RNA–Protein interactions for RNA: ENST00000433645.1

LINC01239-201, Transcript of long intergenic non-protein coding RNA 1239, humanhuman

TSL 3

Gene LINC01239, Length 325 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01239-201ENST00000433645 ZCCHC14Q8WYQ9 949 aaKnown RBP4.92□□□□□ -1.62
LINC01239-201ENST00000433645 LCORQ96JN0 433 aaPredicted RBP4.92□□□□□ -1.62
LINC01239-201ENST00000433645 TEPSINQ96N21 525 aa4.92□□□□□ -1.62
LINC01239-201ENST00000433645 SPATA25Q9BR10 227 aa4.92□□□□□ -1.62
LINC01239-201ENST00000433645 BTBD2Q9BX70 525 aa4.92□□□□□ -1.62
LINC01239-201ENST00000433645 TMEM168Q9H0V1 697 aa4.92□□□□□ -1.62
LINC01239-201ENST00000433645 RTEL1Q9NZ71 1219 aa4.92□□□□□ -1.62
LINC01239-201ENST00000433645 RBPJLQ9UBG7 517 aa4.92□□□□□ -1.62
LINC01239-201ENST00000433645 CROTQ9UKG9 612 aa4.92□□□□□ -1.62
LINC01239-201ENST00000433645 ZKSCAN5Q9Y2L8 839 aa4.92□□□□□ -1.62
LINC01239-201ENST00000433645 A0A087X0B3 334 aa4.91□□□□□ -1.62
LINC01239-201ENST00000433645 MROH6A6NGR9 719 aa4.91□□□□□ -1.62
LINC01239-201ENST00000433645 GSG1L2A8MUP6 293 aa4.91□□□□□ -1.62
LINC01239-201ENST00000433645 H0Y858 1186 aa4.91□□□□□ -1.62
LINC01239-201ENST00000433645 GOLGA6L22H0YM25 854 aa4.91□□□□□ -1.62
LINC01239-201ENST00000433645 KLHL18O94889 574 aa4.91□□□□□ -1.62
LINC01239-201ENST00000433645 MPIG6BO95866 241 aa4.91□□□□□ -1.62
LINC01239-201ENST00000433645 IL18BPO95998 194 aa4.91□□□□□ -1.62
LINC01239-201ENST00000433645 INHBBP09529 407 aa4.91□□□□□ -1.62
LINC01239-201ENST00000433645 NEK4P51957 841 aa4.91□□□□□ -1.62
LINC01239-201ENST00000433645 OCRLQ01968 901 aa4.91□□□□□ -1.62
LINC01239-201ENST00000433645 DSG1Q02413 1049 aa4.91□□□□□ -1.62
LINC01239-201ENST00000433645 EPHA7Q15375 998 aa4.91□□□□□ -1.62
LINC01239-201ENST00000433645 ZNF174Q15697 407 aa4.91□□□□□ -1.62
LINC01239-201ENST00000433645 RGL3Q3MIN7 710 aa4.91□□□□□ -1.62
LINC01239-201ENST00000433645 CATSPEREQ5SY80 951 aa4.91□□□□□ -1.62
LINC01239-201ENST00000433645 TRMT10BQ6PF06 316 aaKnown RBP4.91□□□□□ -1.62
LINC01239-201ENST00000433645 DHX37Q8IY37 1157 aaKnown RBP4.91□□□□□ -1.62
LINC01239-201ENST00000433645 ZZZ3Q8IYH5 903 aa4.91□□□□□ -1.62
LINC01239-201ENST00000433645 CALML6Q8TD86 181 aa4.91□□□□□ -1.62
LINC01239-201ENST00000433645 AJUBAQ96IF1 538 aa4.91□□□□□ -1.62
LINC01239-201ENST00000433645 ZSWIM3Q96MP5 696 aa4.91□□□□□ -1.62
LINC01239-201ENST00000433645 GBP4Q96PP9 640 aa4.91□□□□□ -1.62
LINC01239-201ENST00000433645 FOXB1Q99853 325 aa4.91□□□□□ -1.62
LINC01239-201ENST00000433645 TARS2Q9BW92 718 aaKnown RBP4.91□□□□□ -1.62
LINC01239-201ENST00000433645 KATNBL1Q9H079 304 aa4.91□□□□□ -1.62
LINC01239-201ENST00000433645 BARX1Q9HBU1 254 aaPredicted RBP4.91□□□□□ -1.62
LINC01239-201ENST00000433645 SLC39A2Q9NP94 309 aa4.91□□□□□ -1.62
LINC01239-201ENST00000433645 ADAM29Q9UKF5 820 aa4.91□□□□□ -1.62
LINC01239-201ENST00000433645 SPO11Q9Y5K1 396 aa4.91□□□□□ -1.62
LINC01239-201ENST00000433645 RASSF10A6NK89 507 aa4.9□□□□□ -1.63
LINC01239-201ENST00000433645 KCNK3O14649 394 aa4.9□□□□□ -1.63
LINC01239-201ENST00000433645 GAS7O60861 476 aa4.9□□□□□ -1.63
LINC01239-201ENST00000433645 MMEP08473 750 aa4.9□□□□□ -1.63
LINC01239-201ENST00000433645 POLD1P28340 1107 aa4.9□□□□□ -1.63
LINC01239-201ENST00000433645 ECE1P42892 770 aa4.9□□□□□ -1.63
LINC01239-201ENST00000433645 ADCY1Q08828 1119 aa4.9□□□□□ -1.63
LINC01239-201ENST00000433645 SURF1Q15526 300 aa4.9□□□□□ -1.63
LINC01239-201ENST00000433645 NT5DC1Q5TFE4 455 aa4.9□□□□□ -1.63
LINC01239-201ENST00000433645 CREB3L3Q68CJ9 461 aa4.9□□□□□ -1.63
LINC01239-201ENST00000433645 FSTL4Q6MZW2 842 aa4.9□□□□□ -1.63
LINC01239-201ENST00000433645 PLEKHH3Q7Z736 793 aa4.9□□□□□ -1.63
LINC01239-201ENST00000433645 LGI4Q8N135 537 aa4.9□□□□□ -1.63
LINC01239-201ENST00000433645 EFHBQ8N7U6 833 aa4.9□□□□□ -1.63
LINC01239-201ENST00000433645 STPG3Q8N7X2 389 aa4.9□□□□□ -1.63
LINC01239-201ENST00000433645 MBD6Q96DN6 1003 aa4.9□□□□□ -1.63
LINC01239-201ENST00000433645 C16orf92Q96LL3 132 aa4.9□□□□□ -1.63
LINC01239-201ENST00000433645 USP40Q9NVE5 1235 aa4.9□□□□□ -1.63
LINC01239-201ENST00000433645 IFT57Q9NWB7 429 aa4.9□□□□□ -1.63
LINC01239-201ENST00000433645 CNOT11Q9UKZ1 510 aaKnown RBP4.9□□□□□ -1.63
LINC01239-201ENST00000433645 PRKAB1Q9Y478 270 aa4.9□□□□□ -1.63
LINC01239-201ENST00000433645 OTOL1A6NHN0 477 aaPredicted RBP4.89□□□□□ -1.63
LINC01239-201ENST00000433645 DVL2O14641 736 aa4.89□□□□□ -1.63
LINC01239-201ENST00000433645 PDE8AO60658 829 aa4.89□□□□□ -1.63
LINC01239-201ENST00000433645 CYP1A1P04798 512 aaPredicted RBP4.89□□□□□ -1.63
LINC01239-201ENST00000433645 HOXA5P20719 270 aa4.89□□□□□ -1.63
LINC01239-201ENST00000433645 GLRBP48167 497 aa4.89□□□□□ -1.63
LINC01239-201ENST00000433645 KIF11P52732 1056 aa4.89□□□□□ -1.63
LINC01239-201ENST00000433645 ALDH6A1Q02252 535 aaKnown RBP4.89□□□□□ -1.63
LINC01239-201ENST00000433645 NFATC3Q12968 1075 aa4.89□□□□□ -1.63
LINC01239-201ENST00000433645 TMEM132BQ14DG7 1078 aa4.89□□□□□ -1.63
LINC01239-201ENST00000433645 DHCR24Q15392 516 aa4.89□□□□□ -1.63
LINC01239-201ENST00000433645 GPR158Q5T848 1215 aa4.89□□□□□ -1.63
LINC01239-201ENST00000433645 EGFLAMQ63HQ2 1017 aa4.89□□□□□ -1.63
LINC01239-201ENST00000433645 KANK2Q63ZY3 851 aa4.89□□□□□ -1.63
LINC01239-201ENST00000433645 MCTP2Q6DN12 878 aa4.89□□□□□ -1.63
LINC01239-201ENST00000433645 CNNM4Q6P4Q7 775 aa4.89□□□□□ -1.63
LINC01239-201ENST00000433645 Q6ZUG5 572 aa4.89□□□□□ -1.63
LINC01239-201ENST00000433645 RTN4RL1Q86UN2 441 aaPredicted RBP4.89□□□□□ -1.63
LINC01239-201ENST00000433645 PASD1Q8IV76 773 aa4.89□□□□□ -1.63
LINC01239-201ENST00000433645 KIAA1958Q8N8K9 716 aa4.89□□□□□ -1.63
LINC01239-201ENST00000433645 HIPK4Q8NE63 616 aa4.89□□□□□ -1.63
LINC01239-201ENST00000433645 FEZF2Q8TBJ5 459 aa4.89□□□□□ -1.63
LINC01239-201ENST00000433645 FOXRED1Q96CU9 486 aaPredicted RBP4.89□□□□□ -1.63
LINC01239-201ENST00000433645 AMNQ9BXJ7 453 aa4.89□□□□□ -1.63
LINC01239-201ENST00000433645 KRTAP9-9Q9BYP9 154 aa4.89□□□□□ -1.63
LINC01239-201ENST00000433645 KRTAP9-4Q9BYQ2 154 aa4.89□□□□□ -1.63
LINC01239-201ENST00000433645 OR10A5Q9H207 317 aa4.89□□□□□ -1.63
LINC01239-201ENST00000433645 PCIF1Q9H4Z3 704 aa4.89□□□□□ -1.63
LINC01239-201ENST00000433645 OXSMQ9NWU1 459 aa4.89□□□□□ -1.63
LINC01239-201ENST00000433645 CADPSQ9ULU8 1353 aa4.89□□□□□ -1.63
LINC01239-201ENST00000433645 KPNA6O60684 536 aa4.88□□□□□ -1.63
LINC01239-201ENST00000433645 VIL1P09327 827 aaKnown RBP4.88□□□□□ -1.63
LINC01239-201ENST00000433645 MYCLP1P12525 358 aaPredicted RBP4.88□□□□□ -1.63
LINC01239-201ENST00000433645 ATP2A2P16615 1042 aaKnown RBP4.88□□□□□ -1.63
LINC01239-201ENST00000433645 SCNN1BP51168 640 aa4.88□□□□□ -1.63
LINC01239-201ENST00000433645 PHC1P78364 1004 aa4.88□□□□□ -1.63
LINC01239-201ENST00000433645 IL13RA1P78552 427 aa4.88□□□□□ -1.63
LINC01239-201ENST00000433645 LRRC32Q14392 662 aa4.88□□□□□ -1.63
LINC01239-201ENST00000433645 C21orf62-AS1Q17RA5 79 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms