RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 SCN5AQ14524 2016 aa17.43■□□□□ 0.38
TREX1-201ENST00000433541 DDX11L8A8MPP1 907 aa17.42■□□□□ 0.38
TREX1-201ENST00000433541 OATP04181 439 aa17.42■□□□□ 0.38
TREX1-201ENST00000433541 THPOP40225 353 aa17.42■□□□□ 0.38
TREX1-201ENST00000433541 PSMC5P62195 406 aa17.42■□□□□ 0.38
TREX1-201ENST00000433541 TPH2Q8IWU9 490 aa17.42■□□□□ 0.38
TREX1-201ENST00000433541 ERMNQ8TAM6 284 aa17.42■□□□□ 0.38
TREX1-201ENST00000433541 CAGE1Q8TC20 777 aa17.42■□□□□ 0.38
TREX1-201ENST00000433541 MTMR9Q96QG7 549 aa17.42■□□□□ 0.38
TREX1-201ENST00000433541 ZSCAN16Q9H4T2 348 aaPredicted RBP17.42■□□□□ 0.38
TREX1-201ENST00000433541 CEP131Q9UPN4 1083 aa17.42■□□□□ 0.38
TREX1-201ENST00000433541 UMODL1Q5DID0 1318 aa17.42■□□□□ 0.38
TREX1-201ENST00000433541 LAD1O00515 517 aa17.41■□□□□ 0.38
TREX1-201ENST00000433541 P4HBP07237 508 aaKnown RBP17.41■□□□□ 0.38
TREX1-201ENST00000433541 PDIA4P13667 645 aaKnown RBP17.41■□□□□ 0.38
TREX1-201ENST00000433541 QARSP47897 775 aaKnown RBP17.41■□□□□ 0.38
TREX1-201ENST00000433541 CTTNQ14247 550 aaKnown RBP17.41■□□□□ 0.38
TREX1-201ENST00000433541 HIC1Q14526 733 aa17.41■□□□□ 0.38
TREX1-201ENST00000433541 EPHA7Q15375 998 aa17.41■□□□□ 0.38
TREX1-201ENST00000433541 MTERF2Q49AM1 385 aa17.41■□□□□ 0.38
TREX1-201ENST00000433541 ZNF484Q5JVG2 852 aa17.41■□□□□ 0.38
TREX1-201ENST00000433541 MFSD5Q6N075 450 aa17.41■□□□□ 0.38
TREX1-201ENST00000433541 RSPH3Q86UC2 560 aa17.41■□□□□ 0.38
TREX1-201ENST00000433541 SERINC5Q86VE9 423 aa17.41■□□□□ 0.38
TREX1-201ENST00000433541 SCLYQ96I15 445 aa17.41■□□□□ 0.38
TREX1-201ENST00000433541 DYDC2Q96IM9 177 aa17.41■□□□□ 0.38
TREX1-201ENST00000433541 EIF2AK1Q9BQI3 630 aaKnown RBP17.41■□□□□ 0.38
TREX1-201ENST00000433541 LXNQ9BS40 222 aa17.41■□□□□ 0.38
TREX1-201ENST00000433541 FAM49AQ9H0Q0 323 aaPredicted RBP17.41■□□□□ 0.38
TREX1-201ENST00000433541 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.41■□□□□ 0.38
TREX1-201ENST00000433541 COL1A2P08123 1366 aa17.4■□□□□ 0.38
TREX1-201ENST00000433541 ARID2Q68CP9 1835 aa17.4■□□□□ 0.38
TREX1-201ENST00000433541 PITPNM1O00562 1244 aa17.4■□□□□ 0.38
TREX1-201ENST00000433541 CTSHP09668 335 aa17.4■□□□□ 0.38
TREX1-201ENST00000433541 ITGB8P26012 769 aa17.4■□□□□ 0.38
TREX1-201ENST00000433541 ANP32AP39687 249 aaKnown RBP17.4■□□□□ 0.38
TREX1-201ENST00000433541 CEBPZQ03701 1054 aaKnown RBP17.4■□□□□ 0.38
TREX1-201ENST00000433541 RESTQ13127 1097 aa17.4■□□□□ 0.38
TREX1-201ENST00000433541 PPIGQ13427 754 aaKnown RBP eCLIP17.4■□□□□ 0.38
TREX1-201ENST00000433541 B3GNT9Q6UX72 402 aa17.4■□□□□ 0.38
TREX1-201ENST00000433541 DTHD1Q6ZMT9 781 aa17.4■□□□□ 0.38
TREX1-201ENST00000433541 METTL13Q8N6R0 699 aa17.4■□□□□ 0.38
TREX1-201ENST00000433541 NEK9Q8TD19 979 aa17.4■□□□□ 0.38
TREX1-201ENST00000433541 ZBTB10Q96DT7 871 aa17.4■□□□□ 0.38
TREX1-201ENST00000433541 RGL1Q9NZL6 768 aa17.4■□□□□ 0.38
TREX1-201ENST00000433541 LOXHD1Q8IVV2 1947 aa17.4■□□□□ 0.38
TREX1-201ENST00000433541 M0QZ92 97 aa17.39■□□□□ 0.37
TREX1-201ENST00000433541 ZNF862O60290 1169 aa17.39■□□□□ 0.37
TREX1-201ENST00000433541 BMP15O95972 392 aa17.39■□□□□ 0.37
TREX1-201ENST00000433541 CKBP12277 381 aa17.39■□□□□ 0.37
TREX1-201ENST00000433541 CSF2RAP15509 400 aa17.39■□□□□ 0.37
TREX1-201ENST00000433541 SELPP16109 830 aa17.39■□□□□ 0.37
TREX1-201ENST00000433541 ATP4AP20648 1035 aa17.39■□□□□ 0.37
TREX1-201ENST00000433541 KLRC1P26715 233 aa17.39■□□□□ 0.37
TREX1-201ENST00000433541 SPIRE1Q08AE8 756 aa17.39■□□□□ 0.37
TREX1-201ENST00000433541 SF3A1Q15459 793 aaKnown RBP17.39■□□□□ 0.37
TREX1-201ENST00000433541 FOXD4L6Q3SYB3 417 aaPredicted RBP17.39■□□□□ 0.37
TREX1-201ENST00000433541 XKR3Q5GH77 459 aa17.39■□□□□ 0.37
TREX1-201ENST00000433541 HAUS3Q68CZ6 603 aa17.39■□□□□ 0.37
TREX1-201ENST00000433541 TAF2Q6P1X5 1199 aa17.39■□□□□ 0.37
TREX1-201ENST00000433541 FAM173BQ6P4H8 233 aa17.39■□□□□ 0.37
TREX1-201ENST00000433541 FOXD4L3Q6VB84 417 aaPredicted RBP17.39■□□□□ 0.37
TREX1-201ENST00000433541 LRRC8DQ7L1W4 858 aa17.39■□□□□ 0.37
TREX1-201ENST00000433541 DEFB128Q7Z7B8 93 aa17.39■□□□□ 0.37
TREX1-201ENST00000433541 DHX38Q92620 1227 aaKnown RBP17.39■□□□□ 0.37
TREX1-201ENST00000433541 FTOQ9C0B1 505 aaKnown RBP eCLIP17.39■□□□□ 0.37
TREX1-201ENST00000433541 ZSWIM4Q9H7M6 989 aa17.39■□□□□ 0.37
TREX1-201ENST00000433541 LRWD1Q9UFC0 647 aa17.39■□□□□ 0.37
TREX1-201ENST00000433541 VWA3AA6NCI4 1184 aa17.38■□□□□ 0.37
TREX1-201ENST00000433541 ZSCAN22P10073 491 aaPredicted RBP17.38■□□□□ 0.37
TREX1-201ENST00000433541 HOXC8P31273 242 aa17.38■□□□□ 0.37
TREX1-201ENST00000433541 PRPHP41219 470 aa17.38■□□□□ 0.37
TREX1-201ENST00000433541 TBC1D8BQ0IIM8 1120 aa17.38■□□□□ 0.37
TREX1-201ENST00000433541 MTHFD1LQ6UB35 978 aa17.38■□□□□ 0.37
TREX1-201ENST00000433541 RUFY4Q6ZNE9 571 aa17.38■□□□□ 0.37
TREX1-201ENST00000433541 OTUD6AQ7L8S5 288 aa17.38■□□□□ 0.37
TREX1-201ENST00000433541 DNAJB3Q8WWF6 145 aa17.38■□□□□ 0.37
TREX1-201ENST00000433541 CTAGE1Q96RT6 745 aa17.38■□□□□ 0.37
TREX1-201ENST00000433541 SH2D3AQ9BRG2 576 aa17.38■□□□□ 0.37
TREX1-201ENST00000433541 WNT8AQ9H1J5 351 aa17.38■□□□□ 0.37
TREX1-201ENST00000433541 TMEM150BA6NC51 233 aa17.37■□□□□ 0.37
TREX1-201ENST00000433541 TMOD1P28289 359 aa17.37■□□□□ 0.37
TREX1-201ENST00000433541 CCT6AP40227 531 aaKnown RBP17.37■□□□□ 0.37
TREX1-201ENST00000433541 FXR2P51116 673 aaKnown RBP eCLIP17.37■□□□□ 0.37
TREX1-201ENST00000433541 ATP2C1P98194 919 aaPredicted RBP17.37■□□□□ 0.37
TREX1-201ENST00000433541 ZRSR1Q15695 479 aaKnown RBP17.37■□□□□ 0.37
TREX1-201ENST00000433541 XKR9Q5GH70 373 aa17.37■□□□□ 0.37
TREX1-201ENST00000433541 MARCH8Q5T0T0 291 aa17.37■□□□□ 0.37
TREX1-201ENST00000433541 ZNF618Q5T7W0 954 aa17.37■□□□□ 0.37
TREX1-201ENST00000433541 PLA2G4FQ68DD2 849 aa17.37■□□□□ 0.37
TREX1-201ENST00000433541 RPUSD2Q8IZ73 545 aaKnown RBP17.37■□□□□ 0.37
TREX1-201ENST00000433541 C4orf32Q8N8J7 132 aa17.37■□□□□ 0.37
TREX1-201ENST00000433541 SNX29Q8TEQ0 813 aa17.37■□□□□ 0.37
TREX1-201ENST00000433541 WNT8BQ93098 351 aa17.37■□□□□ 0.37
TREX1-201ENST00000433541 ZNF396Q96N95 335 aaPredicted RBP17.37■□□□□ 0.37
TREX1-201ENST00000433541 GDF15Q99988 308 aa17.37■□□□□ 0.37
TREX1-201ENST00000433541 SUGCTQ9HAC7 445 aa17.37■□□□□ 0.37
TREX1-201ENST00000433541 MBLAC1A4D2B0 266 aaPredicted RBP17.36■□□□□ 0.37
TREX1-201ENST00000433541 RSPH10B2B2RC85 870 aa17.36■□□□□ 0.37
TREX1-201ENST00000433541 MAGEB2O15479 319 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms