTN1-203ENST00000435891 SPDYE3A6NKU9 549 aa11.41□□□□□ -0.58
CLSTN1-203ENST00000435891 FAM153BP0C7A2 387 aa11.41□□□□□ -0.58
CLSTN1-203ENST00000435891 PON1P27169 355 aa11.41□□□□□ -0.58
CLSTN1-203ENST00000435891 SREBF1P36956 1147 aa11.41□□□□□ -0.58
CLSTN1-203ENST00000435891 USP8P40818 1118 aa11.41□□□□□ -0.58
CLSTN1-203ENST00000435891 ECE1P42892 770 aa11.41□□□□□ -0.58
CLSTN1-203ENST00000435891 PAFAH1B1P43034 410 aa11.41□□□□□ -0.58
CLSTN1-203ENST00000435891 CARSP49589 748 aaKnown RBP11.41□□□□□ -0.58
CLSTN1-203ENST00000435891 UBXN2AP68543 259 aa11.41□□□□□ -0.58
CLSTN1-203ENST00000435891 ASIC2Q16515 512 aa11.41□□□□□ -0.58
CLSTN1-203ENST00000435891 ABCB5Q2M3G0 1257 aa11.41□□□□□ -0.58
CLSTN1-203ENST00000435891 FAM153CQ494X1 144 aa11.41□□□□□ -0.58
CLSTN1-203ENST00000435891 Q4G0T1 1027 aa11.41□□□□□ -0.58
CLSTN1-203ENST00000435891 SYDE2Q5VT97 1194 aa11.41□□□□□ -0.58
CLSTN1-203ENST00000435891 C8orf74Q6P047 294 aa11.41□□□□□ -0.58
CLSTN1-203ENST00000435891 GBP6Q6ZN66 633 aa11.41□□□□□ -0.58
CLSTN1-203ENST00000435891 IDI2Q9BXS1 227 aa11.41□□□□□ -0.58
CLSTN1-203ENST00000435891 CENPHQ9H3R5 247 aa11.41□□□□□ -0.58
CLSTN1-203ENST00000435891 SLC24A3Q9HC58 644 aa11.41□□□□□ -0.58
CLSTN1-203ENST00000435891 ARMCX3Q9UH62 379 aaPredicted RBP11.41□□□□□ -0.58
CLSTN1-203ENST00000435891 FAM153AQ9UHL3 310 aa11.41□□□□□ -0.58
CLSTN1-203ENST00000435891 TRPC5Q9UL62 973 aaPredicted RBP11.41□□□□□ -0.58
CLSTN1-203ENST00000435891 TRAF3IP3Q9Y228 551 aa11.41□□□□□ -0.58
CLSTN1-203ENST00000435891 ECE2O60344 883 aa11.4□□□□□ -0.58
CLSTN1-203ENST00000435891 ERLIN2O94905 339 aa11.4□□□□□ -0.58
CLSTN1-203ENST00000435891 ALDH1B1P30837 517 aa11.4□□□□□ -0.58
CLSTN1-203ENST00000435891 BIRC2Q13490 618 aa11.4□□□□□ -0.58
CLSTN1-203ENST00000435891 CTTNQ14247 550 aaKnown RBP11.4□□□□□ -0.58
CLSTN1-203ENST00000435891 TCERG1LQ5VWI1 586 aa11.4□□□□□ -0.58
CLSTN1-203ENST00000435891 NAP1L4Q99733 375 aaKnown RBP11.4□□□□□ -0.58
CLSTN1-203ENST00000435891 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.4□□□□□ -0.58
CLSTN1-203ENST00000435891 PCDHGC5Q9Y5F6 944 aa11.4□□□□□ -0.58
CLSTN1-203ENST00000435891 NEBLO76041 1014 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms